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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Nichols, C.E."

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Search Summary

This query matches 153 Structures.

Refinements

Structure Determination Methodology

experimental (153)

Scientific Name of Source Organism

	Mus musculus (75)
	Homo sapiens (30)
	Human immunodeficiency virus 1 (13)
	Aspergillus nidulans (12)
	Staphylococcus aureus (8)
	HIV-1 M:B_HXB2R (4)
	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (3)
	Escherichia coli (2)
	Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 (2)
	Staphylococcus aureus subsp. aureus MRSA252 (2)

More...

Taxonomy

	Eukaryota (115)
	Bacteria (21)
	Riboviria (18)
	other sequences (1)

Experimental Method

X-RAY DIFFRACTION (153)

Polymer Entity Type

	Protein (153)
	DNA (1)
	RNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (37)
	1.5 - 2.0 (72)
	2.0 - 2.5 (18)
	2.5 - 3.0 (22)
	3.0 - 3.5 (4)

Release Date

	2000 - 2004 (27)
	2005 - 2009 (22)
	2010 - 2014 (2)
	2015 - 2019 (12)
	2020 - 2024 (90)

Enzyme Classification Name

	Transferases (109)
	Lyases (16)
	Oxidoreductases (12)
	Hydrolases (2)

Symmetry Type

	Asymmetric (133)
	Cyclic (22)

SCOP Classification

	Alpha and beta proteins (a+b) (77)
	Multi-domain proteins (alpha and beta) (27)
	Alpha and beta proteins (a/b) (33)
	All beta proteins (25)
	Artifacts (1)

AllSelected

1 to 25 of 153 Structures

Page 1 of 7

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1K6I \| pdb_00001k6i	Download File View File

Crystal structure of Nmra, a negative transcriptional regulator (Trigonal form)

Stammers, D.K., Ren, J., Leslie, K., Nichols, C.E., Lamb, H.K., Cocklin, S., Dodds, A., Hawkins, A.R.

(2001) EMBO J 20: 6619-6626

Released	2001-12-05
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Aspergillus nidulans
Macromolecule	NmrA (protein)
Unique Ligands	CL

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1K6J \| pdb_00001k6j	Download File View File

Crystal structure of Nmra, a negative transcriptional regulator (Monoclinic form)

Stammers, D.K., Ren, J., Leslie, K., Nichols, C.E., Lamb, H.K., Cocklin, S., Dodds, A., Hawkins, A.R.

(2001) EMBO J 20: 6619-6626

Released	2002-02-20
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Aspergillus nidulans
Macromolecule	NmrA (protein)
Unique Ligands	CL

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1K6X \| pdb_00001k6x	Download File View File

Crystal structure of Nmra, a negative transcriptional regulator in complex with NAD at 1.5 A resolution (Trigonal form)

Stammers, D.K., Ren, J., Leslie, K., Nichols, C.E., Lamb, H.K., Cocklin, S., Dodds, A., Hawkins, A.R.

(2002) EMBO J 20: 6619-6626

Released	2002-02-20
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Aspergillus nidulans
Macromolecule	NmrA (protein)
Unique Ligands	CL, NAD

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1LW0 \| pdb_00001lw0	Download File View File

CRYSTAL STRUCTURE OF T215Y MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE

Ren, J., Chamberlain, P.P., Nichols, C.E., Douglas, L., Stuart, D.I., Stammers, D.K.

(2002) J Virol 76: 10015-10019

Released	2002-10-30
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	HIV-1 REVERSE TRANSCRIPTASE (protein)
Unique Ligands	NVP, PO4

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1LW2 \| pdb_00001lw2	Download File View File

CRYSTAL STRUCTURE OF T215Y MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH 1051U91

Ren, J., Chamberlain, P.P., Nichols, C.E., Douglas, L., Stuart, D.I., Stammers, D.K.

(2002) J Virol 76: 10015-10019

Released	2002-10-30
Method	X-RAY DIFFRACTION 3 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	HIV-1 REVERSE TRANSCRIPTASE (protein)
Unique Ligands	PO4, U05

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1LWC \| pdb_00001lwc	Download File View File

CRYSTAL STRUCTURE OF M184V MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE

Ren, J., Chamberlain, P.P., Nichols, C.E., Douglas, L., Stuart, D.I., Stammers, D.K.

