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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Nunn, C.M."

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Search Summary

This query matches 20 Structures.

Refinements

Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

	Mycobacterium tuberculosis H37Rv (2)
	Mycobacterium tuberculosis (1)
	Tobacco etch virus (1)

Taxonomy

	Bacteria (3)
	Riboviria (1)

Experimental Method

X-RAY DIFFRACTION (20)

Polymer Entity Type

	DNA (16)
	Protein (4)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (3)
	2.0 - 2.5 (14)
	2.5 - 3.0 (2)

Release Date

	1990 - 1994 (2)
	1995 - 1999 (12)
	2000 - 2004 (4)
	2010 - 2014 (2)

Enzyme Classification Name

	Oxidoreductases (2)
	Hydrolases (1)

Symmetry Type

	Cyclic (4)
	Asymmetric (1)

SCOP Classification

	All alpha proteins (3)
	All beta proteins (1)

AllSelected

1 to 20 of 20 Structures

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102D \| pdb_0000102d	Download File View File

SEQUENCE-DEPENDENT DRUG BINDING TO THE MINOR GROOVE OF DNA: THE CRYSTAL STRUCTURE OF THE DNA DODECAMER D(CGCAAATTTGCG)2 COMPLEXED WITH PROPAMIDINE

Nunn, C.M., Neidle, S.

(1995) J Med Chem 38: 2317-2325

Released	1995-02-07
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-D(CPGPCPAPAPAPTPTPTPGPCPG)-3') (nucleic acid)
Unique Ligands	TNT

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109D \| pdb_0000109d	Download File View File

VARIABILITY IN DNA MINOR GROOVE WIDTH RECOGNISED BY LIGAND BINDING: THE CRYSTAL STRUCTURE OF A BIS-BENZIMIDAZOLE COMPOUND BOUND TO THE DNA DUPLEX D(CGCGAATTCGCG)2

Czarny, A., Boykin, D.W., Wood, A.A., Nunn, C.M., Neidle, S., Zhao, M., Wilson, W.D.

(1995) Nucleic Acids Res 23: 3678-3684

Released	1995-05-08
Method	X-RAY DIFFRACTION 2 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	IBB, MG

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166D \| pdb_0000166d	Download File View File

DRUG-DNA MINOR GROOVE RECOGNITION: CRYSTAL STRUCTURE OF GAMMA-OXAPENTAMIDINE COMPLEXED WITH D(CGCGAATTCGCG)2

Nunn, C.M., Jenkins, T.C., Neidle, S.

(1994) Eur J Biochem 226: 953-961

Released	1994-10-15
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	PET

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1GU9 \| pdb_00001gu9	Download File View File

Crystal Structure of Mycobacterium tuberculosis Alkylperoxidase AhpD

Nunn, C.M., Djordjevic, S., Hillas, P.J., Nishida, C., Ortiz de Montellano, P.R.

(2002) J Biological Chem 277: 20033

Released	2002-02-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	ALKYLHYDROPEROXIDASE D (protein)

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1LW1 \| pdb_00001lw1	Download File View File

Crystal Structure Of Mycobacterium Tuberculosis Alkylperoxidase Ahpd H137F mutant

Nunn, C.M., Djordjevic, S., Ortiz de Montellano, P.R.

(2003) J Biological Chem 278: 29502-29508

Released	2002-07-17
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	ALKYLHYDROPEROXIDASE D (protein)

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1ME5 \| pdb_00001me5	Download File View File

Crystal Structure of Mycobacterium Tuberculosis Alkylperoxidase AhpD H132Q Mutant

Nunn, C.M., Djordjevic, S., Ortiz de Montellano, P.R.

(2003) J Biological Chem 278: 29502-29508

Released	2002-09-11
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	ALKYLHYDROPEROXIDASE D (protein)

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1PRP \| pdb_00001prp	Download File View File

CRYSTAL STRUCTURE OF D(CGCGAATTCGCG) COMPLEXED WITH PROPAMIDINE, A SHORT-CHAIN HOMOLOGUE OF THE DRUG PENTAMIDIN

Nunn, C.M., Jenkins, T.C., Neidle, S.

