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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Kowal, J."

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Search Summary

This query matches 52 Structures.

Refinements

Structure Determination Methodology

experimental (52)

Scientific Name of Source Organism

	Homo sapiens (32)
	Mus musculus (12)
	Mesorhizobium japonicum MAFF 303099 (10)
	Lama glama (3)
	Saccharomyces cerevisiae (3)
	synthetic construct (3)
	Mesorhizobium loti (2)
	Saccharomyces cerevisiae S288C (2)
	Staphylococcus capitis (2)
	Vibrio cholerae RC385 (1)

Taxonomy

	Eukaryota (40)
	Bacteria (15)
	other sequences (3)

Experimental Method

	ELECTRON MICROSCOPY (48)
	ELECTRON CRYSTALLOGRAPHY (3)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (52)

Refinement Resolution (Å)

	2.0 - 2.5 (1)
	2.5 - 3.0 (5)
	3.0 - 3.5 (19)
	3.5 - 4.0 (12)
	4.0 - 4.5 (3)
	> 4.5 (11)

Release Date

	2010 - 2014 (2)
	2015 - 2019 (24)
	2020 - 2024 (26)

Enzyme Classification Name

	Translocases (26)
	Transferases (8)

Membrane Protein Annotation

	PDBTM (50)
	OPM (31)
	MemProtMD (36)
	mpstruc (26)

Symmetry Type

	Cyclic (36)
	Asymmetric (16)

SCOP Classification

	All beta proteins (2)
	Artifacts (2)

AllSelected

1 to 25 of 52 Structures

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2N5E \| pdb_00002n5e	Download File View File

The 3D solution structure of discoidal high-density lipoprotein particles

Bibow, S., Polyhach, Y., Eichmann, C., Chi, C.N., Kowal, J., Stahlberg, H., Jeschke, G., Guentert, P., Riek, R.

(2017) Nat Struct Mol Biol 24: 187-193

Released	2016-12-21
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Apolipoprotein A-I (protein)

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4CHV \| pdb_00004chv	Download File View File

The electron crystallography structure of the cAMP-bound potassium channel MloK1

Kowal, J., Chami, M., Baumgartner, P., Arheit, M., Chiu, P.L., Rangl, M., Scheuring, S., Schroeder, G.F., Nimigean, C.M., Stahlberg, H.

(2014) Nat Commun 5: 3106

Released	2014-01-15
Method	ELECTRON CRYSTALLOGRAPHY 7 Å
Organisms	Mesorhizobium loti
Macromolecule	CYCLIC NUCLEOTIDE-GATED POTASSIUM CHANNEL MLL3241 (protein)
Unique Ligands	K

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4CHW \| pdb_00004chw	Download File View File

The electron crystallography structure of the cAMP-free potassium channel MloK1

Kowal, J., Chami, M., Baumgartner, P., Arheit, M., Chiu, P.L., Rangl, M., Scheuring, S., Schroeder, G.F., Nimigean, C.M., Stahlberg, H.

(2014) Nat Commun 5: 3106-3106

Released	2014-01-15
Method	ELECTRON CRYSTALLOGRAPHY 7 Å
Organisms	Mesorhizobium loti
Macromolecule	CYCLIC NUCLEOTIDE-GATED POTASSIUM CHANNEL MLL3241 (protein)
Unique Ligands	K

Explore in 3D

5NJ3 \| pdb_00005nj3	Download File View File

Structure of an ABC transporter: complete structure

Taylor, N.M.I., Manolaridis, I., Jackson, S.M., Kowal, J., Stahlberg, H., Locher, K.P.

(2017) Nature 546: 504-509

Released	2017-06-07
Method	ELECTRON MICROSCOPY 3.78 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	5D3-Fab heavy chain (protein) 5D3-Fab light chain (protein) ATP-binding cassette sub-family G member 2 (protein)
Unique branched monosaccharides	NAG

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5NJG \| pdb_00005njg	Download File View File

Structure of an ABC transporter: part of the structure that could be built de novo

Taylor, N.M.I., Manolaridis, I., Jackson, S.M., Kowal, J., Stahlberg, H., Locher, K.P.

