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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Naylor, C.E."

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Search Summary

This query matches 52 Structures.

Refinements

Structure Determination Methodology

experimental (52)

Scientific Name of Source Organism

	Magnetococcus marinus MC-1 (19)
	Clostridium perfringens (11)
	Homo sapiens (5)
	Leuconostoc mesenteroides (5)
	Staphylococcus aureus (2)
	Yersinia pseudotuberculosis (2)
	Bos taurus (1)
	Clostridium perfringens B (1)
	Clostridium perfringens D (1)
	Clostridium perfringens NCTC 8239 (1)

More...

Taxonomy

	Bacteria (43)
	Eukaryota (10)

Experimental Method

	X-RAY DIFFRACTION (50)
	ELECTRON MICROSCOPY (2)

Polymer Entity Type

Protein (52)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (1)
	1.5 - 2.0 (4)
	2.0 - 2.5 (11)
	2.5 - 3.0 (18)
	3.0 - 3.5 (13)
	3.5 - 4.0 (2)
	4.0 - 4.5 (1)

Release Date

	1995 - 1999 (4)
	2000 - 2004 (7)
	2005 - 2009 (5)
	2010 - 2014 (26)
	2015 - 2019 (9)
	2020 - 2024 (1)

Enzyme Classification Name

	Oxidoreductases (8)
	Hydrolases (6)
	Lyases (1)

Membrane Protein Annotation

	PDBTM (21)
	MemProtMD (18)
	mpstruc (18)
	OPM (8)

Symmetry Type

	Cyclic (38)
	Asymmetric (14)
	Dihedral (1)

SCOP Classification

	All beta proteins (12)
	Membrane and cell surface proteins and peptides (5)
	Artifacts (4)
	Alpha and beta proteins (a+b) (7)
	All alpha proteins (6)
	Alpha and beta proteins (a/b) (6)

AllSelected

1 to 25 of 52 Structures

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1CA1 \| pdb_00001ca1	Download File View File

ALPHA-TOXIN FROM CLOSTRIDIUM PERFRINGENS

Naylor, C.E., Basak, A.K., Titball, R.W.

(1998) Nat Struct Biol 5: 738-746

Released	1999-05-04
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Clostridium perfringens
Macromolecule	ALPHA-TOXIN (protein)
Unique Ligands	CD, ZN

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1H93 \| pdb_00001h93	Download File View File

ACTIVE MUTANT (S215->C) OF GLUCOSE 6-PHOSPHATE DEHYDROGENASE FROM LEUCONOSTOC MESENTEROIDES

Adams, M.J., Naylor, C.E., Gover, S.

(2001) Acta Crystallogr D Biol Crystallogr 57: 635

Released	2001-05-03
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Leuconostoc mesenteroides
Macromolecule	GLUCOSE 6-PHOSPHATE 1-DEHYDROGENASE (protein)
Unique Ligands	CA, GOL

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1H94 \| pdb_00001h94	Download File View File

COMPLEX OF ACTIVE MUTANT (S215->C) OF GLUCOSE 6-PHOSPHATE DEHYDROGENASE FROM L.MESENTEROIDES WITH COENZYME NAD

Adams, M.J., Naylor, C.E., Gover, S.

(2001) Acta Crystallogr D Biol Crystallogr 57: 635

Released	2001-05-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Leuconostoc mesenteroides
Macromolecule	GLUCOSE 6-PHOSPHATE 1-DEHYDROGENASE (protein)
Unique Ligands	NAD

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1H9A \| pdb_00001h9a	Download File View File

COMPLEX OF ACTIVE MUTANT (Q365->C) OF GLUCOSE 6-PHOSPHATE DEHYDROGENASE FROM L. MESENTEROIDES WITH COENZYME NADP

Adams, M.J., Naylor, C.E., Gover, S.

(2001) Acta Crystallogr D Biol Crystallogr 57: 635

Released	2001-05-03
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Leuconostoc mesenteroides
Macromolecule	GLUCOSE 6-PHOSPHATE 1-DEHYDROGENASE (protein)
Unique Ligands	NAP, SO4

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1H9B \| pdb_00001h9b	Download File View File

ACTIVE MUTANT (Q365->C) OF GLUCOSE 6-PHOSPHATE DEHYDROGENASE FROM LEUCONOSTOC MESENTEROIDES

Adams, M.J., Naylor, C.E., Gover, S.

(2001) Acta Crystallogr D Biol Crystallogr 57: 635

Released	2001-05-03
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Leuconostoc mesenteroides
Macromolecule	GLUCOSE 6-PHOSPHATE 1-DEHYDROGENASE (protein)
Unique Ligands	SO4

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1PGP \| pdb_00001pgp	Download File View File

CRYSTALLOGRAPHIC STUDY OF COENZYME, COENZYME ANALOGUE AND SUBSTRATE BINDING IN 6-PHOSPHOGLUCONATE DEHYDROGENASE: IMPLICATIONS FOR NADP SPECIFICITY AND THE ENZYME MECHANISM

Adams, M.J., Phillips, C., Gover, S., Naylor, C.E.

