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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Koepke, J."

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Search Summary

This query matches 44 Structures.

Refinements

Structure Determination Methodology

experimental (44)

Scientific Name of Source Organism

	Cereibacter sphaeroides (14)
	Loligo vulgaris (13)
	Mus musculus (3)
	Rauvolfia serpentina (3)
	Thermus thermophilus (3)
	Brevibacillus parabrevis (2)
	Paracoccus denitrificans (2)
	Streptomyces avidinii (2)
	Aspergillus oryzae (1)
	Bacillus subtilis subsp. subtilis str. 168 (1)

More...

Taxonomy

	Bacteria (24)
	Eukaryota (21)
	Archaea (1)

Experimental Method

	X-RAY DIFFRACTION (43)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (44)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (2)
	1.5 - 2.0 (9)
	2.0 - 2.5 (19)
	2.5 - 3.0 (10)
	3.0 - 3.5 (1)

Release Date

	1985 - 1989 (1)
	1995 - 1999 (3)
	2000 - 2004 (4)
	2005 - 2009 (29)
	2010 - 2014 (4)
	2015 - 2019 (3)

Enzyme Classification Name

	Hydrolases (17)
	Oxidoreductases (6)
	Translocases (3)
	Transferases (2)
	Lyases (1)

Membrane Protein Annotation

	PDBTM (19)
	MemProtMD (17)
	OPM (6)
	mpstruc (3)

Symmetry Type

	Asymmetric (35)
	Cyclic (5)
	Dihedral (4)

SCOP Classification

	Membrane and cell surface proteins and peptides (18)
	All beta proteins (33)
	Alpha and beta proteins (a/b) (3)
	Alpha and beta proteins (a+b) (3)
	All alpha proteins (3)
	Artifacts (2)
	Small proteins (1)

AllSelected

1 to 25 of 44 Structures

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1D6R \| pdb_00001d6r	Download File View File

CRYSTAL STRUCTURE OF CANCER CHEMOPREVENTIVE BOWMAN-BIRK INHIBITOR IN TERNARY COMPLEX WITH BOVINE TRYPSIN AT 2.3 A RESOLUTION. STRUCTURAL BASIS OF JANUS-FACED SERINE PROTEASE INHIBITOR SPECIFICITY

Koepke, J., Ermler, U., Wenzl, G., Flecker, P.

(2000) J Mol Biology 298: 477-491

Released	2000-05-05
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Bos taurus Glycine max
Macromolecule	BOWMAN-BIRK PROTEINASE INHIBITOR PRECURSOR (protein) TRYPSINOGEN (protein)

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1E1A \| pdb_00001e1a	Download File View File

Crystal structure of DFPase from Loligo vulgaris

Koepke, J., Scharff, E.I., Fritzsch, G., Luecke, C., Rueterjans, H.

(2001) Structure 9: 493

Released	2001-06-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Loligo vulgaris
Macromolecule	DIISOPROPYLFLUOROPHOSPHATASE (protein)
Unique Ligands	CA

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1EZV \| pdb_00001ezv	Download File View File

STRUCTURE OF THE YEAST CYTOCHROME BC1 COMPLEX CO-CRYSTALLIZED WITH AN ANTIBODY FV-FRAGMENT

Hunte, C., Koepke, J., Lange, C., Rossmanith, T., Michel, H.

(2000) Structure 8: 669-684

Released	2001-05-16
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mus musculus Saccharomyces cerevisiae
Macromolecule	Unique protein chains: 11
Unique Ligands	FES, HEM, SMA, UQ6

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1LGH \| pdb_00001lgh	Download File View File

CRYSTAL STRUCTURE OF THE LIGHT-HARVESTING COMPLEX II (B800-850) FROM RHODOSPIRILLUM MOLISCHIANUM

Koepke, J., Hu, X., Schulten, K., Michel, H.

(1996) Structure 4: 581-597

Released	1997-06-05
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Magnetospirillum molischianum
Macromolecule	LIGHT HARVESTING COMPLEX II (protein)
Unique Ligands	BCL, DET, HTO, LYC

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1PJX \| pdb_00001pjx	Download File View File

0.85 ANGSTROM STRUCTURE OF SQUID GANGLION DFPASE

Koepke, J., Rueterjans, H., Luecke, C., Fritzsch, G.

(2003) Acta Crystallogr D Biol Crystallogr 59: 1744-1754

Released	2004-06-08
Method	X-RAY DIFFRACTION 0.85 Å
Organisms	Loligo vulgaris
Macromolecule	DIISOPROPYLFLUOROPHOSPHATASE (protein)
Unique Ligands	CA, DXE, EDO, GOL, ME2, MES, MXE, PEG, PGE

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1RST \| pdb_00001rst	Download File View File

COMPLEX BETWEEN STREPTAVIDIN AND THE STREP-TAG PEPTIDE

Koepke, J., Schmidt, T., Skerra, A.