(1993) Biochemistry 32: 13838-13843

Released	1994-01-15
Method	X-RAY DIFFRACTION 2.1 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	TNT

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1Q31 \| pdb_00001q31	Download File View File

Crystal Structure of the Tobacco Etch Virus Protease C151A mutant

Nunn, C.M., Djordjevic, S., George, R.R., Urquhart, G.T., Chao, L.H., Tsuchiya, Y.

(2005) J Mol Biology 350: 145-155

Released	2004-11-02
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Tobacco etch virus
Macromolecule	Nuclear inclusion protein A (protein)
Unique Ligands	BME

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1VTH \| pdb_00001vth	Download File View File

DNA-DRUG INTERACTIONS: THE CRYSTAL STRUCTURES OF D(TGTACA) COMPLEXED WITH DAUNOMYCIN

Nunn, C.M., Van Meervelt, L., Zhang, S., Moore, M.H., Kennard, O.

(1991) J Mol Biology 222: 167-177

Released	2011-07-13
Method	X-RAY DIFFRACTION 1.6 Å
Macromolecule	DNA (5'-D(TPGPTPAPCPA)-3') (nucleic acid)
Unique Ligands	DM1

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1VTI \| pdb_00001vti	Download File View File

DNA-DRUG INTERACTIONS: THE CRYSTAL STRUCTURES OF D(TGATCA) COMPLEXED WITH DAUNOMYCIN

Nunn, C.M., Van Meervelt, L., Zhang, S., Moore, M.H., Kennard, O.

(1991) J Mol Biology 222: 167-177

Released	2011-07-13
Method	X-RAY DIFFRACTION 1.7 Å
Macromolecule	DNA (5'-D(TPGPTPAPCPA)-3') (nucleic acid)
Unique Ligands	DM1

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227D \| pdb_0000227d	Download File View File

A CRYSTALLOGRAPHIC AND SPECTROSCOPIC STUDY OF THE COMPLEX BETWEEN D(CGCGAATTCGCG)2 AND 2,5-BIS(4-GUANYLPHENYL)FURAN, AN ANALOGUE OF BERENIL. STRUCTURAL ORIGINS OF ENHANCED DNA-BINDING AFFINITY

Laughton, C.A., Tanious, F., Nunn, C.M., Boykin, D.W., Wilson, W.D., Neidle, S.

(1996) Biochemistry 35: 5655-5661

Released	1995-11-11
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	BGF

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232D \| pdb_0000232d	Download File View File

THE HIGH RESOLUTION CRYSTAL STRUCTURE OF THE DNA DECAMER D(AGGCATGCCT)

Nunn, C.M., Neidle, S.

(1996) J Mol Biology 256: 340-351

Released	1996-03-22
Method	X-RAY DIFFRACTION 1.3 Å
Macromolecule	DNA (5'-D(APGPGPCPAPTPGPCPCPT)-3') (nucleic acid)
Unique Ligands	NCO

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237D \| pdb_0000237d	Download File View File

CRYSTAL STRUCTURE OF A DNA DECAMER SHOWING A NOVEL PSEUDO FOUR-WAY HELIX-HELIX JUNCTION

Spink, N., Nunn, C.M., Vojtechovsky, J., Berman, H.M., Neidle, S.

(1995) Proc Natl Acad Sci U S A 92: 10767-10771

Released	1996-03-22
Method	X-RAY DIFFRACTION 2.5 Å
Macromolecule	DNA (5'-D(CPGPCPAPAPTPTPGPCPG)-3') (nucleic acid)

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238D \| pdb_0000238d	Download File View File

CRYSTAL STRUCTURE OF THE DNA DECAMER D(AGG(BR)CATGCCT): COMPARISON WITH D(AGGCATGCCT) AND IMPLICATIONS FOR COBALT HEXAMMINE BINDING TO DNA

Nunn, C.M.

(1996) J Biomol Struct Dyn 14: 49-56

Released	1996-01-30
Method	X-RAY DIFFRACTION 2 Å
Macromolecule	DNA (5'-D(APGPGP(CBR)PAPTPGPCPCPT)-3') (nucleic acid)

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252D \| pdb_0000252d	Download File View File

CRYSTAL STRUCTURE OF THE B-DNA DECAMER D(CGCAATTGCG)2; SEQUENCE-DEPENDENT CROSSED HELIX PACKING

Wood, A.A., Nunn, C.M., Trent, J.O., Neidle, S.

