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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "El Sahili, A."

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Search Summary

This query matches 46 Structures.

Refinements

Structure Determination Methodology

experimental (46)

Scientific Name of Source Organism

	Agrobacterium fabrum str. C58 (8)
	Mycobacterium tuberculosis H37Rv (7)
	Clitoria ternatea (5)
	Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013 (5)
	dengue virus type 4 (5)
	Plasmodium falciparum 3D7 (4)
	Agrobacterium tumefaciens (2)
	Bos taurus (2)
	Homo sapiens (2)
	dengue virus type 3 (2)

More...

Taxonomy

	Bacteria (18)
	Eukaryota (17)
	Riboviria (14)

Experimental Method

X-RAY DIFFRACTION (46)

Polymer Entity Type

Protein (46)

Refinement Resolution (Å)

	1.0 - 1.5 (4)
	1.5 - 2.0 (17)
	2.0 - 2.5 (12)
	2.5 - 3.0 (9)
	3.0 - 3.5 (4)

Release Date

	2015 - 2019 (28)
	2020 - 2024 (18)

Enzyme Classification Name

	Transferases (14)
	Hydrolases (9)

Symmetry Type

	Asymmetric (32)
	Cyclic (8)
	Dihedral (7)

SCOP Classification

	Alpha and beta proteins (a+b) (1)
	Small proteins (2)

AllSelected

1 to 25 of 46 Structures

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4RA1 \| pdb_00004ra1	Download File View File

PBP AccA from A. tumefaciens C58 in complex with D-Glucose-2-phosphate

El Sahili, A., Morera, S.

(2015) PLoS Pathog 11: e1005071-e1005071

Released	2015-08-19
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Agrobacterium tumefaciens
Macromolecule	ABC transporter, substrate binding protein (Agrocinopines A and B) (protein)
Unique Ligands	ALX, BNX, EDO, PEG

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4ZA6 \| pdb_00004za6	Download File View File

Structure of the R. erythropolis transcriptional repressor QsdR from TetR family

El Sahili, A., Morera, S.

(2015) PLoS One 10: e0141718-e0141718

Released	2015-10-21
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Rhodococcus erythropolis
Macromolecule	TetR family transcriptional regulator (protein)
Unique Ligands	ACT, CA, MPD

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4ZE8 \| pdb_00004ze8	Download File View File

PBP AccA from A. tumefaciens C58

El Sahili, A., Morera, S.

(2015) PLoS Pathog 11: e1005071-e1005071

Released	2015-08-19
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Agrobacterium fabrum str. C58
Macromolecule	ABC transporter, substrate binding protein (Agrocinopines A and B) (protein)
Unique Ligands	EDO, GOL, PEG, SO4

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4ZE9 \| pdb_00004ze9	Download File View File

Se-PBP AccA from A. tumefaciens C58 in complex with agrocinopine A

El Sahili, A., Guimaraes, B.G., Morera, S.

(2015) PLoS Pathog 11: e1005071-e1005071

Released	2015-08-19
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Agrobacterium fabrum str. C58
Macromolecule	ABC transporter, substrate binding protein (Agrocinopines A and B) (protein)
Unique Ligands	ARA
Unique branched monosaccharides	4GL, TT7

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4ZEB \| pdb_00004zeb	Download File View File

PBP AccA from A. tumefaciens C58 in complex with agrocinopine A

El Sahili, A., Morera, S.

(2015) PLoS Pathog 11: e1005071-e1005071

Released	2015-08-19
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Agrobacterium fabrum str. C58
Macromolecule	ABC transporter, substrate binding protein (Agrocinopines A and B) (protein)
Unique Ligands	ARA, EDO, PEG
Unique branched monosaccharides	4GL, TT7

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4ZEC \| pdb_00004zec	Download File View File

PBP AccA from A. tumefaciens C58 in complex with agrocin 84

El Sahili, A., Morera, S.

(2015) PLoS Pathog 11: e1005071-e1005071

Released	2015-08-19
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Agrobacterium fabrum str. C58
Macromolecule	ABC transporter, substrate binding protein (Agrocinopines A and B) (protein)
Unique Ligands	C84, EDO, GOL, PEG

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4ZED \| pdb_00004zed	Download File View File

PBP AccA from A. tumefaciens C58 in complex with agrocinopine-3'-O-benzoate

El Sahili, A., Morera, S.

(2015) PLoS Pathog 11: e1005071-e1005071

Released	2015-08-19
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Agrobacterium fabrum str. C58
Macromolecule	ABC transporter, substrate binding protein (Agrocinopines A and B) (protein)
Unique Ligands	AGW, EDO

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4ZEI \| pdb_00004zei	Download File View File

PBP AccA from A. tumefaciens C58 in complex with L-arabinose-2-phosphate

El Sahili, A., Morera, S.