(2017) Nature 546: 504-509

Released	2017-06-07
Method	ELECTRON MICROSCOPY 3.78 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	5D3-Fab heavy chain (protein) 5D3-Fab light chain (protein) ATP-binding cassette sub-family G member 2 (protein)
Unique branched monosaccharides	NAG

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6EO1 \| pdb_00006eo1	Download File View File

The electron crystallography structure of the cAMP-bound potassium channel MloK1 (PCO-refined)

Kowal, J., Biyani, N., Chami, M., Scherer, S., Rzepiela, A., Baumgartner, P., Upadhyay, V., Nimigean, C., Stahlberg, H.

(2018) Structure 26: 20-27.e3

Released	2017-12-27
Method	ELECTRON CRYSTALLOGRAPHY 4.5 Å
Organisms	Mesorhizobium japonicum MAFF 303099
Macromolecule	Cyclic nucleotide-gated potassium channel mll3241 (protein)
Unique Ligands	K

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6ETI \| pdb_00006eti	Download File View File

Structure of inhibitor-bound ABCG2

Jackson, S.M., Manolaridis, I., Kowal, J., Zechner, M., Altmann, K.H., Locher, K.P.

(2018) Nat Struct Mol Biol 25: 333-340

Released	2018-04-11
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	5D3(Fab) heavy chain variable domain (protein) 5D3(Fab) light chain variable domain (protein) ATP-binding cassette sub-family G member 2 (protein)
Unique Ligands	BWQ
Unique branched monosaccharides	NAG

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6EZN \| pdb_00006ezn	Download File View File

Cryo-EM structure of the yeast oligosaccharyltransferase (OST) complex

Wild, R., Kowal, J., Eyring, J., Ngwa, E.M., Aebi, M., Locher, K.P.

(2018) Science 359: 545-550

Released	2018-01-17
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Unique protein chains: 8
Unique Ligands	CPL, NAG, PTY
Unique branched monosaccharides	BMA, MAN, NAG

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6FEQ \| pdb_00006feq	Download File View File

Structure of inhibitor-bound ABCG2

Jackson, S.M., Manolaridis, I., Kowal, J., Zechner, M., Altmann, K.H., Locher, K.P.

(2018) Nat Struct Mol Biol 25: 333-340

Released	2018-04-11
Method	ELECTRON MICROSCOPY 3.6 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	5D3(Fab) heavy chain variable domain (protein) 5D3(Fab) light chain variable domain (protein) ATP-binding cassette sub-family G member 2 (protein)
Unique Ligands	D6T, NAG

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6FFC \| pdb_00006ffc	Download File View File

Structure of an inhibitor-bound ABC transporter

Jackson, S.M., Manolaridis, I., Kowal, J., Zechner, M., Taylor, N.M.I., Bause, M., Bauer, S., Bartholomaeus, R., Stahlberg, H., Bernhardt, G., Koenig, B., Buschauer, A., Altmann, K.H., Locher, K.P.

(2018) Nat Struct Mol Biol 25: 333-340

Released	2018-04-11
Method	ELECTRON MICROSCOPY 3.56 Å
Organisms	Homo sapiens
Macromolecule	ATP-binding cassette sub-family G member 2 (protein)
Unique Ligands	BWQ

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6HBU \| pdb_00006hbu	Download File View File

Cryo-EM structure of the ABCG2 E211Q mutant bound to ATP and Magnesium

Manolaridis, I., Jackson, S.M., Taylor, N.M.I., Kowal, J., Stahlberg, H., Locher, K.P.

(2018) Nature 563: 426-430

Released	2018-11-07
Method	ELECTRON MICROSCOPY 3.09 Å
Organisms	Homo sapiens
Macromolecule	ATP-binding cassette sub-family G member 2 (protein)
Unique Ligands	ATP, MG

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6HCO \| pdb_00006hco	Download File View File

Cryo-EM structure of the ABCG2 E211Q mutant bound to estrone 3-sulfate and 5D3-Fab

Manolaridis, I., Jackson, S.M., Taylor, N.M.I., Kowal, J., Stahlberg, H., Locher, K.P.