(1996) J Mol Biology 255: 753-766

Released	1997-05-15
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Streptomyces avidinii
Macromolecule	STREP-TAG PEPTIDE (protein) STREPTAVIDIN (protein)

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1RSU \| pdb_00001rsu	Download File View File

COMPLEX BETWEEN STREPTAVIDIN AND THE STREP-TAG II PEPTIDE

Koepke, J., Schmidt, T., Skerra, A.

(1996) J Mol Biology 255: 753-766

Released	1997-05-15
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Streptomyces avidinii
Macromolecule	STREP-TAG II PEPTIDE (protein) STREPTAVIDIN (protein)

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2BGH \| pdb_00002bgh	Download File View File

Crystal structure of Vinorine Synthase

Ma, X., Koepke, J., Panjikar, S., Fritzsch, G., Stoeckigt, J.

(2005) J Biological Chem 280: 13576

Released	2005-01-24
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Rauvolfia serpentina
Macromolecule	VINORINE SYNTHASE (protein)

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2IAO \| pdb_00002iao	Download File View File

Crystal structure of squid ganglion DFPase E37Q mutant

Scharff, E.I., Koepke, J., Fritzsch, G., Luecke, C., Rueterjans, H.

(2001) Structure 9: 493-502

Released	2006-09-26
Method	X-RAY DIFFRACTION 2 Å
Organisms	Loligo vulgaris
Macromolecule	DIISOPROPYLFLUOROPHOSPHATASE (protein)
Unique Ligands	CA

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2IAP \| pdb_00002iap	Download File View File

Crystal structure of squid ganglion DFPase E21Q mutant

Scharff, E.I., Koepke, J., Fritzsch, G., Luecke, C., Rueterjans, H.

(2001) Structure 9: 493-502

Released	2006-09-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Loligo vulgaris
Macromolecule	Diisopropylfluorophosphatase (protein)
Unique Ligands	CA

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2IAQ \| pdb_00002iaq	Download File View File

Crystal structure of squid ganglion DFPase S271A mutant

Scharff, E.I., Koepke, J., Fritzsch, G., Luecke, C., Rueterjans, H.

(2001) Structure 9: 493-502

Released	2006-09-26
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Loligo vulgaris
Macromolecule	Diisopropylfluorophosphatase (protein)
Unique Ligands	CA

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2IAR \| pdb_00002iar	Download File View File

Crystal structure of squid ganglion DFPase W244H mutant

Scharff, E.I., Koepke, J., Fritzsch, G., Luecke, C., Rueterjans, H.

(2001) Structure 9: 493-502

Released	2006-09-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Loligo vulgaris
Macromolecule	Diisopropylfluorophosphatase (protein)
Unique Ligands	CA

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2IAS \| pdb_00002ias	Download File View File

Crystal structure of squid ganglion DFPase W244F mutant

Scharff, E.I., Koepke, J., Fritzsch, G., Luecke, C., Rueterjans, H.

(2001) Structure 9: 493-502

Released	2006-09-26
Method	X-RAY DIFFRACTION 2 Å
Organisms	Loligo vulgaris
Macromolecule	Diisopropylfluorophosphatase (protein)
Unique Ligands	CA

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2IAT \| pdb_00002iat	Download File View File

Crystal structure of squid ganglion DFPase W244L mutant

Scharff, E.I., Koepke, J., Fritzsch, G., Luecke, C., Rueterjans, H.

(2001) Structure 9: 493-502

Released	2006-09-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Loligo vulgaris
Macromolecule	Diisopropylfluorophosphatase (protein)
Unique Ligands	CA

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2IAU \| pdb_00002iau	Download File View File

Crystal structure of squid ganglion DFPase W244Y mutant

Scharff, E.I., Koepke, J., Fritzsch, G., Luecke, C., Rueterjans, H.

(2001) Structure 9: 493-502

Released	2006-09-26
Method	X-RAY DIFFRACTION 2 Å
Organisms	Loligo vulgaris
Macromolecule	Diisopropylfluorophosphatase (protein)
Unique Ligands	CA

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2IAV \| pdb_00002iav	Download File View File

Crystal structure of squid ganglion DFPase H287A mutant

Katsemi, V., Luecke, C., Koepke, J., Loehr, F., Maurer, S., Fritzsch, G., Rueterjans, H.

(2005) Biochemistry 44: 9022-9033

Released	2006-09-26
Method	X-RAY DIFFRACTION 1.07 Å
Organisms	Loligo vulgaris
Macromolecule	Diisopropylfluorophosphatase (protein)
Unique Ligands	CA

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2IAW \| pdb_00002iaw	Download File View File

Crystal structure of squid ganglion DFPase N175D mutant

Katsemi, V., Luecke, C., Koepke, J., Loehr, F., Maurer, S., Fritzsch, G., Rueterjans, H.

(2005) Biochemistry 44: 9022-9033

Released	2006-09-26
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Loligo vulgaris
Macromolecule	Diisopropylfluorophosphatase (protein)
Unique Ligands	CA

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2IAX \| pdb_00002iax	Download File View File

Crystal structure of squid ganglion DFPase D232S mutant

Katsemi, V., Luecke, C., Koepke, J., Loehr, F., Maurer, S., Fritzsch, G., Rueterjans, H.