(1997) J Mol Biology 269: 827-841

Released	1996-04-09
Method	X-RAY DIFFRACTION 2.3 Å
Macromolecule	DNA (5'-D(CPGPCPAPAPTPTPGPCPG)-3') (nucleic acid)

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261D \| pdb_0000261d	Download File View File

CRYSTAL STRUCTURE OF THE DNA DECAMER D(CGCAATTGCG) COMPLEXED WITH THE MINOR GROOVE BINDING DRUG NETROPSIN

Nunn, C.M., Garman, E., Neidle, S.

(1997) Biochemistry 36: 4792-4799

Released	1997-04-22
Method	X-RAY DIFFRACTION 2.4 Å
Macromolecule	DNA (5'-D(CPGPCPAPAPTPTPGPCPG)-3') (nucleic acid)
Unique Ligands	NT

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281D \| pdb_0000281d	Download File View File

CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GGCATGCC)

Nunn, C.M., Neidle, S.

(1997) Acta Crystallogr D Biol Crystallogr 53: 269-273

Released	1996-09-16
Method	X-RAY DIFFRACTION 2.38 Å
Macromolecule	DNA (5'-D(GPGPCPAPTPGPCPC)-3') (nucleic acid)

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335D \| pdb_0000335d	Download File View File

THE CRYSTAL STRUCTURE OF THE DNA DECAMER D(GGCAATTGCG) CONTAINS BOTH MAJOR AND MINOR GROOVE BINDING G.(G.C) TRIPLETS

Nunn, C.M., Neidle, S.

(1998) Acta Crystallogr D Biol Crystallogr 54: 577-583

Released	1998-08-10
Method	X-RAY DIFFRACTION 2.4 Å
Macromolecule	DNA (5'-D(GPGPCPAPAPTPTPGPCPG)-3') (nucleic acid)
Unique Ligands	MG

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458D \| pdb_0000458d	Download File View File

DNA MINOR-GROOVE RECOGNITION OF A TRIS-BENZIMIDAZOLE DRUG BY A NON-SELF-COMPLEMENTARY AT-RICH SEQUENCE

Aymami, J., Nunn, C.M., Neidle, S.

(1999) Nucleic Acids Res 27: 2691-2698

Released	1999-06-28
Method	X-RAY DIFFRACTION 2.3 Å
Macromolecule	DNA (5'-D(CPGP(CBR)PAPTPAPTPTPTPGPCPG)-3') (nucleic acid) DNA (5'-D(CPGPCPAPAPAPTPAPTPGPCPG)-3') (nucleic acid)

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459D \| pdb_0000459d	Download File View File

DNA MINOR-GROOVE RECOGNITION OF A TRIS-BENZIMIDAZOLE DRUG

Aymami, J., Nunn, C.M., Neidle, S.

(1999) Nucleic Acids Res 27: 2691-2698

Released	1999-06-28
Method	X-RAY DIFFRACTION 2.3 Å
Macromolecule	DNA (5'-D(CPGP(CBR)PAPTPAPTPTPTPGPCPG)-3') (nucleic acid) DNA (5'-D(CPGPCPAPAPAPTPAPTPGPCPG)-3') (nucleic acid)
Unique Ligands	TBZ

1 to 20 of 20 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

102D | pdb_0000102d

SEQUENCE-DEPENDENT DRUG BINDING TO THE MINOR GROOVE OF DNA: THE CRYSTAL STRUCTURE OF THE DNA DODECAMER D(CGCAAATTTGCG)2 COMPLEXED WITH PROPAMIDINE

109D | pdb_0000109d

VARIABILITY IN DNA MINOR GROOVE WIDTH RECOGNISED BY LIGAND BINDING: THE CRYSTAL STRUCTURE OF A BIS-BENZIMIDAZOLE COMPOUND BOUND TO THE DNA DUPLEX D(CGCGAATTCGCG)2