(2018) Nature 563: 426-430

Released	2018-11-07
Method	ELECTRON MICROSCOPY 3.58 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	5D3-Fab heavy chain (protein) 5D3-Fab light chain (protein) ATP-binding cassette sub-family G member 2 (protein)
Unique Ligands	FY5
Unique branched monosaccharides	NAG

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6HIJ \| pdb_00006hij	Download File View File

Cryo-EM structure of the human ABCG2-MZ29-Fab complex with cholesterol and PE lipids docked

Jackson, S.M., Manolaridis, I., Kowal, J., Zechner, M., Taylor, N.M.I., Bause, M., Bauer, S., Bartholomaeus, R., Stahlberg, H., Bernhardt, G., Koenig, B., Buschauer, A., Altmann, K.H., Locher, K.P.

(2018) Nat Struct Mol Biol 25: 333-340

Released	2018-09-19
Method	ELECTRON MICROSCOPY 3.56 Å
Organisms	Homo sapiens
Macromolecule	ATP-binding cassette sub-family G member 2 (protein)
Unique Ligands	BWQ, CLR, PEE

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6HZM \| pdb_00006hzm	Download File View File

Cryo-EM structure of the ABCG2 E211Q mutant bound to ATP and Magnesium (alternative placement of Magnesium into the cryo-EM density)

Manolaridis, I., Jackson, S.M., Taylor, N.M.I., Kowal, J., Stahlberg, H., Locher, K.P.

(2018) Nature 563: 426-430

Released	2018-11-14
Method	ELECTRON MICROSCOPY 3.09 Å
Organisms	Homo sapiens
Macromolecule	ATP-binding cassette sub-family G member 2 (protein)
Unique Ligands	ATP, MG

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6I9D \| pdb_00006i9d	Download File View File

MloK1 consensus structure from single particle analysis of 2D crystals

Righetto, R., Biyani, N., Kowal, J., Chami, M., Stahlberg, H.

(2019) Nat Commun 10: 1722-1722

Released	2019-04-24
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Mesorhizobium japonicum MAFF 303099
Macromolecule	Cyclic nucleotide-gated potassium channel mll3241 (protein)
Unique Ligands	K

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6IAX \| pdb_00006iax	Download File View File

MloK1 model from single particle analysis of 2D crystals, class 1 (extended conformation)

Righetto, R., Biyani, N., Kowal, J., Chami, M., Stahlberg, H.

(2019) Nat Commun 10: 1722-1722

Released	2019-04-24
Method	ELECTRON MICROSCOPY 5.2 Å
Organisms	Mesorhizobium japonicum MAFF 303099
Macromolecule	Cyclic nucleotide-gated potassium channel mll3241 (protein)
Unique Ligands	K

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6QCY \| pdb_00006qcy	Download File View File

MloK1 model from single particle analysis of 2D crystals, class 2 (intermediate conformation)

Righetto, R., Biyani, N., Kowal, J., Chami, M., Stahlberg, H.

(2019) Nat Commun 10: 1722-1722

Released	2019-04-24
Method	ELECTRON MICROSCOPY 4.7 Å
Organisms	Mesorhizobium japonicum MAFF 303099
Macromolecule	Cyclic nucleotide-gated potassium channel mll3241 (protein)
Unique Ligands	K

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6QCZ \| pdb_00006qcz	Download File View File

MloK1 model from single particle analysis of 2D crystals, class 3 (intermediate extended conformation)

Righetto, R., Biyani, N., Kowal, J., Chami, M., Stahlberg, H.

(2019) Nat Commun 10: 1722-1722

Released	2019-04-24
Method	ELECTRON MICROSCOPY 4.4 Å
Organisms	Mesorhizobium japonicum MAFF 303099
Macromolecule	Cyclic nucleotide-gated potassium channel mll3241 (protein)
Unique Ligands	K

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6QD0 \| pdb_00006qd0	Download File View File

MloK1 model from single particle analysis of 2D crystals, class 4 (compact/open conformation)

Righetto, R., Biyani, N., Kowal, J., Chami, M., Stahlberg, H.