(2005) Biochemistry 44: 9022-9033

Released	2006-09-26
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Loligo vulgaris
Macromolecule	Diisopropylfluorophosphatase (protein)
Unique Ligands	CA

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2J8C \| pdb_00002j8c	Download File View File

X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 8 in the neutral state

Koepke, J., Diehm, R., Fritzsch, G.

(2007) J Mol Biology 371: 396

Released	2007-07-03
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Cereibacter sphaeroides
Macromolecule	REACTION CENTER PROTEIN H CHAIN (protein) REACTION CENTER PROTEIN L CHAIN (protein) REACTION CENTER PROTEIN M CHAIN (protein)
Unique Ligands	BCL, BPH, CDL, FE, GGD, GOL, HTO, LDA, PC1, PO4, SPO, U10

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2J8D \| pdb_00002j8d	Download File View File

X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 8 in the charge-separated state

Koepke, J., Diehm, R., Fritzsch, G.

(2007) J Mol Biology 371: 396

Released	2007-07-03
Method	X-RAY DIFFRACTION 2.07 Å
Organisms	Cereibacter sphaeroides
Macromolecule	REACTION CENTER PROTEIN H CHAIN (protein) REACTION CENTER PROTEIN L CHAIN (protein) REACTION CENTER PROTEIN M CHAIN (protein)
Unique Ligands	BCL, BPH, CDL, FE, GOL, HTO, LDA, PO4, SPO, U10

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2JF6 \| pdb_00002jf6	Download File View File

Structure of inactive mutant of Strictosidine Glucosidase in complex with strictosidine

Barleben, L., Panjikar, S., Ruppert, M., Koepke, J., Stockigt, J.

(2007) Plant Cell 19: 2886

Released	2008-02-05
Method	X-RAY DIFFRACTION 2.82 Å
Organisms	Rauvolfia serpentina
Macromolecule	STRICTOSIDINE-O-BETA-D-GLUCOSIDASE (protein)
Unique Ligands	S55

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2JF7 \| pdb_00002jf7	Download File View File

Structure of Strictosidine Glucosidase

Barleben, L., Panjikar, S., Ruppert, M., Koepke, J., Stockigt, J.

(2007) Plant Cell 19: 2886

Released	2008-02-05
Method	X-RAY DIFFRACTION 2.48 Å
Organisms	Rauvolfia serpentina
Macromolecule	STRICTOSIDINE-O-BETA-D-GLUCOSIDASE (protein)

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2MD9 \| pdb_00002md9	Download File View File

Solution Structure of an Active Site Mutant Pepitdyl Carrier Protein

Tufar, P., Rahighi, S., Kraas, F.I., Kirchner, D.K., Loehr, F., Henrich, E., Koepke, J., Dikic, I., Guentert, P., Marahiel, M.A., Doetsch, V.

(2014) Chem Biol 21: 552-562

Released	2014-04-23
Method	SOLUTION NMR
Organisms	Brevibacillus parabrevis
Macromolecule	Tyrocidine synthase 3 (protein)

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2RNT \| pdb_00002rnt	Download File View File

THREE-DIMENSIONAL STRUCTURE OF RIBONUCLEASE T1 COMPLEXED WITH GUANYLYL-2(PRIME),5(PRIME)-GUANOSINE AT 1.8 ANGSTROMS RESOLUTION

Saenger, W., Koepke, J., Maslowska, M., Heinemann, U.

(1989) J Mol Biology 206: 475-488

Released	1989-10-15
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Aspergillus oryzae
Macromolecule	RIBONUCLEASE T1 (protein)
Unique Ligands	CA, GPG

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2UWS \| pdb_00002uws	Download File View File

X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 6.5 in the charge-separated state

Koepke, J., Diehm, R., Fritzsch, G.

(2007) J Mol Biology 371: 396

Released	2007-07-03
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Cereibacter sphaeroides
Macromolecule	REACTION CENTER PROTEIN H CHAIN (protein) REACTION CENTER PROTEIN L CHAIN (protein) REACTION CENTER PROTEIN M CHAIN (protein)
Unique Ligands	BCL, BPH, FE, GOL, LDA, PO4, SPO, U10, UQ2

1 to 25 of 44 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1D6R | pdb_00001d6r

1E1A | pdb_00001e1a

1EZV | pdb_00001ezv

1LGH | pdb_00001lgh

1PJX | pdb_00001pjx

1RST | pdb_00001rst

1RSU | pdb_00001rsu

2BGH | pdb_00002bgh

2IAO | pdb_00002iao

2IAP | pdb_00002iap

2IAQ | pdb_00002iaq

2IAR | pdb_00002iar

2IAS | pdb_00002ias

2IAT | pdb_00002iat

2IAU | pdb_00002iau

2IAV | pdb_00002iav

2IAW | pdb_00002iaw

2IAX | pdb_00002iax

2J8C | pdb_00002j8c

2J8D | pdb_00002j8d

2JF6 | pdb_00002jf6

2JF7 | pdb_00002jf7

2MD9 | pdb_00002md9

2RNT | pdb_00002rnt

2UWS | pdb_00002uws