(2015) PLoS Pathog 11: e1005071-e1005071

Released	2015-08-19
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Agrobacterium fabrum str. C58
Macromolecule	ABC transporter, substrate binding protein (Agrocinopines A and B) (protein)
Unique Ligands	EDO, LAO

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4ZEK \| pdb_00004zek	Download File View File

PBP AccA from A. tumefaciens C58 in complex with L-arabinose-2-isopropylphosphate

El Sahili, A., Morera, S.

(2015) PLoS Pathog 11: e1005071-e1005071

Released	2015-08-19
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Agrobacterium fabrum str. C58
Macromolecule	ABC TRANSPORTER, SUBSTRATE BINDING PROTEIN (AGROCINOPINES A AND B) (protein)
Unique Ligands	EDO, LAH, PEG, TOE

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5FSW \| pdb_00005fsw	Download File View File

RNA dependent RNA polymerase QDE-1 from Thielavia terrestris

Qian, X., Hamid, F.M., El Sahili, A., Darwis, D.A., Wong, Y.H., Bhushan, S., Makeyev, E.V., Lescar, J.

(2016) J Biological Chem 291: 9295

Released	2016-03-02
Method	X-RAY DIFFRACTION 3.19 Å
Organisms	Thermothielavioides terrestris
Macromolecule	RNA DEPENDENT RNA POLYMERASE QDE-1 (protein)

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5JJR \| pdb_00005jjr	Download File View File

Dengue 3 NS5 protein with compound 29

Lescar, J., El Sahili, A.

(2016) PLoS Pathog 12: e1005737-e1005737

Released	2016-07-06
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	dengue virus type 3
Macromolecule	Genome polyprotein (protein)
Unique Ligands	68E, EDO, MG, PEG, SAH, ZN

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5JJS \| pdb_00005jjs	Download File View File

Dengue 3 NS5 protein with compound 27

Lescar, J., El Sahili, A.

(2016) PLoS Pathog 12: e1005737-e1005737

Released	2016-07-06
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	dengue virus type 3
Macromolecule	Genome polyprotein (protein)
Unique Ligands	6L2, EDO, MG, PEG, SAH, ZN

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5WRP \| pdb_00005wrp	Download File View File

T-state crystal structure of pyruvate kinase from Mycobacterium tuberculosis

Zhong, W., Cai, Q., El Sahili, A., Lescar, J., Dedon, P.C.

(2017) Nat Commun 8: 1986-1986

Released	2017-11-15
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Pyruvate kinase (protein)
Unique Ligands	PO4

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5WS8 \| pdb_00005ws8	Download File View File

Pyruvate kinase (PYK) from Mycobacterium tuberculosis in complex with Oxalate

Zhong, W., Cai, Q., El Sahili, A., Lescar, J., Dedon, P.C.

(2017) Nat Commun 8: 1986-1986

Released	2017-11-15
Method	X-RAY DIFFRACTION 2.62 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Pyruvate kinase (protein)
Unique Ligands	MG, OXL

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5WS9 \| pdb_00005ws9	Download File View File

Pyruvate kinase (PYK) from Mycobacterium tuberculosis in complex with Oxalate, ATP and allosteric activator AMP

Zhong, W., Cai, Q., El Sahili, A., Lescar, J., Dedon, P.C.

(2017) Nat Commun 8: 1986-1986

Released	2017-11-15
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Pyruvate kinase (protein)
Unique Ligands	AMP, ATP, K, MG, OXL, PO4

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5WSA \| pdb_00005wsa	Download File View File

Pyruvate kinase (PYK) from Mycobacterium tuberculosis in complex with Oxalate and allosteric activator Glucose 6-Phosphate

Zhong, W., Cai, Q., El Sahili, A., Lescar, J., Dedon, P.C.

(2017) Nat Commun 8: 1986-1986

Released	2017-11-15
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Pyruvate kinase (protein)
Unique Ligands	G6P, MG, OXL, PO4

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5WSB \| pdb_00005wsb	Download File View File

Pyruvate kinase (PYK) from Mycobacterium tuberculosis in complex with Oxalate, allosteric activators AMP and Glucose 6-Phosphate

Zhong, W., Cai, Q., El Sahili, A., Lescar, J., Dedon, P.C.