(2019) Nat Commun 10: 1722-1722

Released	2019-04-24
Method	ELECTRON MICROSCOPY 4.5 Å
Organisms	Mesorhizobium japonicum MAFF 303099
Macromolecule	Cyclic nucleotide-gated potassium channel mll3241 (protein)
Unique Ligands	K

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6QD1 \| pdb_00006qd1	Download File View File

MloK1 model from single particle analysis of 2D crystals, class 5 (intermediate compact conformation)

Righetto, R., Biyani, N., Kowal, J., Chami, M., Stahlberg, H.

(2019) Nat Commun 10: 1722-1722

Released	2019-04-24
Method	ELECTRON MICROSCOPY 5.4 Å
Organisms	Mesorhizobium japonicum MAFF 303099
Macromolecule	Cyclic nucleotide-gated potassium channel mll3241 (protein)
Unique Ligands	K

Explore in 3D

6QD2 \| pdb_00006qd2	Download File View File

MloK1 model from single particle analysis of 2D crystals, class 6 (intermediate compact conformation)

Righetto, R., Biyani, N., Kowal, J., Chami, M., Stahlberg, H.

(2019) Nat Commun 10: 1722-1722

Released	2019-04-24
Method	ELECTRON MICROSCOPY 4.8 Å
Organisms	Mesorhizobium japonicum MAFF 303099
Macromolecule	Cyclic nucleotide-gated potassium channel mll3241 (protein)
Unique Ligands	K

Explore in 3D

6QD3 \| pdb_00006qd3	Download File View File

MloK1 model from single particle analysis of 2D crystals, class 7 (intermediate conformation)

Righetto, R., Biyani, N., Kowal, J., Chami, M., Stahlberg, H.

(2019) Nat Commun 10: 1722-1722

Released	2019-04-24
Method	ELECTRON MICROSCOPY 5 Å
Organisms	Mesorhizobium japonicum MAFF 303099
Macromolecule	Cyclic nucleotide-gated potassium channel mll3241 (protein)
Unique Ligands	K

Explore in 3D

6QD4 \| pdb_00006qd4	Download File View File

MloK1 model from single particle analysis of 2D crystals, class 8 (intermediate conformation)

Righetto, R., Biyani, N., Kowal, J., Chami, M., Stahlberg, H.

(2019) Nat Commun 10: 1722-1722

Released	2019-04-24
Method	ELECTRON MICROSCOPY 5.6 Å
Organisms	Mesorhizobium japonicum MAFF 303099
Macromolecule	Cyclic nucleotide-gated potassium channel mll3241 (protein)
Unique Ligands	K

Explore in 3D

6S7O \| pdb_00006s7o	Download File View File

Cryo-EM structure of human oligosaccharyltransferase complex OST-A

Ramirez, A.S., Kowal, J., Locher, K.P.

(2019) Science 366: 1372-1375

Released	2019-12-18
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Homo sapiens
Macromolecule	Unique protein chains: 8
Unique Ligands	EGY, KZB, KZE, MG
Unique branched monosaccharides	BMA, MAN, NAG

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6S7P \| pdb_00006s7p	Download File View File

Nucleotide bound ABCB4

Olsen, J.A., Alam, A., Kowal, J., Stieger, B., Locher, K.P.

(2020) Nat Struct Mol Biol 27: 62-70

Released	2019-12-25
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylcholine translocator ABCB4 (protein)
Unique Ligands	ATP, CLR, MG

1 to 25 of 52 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2N5E | pdb_00002n5e

4CHV | pdb_00004chv

4CHW | pdb_00004chw

5NJ3 | pdb_00005nj3

5NJG | pdb_00005njg

6EO1 | pdb_00006eo1

6ETI | pdb_00006eti

6EZN | pdb_00006ezn

6FEQ | pdb_00006feq

6FFC | pdb_00006ffc

6HBU | pdb_00006hbu

6HCO | pdb_00006hco

6HIJ | pdb_00006hij

6HZM | pdb_00006hzm

6I9D | pdb_00006i9d

6IAX | pdb_00006iax

6QCY | pdb_00006qcy

6QCZ | pdb_00006qcz

6QD0 | pdb_00006qd0

6QD1 | pdb_00006qd1

6QD2 | pdb_00006qd2

6QD3 | pdb_00006qd3

6QD4 | pdb_00006qd4

6S7O | pdb_00006s7o

6S7P | pdb_00006s7p