(2002) J Virol 76: 10015-10019

Released	2002-10-30
Method	X-RAY DIFFRACTION 2.62 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	HIV-1 REVERSE TRANSCRIPTASE (protein)
Unique Ligands	NVP, PO4

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1LWE \| pdb_00001lwe	Download File View File

CRYSTAL STRUCTURE OF M41L/T215Y MUTANT HIV-1 REVERSE TRANSCRIPTASE (RTMN) IN COMPLEX WITH NEVIRAPINE

Ren, J., Chamberlain, P.P., Nichols, C.E., Douglas, L., Stuart, D.I., Stammers, D.K.

(2002) J Virol 76: 10015-10019

Released	2002-10-30
Method	X-RAY DIFFRACTION 2.81 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	HIV-1 REVERSE TRANSCRIPTASE (protein)
Unique Ligands	NVP, PO4

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1LWF \| pdb_00001lwf	Download File View File

CRYSTAL STRUCTURE OF A MUTANT HIV-1 REVERSE TRANSCRIPTASE (RTMQ+M184V: M41L/D67N/K70R/M184V/T215Y) IN COMPLEX WITH NEVIRAPINE

Ren, J., Chamberlain, P.P., Nichols, C.E., Douglas, L., Stuart, D.I., Stammers, D.K.

(2002) J Virol 76: 10015-10019

Released	2002-10-30
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	HIV-1 REVERSE TRANSCRIPTASE (protein)
Unique Ligands	NVP

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1NR5 \| pdb_00001nr5	Download File View File

Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+, NAD and carbaphosphonate

Nichols, C.E., Ren, J., Lamb, H.K., Hawkins, A.R., Stammers, D.K.

(2003) J Mol Biology 327: 129-144

Released	2003-03-18
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Aspergillus nidulans
Macromolecule	3-DEHYDROQUINATE SYNTHASE (protein)
Unique Ligands	CL, CO, CRB, NAD, ZN

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1NRX \| pdb_00001nrx	Download File View File

Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+ and NAD

Nichols, C.E., Ren, J., Lamb, H.K., Hawkins, A.R., Stammers, D.K.

(2003) J Mol Biology 327: 129-144

Released	2003-03-18
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Aspergillus nidulans
Macromolecule	3-dehydroquinate synthase (protein)
Unique Ligands	CL, NAD, ZN

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1NUA \| pdb_00001nua	Download File View File

Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+

Nichols, C.E., Ren, J., Lamb, H.K., Hawkins, A.R., Stammers, D.K.

(2003) J Mol Biology 327: 129-144

Released	2003-03-18
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Aspergillus nidulans
Macromolecule	3-DEHYDROQUINATE SYNTHASE (protein)
Unique Ligands	CL, ZN

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1NVA \| pdb_00001nva	Download File View File

Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+ and ADP

Nichols, C.E., Ren, J., Lamb, H.K., Hawkins, A.R., Stammers, D.K.

(2003) J Mol Biology 327: 129-144

Released	2003-03-18
Method	X-RAY DIFFRACTION 2.62 Å
Organisms	Aspergillus nidulans
Macromolecule	3-DEHYDROQUINATE SYNTHASE (protein)
Unique Ligands	ADP, CL, ZN

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1NVB \| pdb_00001nvb	Download File View File

Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+ and carbaphosphonate

Nichols, C.E., Ren, J., Lamb, H.K., Hawkins, A.R., Stammers, D.K.

(2003) J Mol Biology 327: 129-144

Released	2003-03-18
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Aspergillus nidulans
Macromolecule	3-DEHYDROQUINATE SYNTHASE (protein)
Unique Ligands	CL, CRB, NAD, ZN

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1NVD \| pdb_00001nvd	Download File View File

Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+ and carbaphosphonate

Nichols, C.E., Ren, J., Lamb, H.K., Hawkins, A.R., Stammers, D.K.

(2003) J Mol Biology 327: 129-144

Released	2003-03-18
Method	X-RAY DIFFRACTION 2.51 Å
Organisms	Aspergillus nidulans
Macromolecule	3-DEHYDROQUINATE SYNTHASE (protein)
Unique Ligands	CL, CRB, ZN

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1NVE \| pdb_00001nve	Download File View File

Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+ and NAD

Nichols, C.E., Ren, J., Lamb, H.K., Hawkins, A.R., Stammers, D.K.