(1994) Structure 2: 651-668

Released	1995-02-27
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Ovis aries
Macromolecule	6-PHOSPHOGLUCONATE DEHYDROGENASE (protein)
Unique Ligands	6PG, SO4

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1QM6 \| pdb_00001qm6	Download File View File

Closed form of Clostridium perfringens alpha-toxin strain NCTC8237

Naylor, C.E., Miller, J., Titball, R.W., Basak, A.K.

(1999) J Mol Biology 294: 757

Released	1999-09-27
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Clostridium perfringens
Macromolecule	PHOSPHOLIPASE C (protein)
Unique Ligands	ZN

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1QMD \| pdb_00001qmd	Download File View File

calcium bound closed form alpha-toxin from Clostridium perfringens

Naylor, C.E., Miller, J., Titball, R.W., Basak, A.K.

(1999) J Mol Biology 294: 757

Released	2000-02-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Clostridium perfringens
Macromolecule	PHOSPHOLIPASE C (protein)
Unique Ligands	CA, ZN

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1V1O \| pdb_00001v1o	Download File View File

staphylococcal superantigen-like protein 7

Naylor, C.E., Briggs, D.C., Nair, S.P., Al-Shangiti, A.M.

(2004) Infect Immun 72: 4261

Released	2004-07-01
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Staphylococcus aureus
Macromolecule	EXOTOXIN 1 (protein)

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1V1P \| pdb_00001v1p	Download File View File

The structure SSL from Staphylococcus Aureus from an orthorhombic crystal form

Briggs, D.C., Naylor, C.E.

(2004) Infect Immun 72: 4261

Released	2004-07-01
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Staphylococcus aureus
Macromolecule	Exotoxin 1 (protein)

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2DPG \| pdb_00002dpg	Download File View File

COMPLEX OF INACTIVE MUTANT (H240->N) OF GLUCOSE 6-PHOSPHATE DEHYDROGENASE FROM LEUCONOSTOC MESENTEROIDES WITH NADP+

Adams, M.J., Naylor, C.E., Paludin, S., Gover, S.

(1998) Biochemistry 37: 2759-2767

Released	1998-07-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Leuconostoc mesenteroides
Macromolecule	GLUCOSE 6-PHOSPHATE DEHYDROGENASE (protein)
Unique Ligands	NAP

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2WJ5 \| pdb_00002wj5	Download File View File

Rat alpha crystallin domain

Naylor, C.E., Bagneris, C., Bateman, O.A., Cronin, N., Keep, N.H., Slingsby, C.

(2009) J Mol Biology 392: 1242

Released	2009-08-11
Method	X-RAY DIFFRACTION 1.12 Å
Organisms	Rattus norvegicus
Macromolecule	HEAT SHOCK PROTEIN BETA-6 (protein)

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2WJ7 \| pdb_00002wj7	Download File View File

human alphaB crystallin

Naylor, C.E., Bagneris, C., Bateman, O.A., Cronin, N., Keep, N.H., Slingsby, C.

(2009) J Mol Biology 392: 1242

Released	2009-08-11
Method	X-RAY DIFFRACTION 2.631 Å
Organisms	Homo sapiens
Macromolecule	ALPHA-CRYSTALLIN B CHAIN (protein)

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2WWN \| pdb_00002wwn	Download File View File

Yersinia pseudotuberculosis Superoxide Dismutase C with bound Azide

Basak, A.K., Duffield, M.L., Naylor, C.E., Huyet, J., Titball, R.W.

To be published

Released	2010-11-03
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Yersinia pseudotuberculosis
Macromolecule	SUPEROXIDE DISMUTASE [CU-ZN] (protein)
Unique Ligands	AZI, MES, ZN

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2WWO \| pdb_00002wwo	Download File View File

Yersinia pseudotuberculosis Superoxide Dismutase C

Basak, A.K., Duffield, M.L., Naylor, C.E., Huyet, J., Titball, R.W.

To be published

Released	2010-11-03
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Yersinia pseudotuberculosis
Macromolecule	SUPEROXIDE DISMUTASE [CU-ZN] (protein)
Unique Ligands	GOL, MES, ZN

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2WXT \| pdb_00002wxt	Download File View File

Clostridium perfringens alpha-toxin strain NCTC8237

Justin, N., Naylor, C.E., Basak, A.K.

(2010) Acta Crystallogr D Biol Crystallogr 66: 1067

Released	2009-11-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Clostridium perfringens
Macromolecule	PHOSPHOLIPASE C (protein)
Unique Ligands	CA, CD, ZN

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2WXU \| pdb_00002wxu	Download File View File

Clostridium perfringens alpha-toxin strain NCTC8237 mutant T74I

Vachieri, S.G., Naylor, C.E., Basak, A.K.