166D | pdb_0000166d

DRUG-DNA MINOR GROOVE RECOGNITION: CRYSTAL STRUCTURE OF GAMMA-OXAPENTAMIDINE COMPLEXED WITH D(CGCGAATTCGCG)2

1GU9 | pdb_00001gu9

Crystal Structure of Mycobacterium tuberculosis Alkylperoxidase AhpD

1LW1 | pdb_00001lw1

Crystal Structure Of Mycobacterium Tuberculosis Alkylperoxidase Ahpd H137F mutant

1ME5 | pdb_00001me5

Crystal Structure of Mycobacterium Tuberculosis Alkylperoxidase AhpD H132Q Mutant

1PRP | pdb_00001prp

CRYSTAL STRUCTURE OF D(CGCGAATTCGCG) COMPLEXED WITH PROPAMIDINE, A SHORT-CHAIN HOMOLOGUE OF THE DRUG PENTAMIDIN

1Q31 | pdb_00001q31

Crystal Structure of the Tobacco Etch Virus Protease C151A mutant

1VTH | pdb_00001vth

DNA-DRUG INTERACTIONS: THE CRYSTAL STRUCTURES OF D(TGTACA) COMPLEXED WITH DAUNOMYCIN

1VTI | pdb_00001vti

DNA-DRUG INTERACTIONS: THE CRYSTAL STRUCTURES OF D(TGATCA) COMPLEXED WITH DAUNOMYCIN

227D | pdb_0000227d

A CRYSTALLOGRAPHIC AND SPECTROSCOPIC STUDY OF THE COMPLEX BETWEEN D(CGCGAATTCGCG)2 AND 2,5-BIS(4-GUANYLPHENYL)FURAN, AN ANALOGUE OF BERENIL. STRUCTURAL ORIGINS OF ENHANCED DNA-BINDING AFFINITY

232D | pdb_0000232d

THE HIGH RESOLUTION CRYSTAL STRUCTURE OF THE DNA DECAMER D(AGGCATGCCT)

237D | pdb_0000237d

CRYSTAL STRUCTURE OF A DNA DECAMER SHOWING A NOVEL PSEUDO FOUR-WAY HELIX-HELIX JUNCTION

238D | pdb_0000238d

CRYSTAL STRUCTURE OF THE DNA DECAMER D(AGG(BR)CATGCCT): COMPARISON WITH D(AGGCATGCCT) AND IMPLICATIONS FOR COBALT HEXAMMINE BINDING TO DNA

252D | pdb_0000252d

CRYSTAL STRUCTURE OF THE B-DNA DECAMER D(CGCAATTGCG)2; SEQUENCE-DEPENDENT CROSSED HELIX PACKING

261D | pdb_0000261d

CRYSTAL STRUCTURE OF THE DNA DECAMER D(CGCAATTGCG) COMPLEXED WITH THE MINOR GROOVE BINDING DRUG NETROPSIN

281D | pdb_0000281d

CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GGCATGCC)

335D | pdb_0000335d

THE CRYSTAL STRUCTURE OF THE DNA DECAMER D(GGCAATTGCG) CONTAINS BOTH MAJOR AND MINOR GROOVE BINDING G.(G.C) TRIPLETS

458D | pdb_0000458d

DNA MINOR-GROOVE RECOGNITION OF A TRIS-BENZIMIDAZOLE DRUG BY A NON-SELF-COMPLEMENTARY AT-RICH SEQUENCE

459D | pdb_0000459d

DNA MINOR-GROOVE RECOGNITION OF A TRIS-BENZIMIDAZOLE DRUG

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

102D | pdb_0000102d

109D | pdb_0000109d

166D | pdb_0000166d

1GU9 | pdb_00001gu9

1LW1 | pdb_00001lw1

1ME5 | pdb_00001me5

1PRP | pdb_00001prp

1Q31 | pdb_00001q31

1VTH | pdb_00001vth

1VTI | pdb_00001vti

227D | pdb_0000227d

232D | pdb_0000232d

237D | pdb_0000237d

238D | pdb_0000238d

252D | pdb_0000252d

261D | pdb_0000261d

281D | pdb_0000281d

335D | pdb_0000335d

458D | pdb_0000458d

459D | pdb_0000459d