(2003) J Mol Biology 327: 129-144

Released	2003-03-18
Method	X-RAY DIFFRACTION 2.58 Å
Organisms	Aspergillus nidulans
Macromolecule	3-DEHYDROQUINATE SYNTHASE (protein)
Unique Ligands	CL, NAD, ZN

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1NVF \| pdb_00001nvf	Download File View File

Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+, ADP and carbaphosphonate

Nichols, C.E., Ren, J., Lamb, H.K., Hawkins, A.R., Stammers, D.K.

(2003) J Mol Biology 327: 129-144

Released	2003-03-18
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Aspergillus nidulans
Macromolecule	3-DEHYDROQUINATE SYNTHASE (protein)
Unique Ligands	ADP, CL, CRB, ZN

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1S1T \| pdb_00001s1t	Download File View File

Crystal structure of L100I mutant HIV-1 reverse transcriptase in complex with UC-781

Ren, J., Nichols, C.E., Chamberlain, P.P., Stammers, D.K.

(2004) J Mol Biology 336: 569-578

Released	2004-06-29
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	Reverse transcriptase (protein)
Unique Ligands	PO4, UC1

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1S1U \| pdb_00001s1u	Download File View File

Crystal structure of L100I mutant HIV-1 reverse transcriptase in complex with nevirapine

Ren, J., Nichols, C.E., Chamberlain, P.P., Stammers, D.K.

(2004) J Mol Biology 336: 569-578

Released	2004-06-29
Method	X-RAY DIFFRACTION 3 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	Reverse transcriptase (protein)
Unique Ligands	NVP

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1S1V \| pdb_00001s1v	Download File View File

Crystal structure of L100I mutant HIV-1 reverse transcriptase in complex with TNK-651

Ren, J., Nichols, C.E., Chamberlain, P.P., Stammers, D.K.

(2004) J Mol Biology 336: 569-578

Released	2004-06-29
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	Reverse transcriptase (protein)
Unique Ligands	TNK

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1S1W \| pdb_00001s1w	Download File View File

Crystal structure of V106A mutant HIV-1 reverse transcriptase in complex with UC-781

Ren, J., Nichols, C.E., Chamberlain, P.P., Stammers, D.K.

(2004) J Mol Biology 336: 569-578

Released	2004-06-29
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	Reverse transcriptase (protein)
Unique Ligands	UC1

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1S1X \| pdb_00001s1x	Download File View File

Crystal structure of V108I mutant HIV-1 reverse transcriptase in complex with nevirapine

Ren, J., Nichols, C.E., Chamberlain, P.P., Stammers, D.K.

(2004) J Mol Biology 336: 569-578

Released	2004-06-29
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	Reverse transcriptase (protein)
Unique Ligands	NVP

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1SFJ \| pdb_00001sfj	Download File View File

2.4A Crystal structure of Staphylococcus aureus type I 3-dehydroquinase, with 3-dehydroquinate bound

Nichols, C.E., Lockyer, M., Hawkins, A.R., Stammers, D.K.

(2004) Proteins 56: 625-628

Released	2004-10-12
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Staphylococcus aureus subsp. aureus MRSA252
Macromolecule	3-dehydroquinate dehydratase (protein)
Unique Ligands	DHK

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1SFL \| pdb_00001sfl	Download File View File

1.9A Crystal structure of Staphylococcus aureus type I 3-dehydroquinase, apo form

Nichols, C.E., Lockyer, M., Hawkins, A.R., Stammers, D.K.

(2004) Proteins 56: 625-628

Released	2004-10-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Staphylococcus aureus subsp. aureus MRSA252
Macromolecule	3-dehydroquinate dehydratase (protein)

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1SG6 \| pdb_00001sg6	Download File View File

Crystal structure of Aspergillus nidulans 3-dehydroquinate synthase (AnDHQS) in complex with Zn2+ and NAD+, at 1.7D

Nichols, C.E., Hawkins, A.R., Stammers, D.K.

(2004) Acta Crystallogr D Biol Crystallogr 60: 971-973

Released	2004-08-31
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Aspergillus nidulans
Macromolecule	Pentafunctional AROM polypeptide (protein)
Unique Ligands	NAD, ZN