(2010) Acta Crystallogr D Biol Crystallogr 66: 1067

Released	2009-11-17
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Clostridium perfringens
Macromolecule	PHOSPHOLIPASE C (protein)
Unique Ligands	CA, CD, ZN

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2WY6 \| pdb_00002wy6	Download File View File

Clostridium perfringens alpha-toxin strain NCTC8237 mutant T74I

Vachieri, S.G., Naylor, C.E., Basak, A.K.

(2011) Acta Crystallogr D Biol Crystallogr 66: 1067

Released	2009-11-24
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Clostridium perfringens
Macromolecule	PHOSPHOLIPASE C (protein)
Unique Ligands	CA, CD, GOL, ZN

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2XH6 \| pdb_00002xh6	Download File View File

Clostridium perfringens enterotoxin

Briggs, D.C., Naylor, C.E., Smedley III, J.G., MCClane, B.A., Basak, A.K.

(2011) J Mol Biology 413: 138

Released	2011-04-27
Method	X-RAY DIFFRACTION 2.69 Å
Organisms	Clostridium perfringens
Macromolecule	HEAT-LABILE ENTEROTOXIN B CHAIN (protein)
Unique Ligands	BOG, DIO

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2Y1Y \| pdb_00002y1y	Download File View File

Human alphaB crystallin ACD(residues 71-157)

Naylor, C.E., Bagneris, C., Clark, A.R., Keep, N.H., Slingsby, C.

(2011) J Mol Biology 408: 118

Released	2011-03-02
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	ALPHA-CRYSTALLIN B CHAIN, (protein)
Unique Ligands	MRD

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2Y1Z \| pdb_00002y1z	Download File View File

Human alphaB Crystallin ACD R120G

Clark, A.R., Bagneris, C., Naylor, C.E., Keep, N.H., Slingsby, C.

(2011) J Mol Biology 408: 118

Released	2011-03-02
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	ALPHA-CRYSTALLIN B CHAIN (protein)
Unique Ligands	MPD, MRD

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2Y22 \| pdb_00002y22	Download File View File

Human AlphaB-crystallin Domain (residues 67-157)

Naylor, C.E., Bagneris, C., Clark, A.R., Keep, N.H., Slingsby, C.

(2011) J Mol Biology 408: 118

Released	2011-03-02
Method	X-RAY DIFFRACTION 3.7 Å
Organisms	Homo sapiens
Macromolecule	ALPHA-CRYSTALLIN B (protein)

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2YGT \| pdb_00002ygt	Download File View File

Clostridium perfringens delta-toxin

Huyet, J., Naylor, C.E., Gibert, M., Popoff, M.R., Basak, A.K.

(2013) PLoS One 8: 66673

Released	2012-05-16
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Clostridium perfringens
Macromolecule	DELTA TOXIN (protein)
Unique Ligands	GOL, IMD, ZN

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2YHJ \| pdb_00002yhj	Download File View File

Clostridium perfringens Enterotoxin at 4.0 Angstrom Resolution

Briggs, D.C., Naylor, C.E., Smedley III, J.G., McClane, B.A., Basak, A.K.

(2011) J Mol Biology 413: 138

Released	2011-08-17
Method	X-RAY DIFFRACTION 4 Å
Organisms	Clostridium perfringens NCTC 8239
Macromolecule	HEAT-LABILE ENTEROTOXIN B CHAIN (protein)

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3ZIW \| pdb_00003ziw	Download File View File

Clostridium perfringens enterotoxin, D48A mutation and N-terminal 37 residues deleted

Yelland, T., Naylor, C.E., Savva, C.G., Basak, A.K.

(2014) J Mol Biology 426: 3134

Released	2014-01-29
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Clostridium perfringens
Macromolecule	HEAT-LABILE ENTEROTOXIN B CHAIN (protein)
Unique Ligands	P6G

1 to 25 of 52 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1CA1 | pdb_00001ca1

1H93 | pdb_00001h93

1H94 | pdb_00001h94

1H9A | pdb_00001h9a

1H9B | pdb_00001h9b

1PGP | pdb_00001pgp

1QM6 | pdb_00001qm6

1QMD | pdb_00001qmd

1V1O | pdb_00001v1o

1V1P | pdb_00001v1p

2DPG | pdb_00002dpg

2WJ5 | pdb_00002wj5

2WJ7 | pdb_00002wj7

2WWN | pdb_00002wwn

2WWO | pdb_00002wwo

2WXT | pdb_00002wxt

2WXU | pdb_00002wxu

2WY6 | pdb_00002wy6

2XH6 | pdb_00002xh6

2Y1Y | pdb_00002y1y

2Y1Z | pdb_00002y1z

2Y22 | pdb_00002y22

2YGT | pdb_00002ygt

2YHJ | pdb_00002yhj

3ZIW | pdb_00003ziw