(2017) Nat Commun 8: 1986-1986

Released	2017-11-15
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Pyruvate kinase (protein)
Unique Ligands	AMP, G6P, K, MG, OXL, PO4

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5WSC \| pdb_00005wsc	Download File View File

Crystal of pyruvate kinase (PYK) from Mycobacterium tuberculosis in complex with Oxalate, soaked with allosteric activators AMP and Glucose 6-Phosphate

Zhong, W., Cai, Q., El Sahili, A., Lescar, J., Dedon, P.C.

(2017) Nat Commun 8: 1986-1986

Released	2017-11-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Pyruvate kinase (protein)
Unique Ligands	AMP, G6P, K, MG, OXL, PO4

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5XVU \| pdb_00005xvu	Download File View File

Crystal structure of the protein kinase CK2 catalytic domain from Plasmodium falciparum bound to ATP

El Sahili, A., Lescar, J., Ruiz-Carrillo, D., Lin, J.Q.

(2018) Sci Rep 8: 7365-7365

Released	2017-07-12
Method	X-RAY DIFFRACTION 3 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	Casein kinase 2, alpha subunit (protein)
Unique Ligands	ATP, CL, EDO, PEG, SO4

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5YVJ \| pdb_00005yvj	Download File View File

Crystal structure of full length NS2B47-NS3 (gD4NS2BNS3) from Dengue virus 4 in open conformation

Phoo, W.W., El Sahili, A.

To be published

Released	2018-11-28
Method	X-RAY DIFFRACTION 2.508 Å
Organisms	dengue virus type 4
Macromolecule	Genome polyprotein (protein)
Unique Ligands	GOL

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5YVU \| pdb_00005yvu	Download File View File

Crystal structures of unlinked full length NS3 from Dengue virus provide insights into dynamics of protease domain

Phoo, W.W., El Sahili, A.

To be published

Released	2018-11-28
Method	X-RAY DIFFRACTION 2.491 Å
Organisms	Bos taurus dengue virus type 4
Macromolecule	Genome polyprotein (protein) Pancreatic trypsin inhibitor (protein)
Unique Ligands	GOL

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5YVW \| pdb_00005yvw	Download File View File

Crystal structure of full length NS3 protein (eD4NS2BNS3) from DENV4 in closed conformation

PHOO, W.W., El Sahili, A.

To be published

Released	2018-12-05
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	dengue virus type 4
Macromolecule	Genome polyprotein (protein)
Unique Ligands	EPE

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5YVY \| pdb_00005yvy	Download File View File

Crystal structure of unlinked full length NS3 protein (eD4NS2BNS3) from DENV4 in closed conformation

PHOO, W.W., El Sahili, A.

To be published

Released	2018-11-28
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	dengue virus type 4
Macromolecule	Genome polyprotein (protein)

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5YW1 \| pdb_00005yw1	Download File View File

Crystal structure of full length NS3 protein (eD4NS2BNS3) in complex with Bovine Pancreatic Trypsin Inhibitor

Phoo, W.W., El Sahili, A.

To be published

Released	2019-01-02
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Bos taurus dengue virus type 4
Macromolecule	FLAVIVIRUS_NS2B (protein) PTI protein (protein) Peptidase S7 (protein)

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5ZQK \| pdb_00005zqk	Download File View File

Dengue Virus Non Structural Protein 5

El Sahili, A., Soh, T.S., Schiltz, J., Gharbi-Ayachi, A., Goh, B.C., Seh, C.C., Dedon, P.C., Shi, P.Y., Lim, S.P., Lescar, J.

(2019) J Virol 94:

Released	2019-06-12
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	dengue virus type 2
Macromolecule	Non Structural Protein 5 (protein)
Unique Ligands	EDO, GOL, MG, SAM, ZN

1 to 25 of 46 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

4RA1 | pdb_00004ra1

4ZA6 | pdb_00004za6

4ZE8 | pdb_00004ze8

4ZE9 | pdb_00004ze9

4ZEB | pdb_00004zeb

4ZEC | pdb_00004zec

4ZED | pdb_00004zed

4ZEI | pdb_00004zei

4ZEK | pdb_00004zek

5FSW | pdb_00005fsw

5JJR | pdb_00005jjr

5JJS | pdb_00005jjs

5WRP | pdb_00005wrp

5WS8 | pdb_00005ws8

5WS9 | pdb_00005ws9

5WSA | pdb_00005wsa

5WSB | pdb_00005wsb

5WSC | pdb_00005wsc

5XVU | pdb_00005xvu

5YVJ | pdb_00005yvj

5YVU | pdb_00005yvu

5YVW | pdb_00005yvw

5YVY | pdb_00005yvy

5YW1 | pdb_00005yw1

5ZQK | pdb_00005zqk