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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Petit, P."

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Search Summary

This query matches 34 Structures.

Refinements

Structure Determination Methodology

experimental (34)

Scientific Name of Source Organism

	Homo sapiens (11)
	Vitis vinifera (5)
	Arabidopsis thaliana (2)
	Saccharomyces cerevisiae (2)
	Chlamydia pneumoniae (1)
	Chlamydia trachomatis (1)
	Legionella pneumophila str. Paris (1)
	Methanocaldococcus jannaschii DSM 2661 (1)
	Nostoc sp. PCC 7120 = FACHB-418 (1)
	Oleispira antarctica (1)

More...

Taxonomy

	Eukaryota (20)
	Bacteria (9)
	Archaea (3)
	unclassified sequences (2)

Experimental Method

X-RAY DIFFRACTION (34)

Polymer Entity Type

Protein (34)

Refinement Resolution (Å)

	1.5 - 2.0 (12)
	2.0 - 2.5 (16)
	2.5 - 3.0 (5)
	3.0 - 3.5 (1)

Release Date

	2005 - 2009 (8)
	2010 - 2014 (21)
	2015 - 2019 (5)

Enzyme Classification Name

	Transferases (9)
	Hydrolases (11)
	Oxidoreductases (5)
	Lyases (1)

Symmetry Type

	Asymmetric (25)
	Cyclic (12)

SCOP Classification

	Alpha and beta proteins (a/b) (18)
	Artifacts (9)
	Multi-domain proteins (alpha and beta) (2)
	Alpha and beta proteins (a+b) (1)
	All beta proteins (1)

AllSelected

1 to 25 of 34 Structures

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2C29 \| pdb_00002c29	Download File View File

Structure of dihydroflavonol reductase from Vitis vinifera at 1.8 A.

Petit, P., Granier, T., D'Estaintot, B.L., Hamdi, S., Gallois, B.

(2007) J Mol Biology 368: 1345

Released	2006-10-16
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Vitis vinifera
Macromolecule	DIHYDROFLAVONOL 4-REDUCTASE (protein)
Unique Ligands	DQH, NAP

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2IOD \| pdb_00002iod	Download File View File

Binding of two substrate analogue molecules to dihydroflavonol-4-reductase alters the functional geometry of the catalytic site

Petit, P., Langlois d'Estaintot, B., Granier, T., Gallois, B.

To be published

Released	2007-09-11
Method	X-RAY DIFFRACTION 2.06 Å
Organisms	Vitis vinifera
Macromolecule	Dihydroflavonol 4-reductase (protein)
Unique Ligands	MYC, NAP

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2NNL \| pdb_00002nnl	Download File View File

Binding of two substrate analogue molecules to dihydroflavonol-4-reductase alters the functional geometry of the catalytic site

Petit, P., Langlois D'Estaintot, B., Granier, T., Gallois, B.

To be published

Released	2007-11-13
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Vitis vinifera
Macromolecule	Dihydroflavonol 4-reductase (protein)
Unique Ligands	ERD, NAP

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3BXX \| pdb_00003bxx	Download File View File

Binding of two substrate analogue molecules to dihydroflavonol 4-reductase alters the functional geometry of the catalytic site

Trabelsi, N., Petit, P., Granier, T., Langlois d'Estaintot, B., Delrot, S., Gallois, B.

(2008) Acta Crystallogr D Biol Crystallogr D64: 883-891

Released	2008-10-21
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Vitis vinifera
Macromolecule	dihydroflavonol 4-reductase (protein)
Unique Ligands	NAP, QUE

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3C1T \| pdb_00003c1t	Download File View File

Binding of two substrate analogue molecules to dihydroflavonol 4-reductase alters the functional geometry of the catalytic site

Trabelsi, N., Petit, P., Granier, T., Langlois d'Estaintot, B., Delrot, S., Gallois, B.

(2008) Acta Crystallogr D Biol Crystallogr D64: 883-891

Released	2008-02-19
Method	X-RAY DIFFRACTION 2.252 Å
Organisms	Vitis vinifera
Macromolecule	dihydroflavonol 4-reductase (protein)
Unique Ligands	MYC, NAP

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3DEL \| pdb_00003del	Download File View File

The structure of CT381, the arginine binding protein from the periplasm Chlamydia trachomatis

Petit, P., Vuillard, L., Spinelli, S.

(2010) J Biological Chem

Released	2009-06-16
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Chlamydia trachomatis
Macromolecule	Arginine Binding Protein (protein)

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3F9M \| pdb_00003f9m	Download File View File

Human pancreatic glucokinase in complex with glucose and activator showing a mobile flap

Petit, P., Gluais, L., Lagarde, A., Vuillard, L., Boutin, J.A., Ferry, G.

(2011) Acta Crystallogr D Biol Crystallogr 67: 929-935

Released	2008-12-02
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Glucokinase (protein)
Unique Ligands	GLC, MRK

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3FGU \| pdb_00003fgu	Download File View File

Catalytic complex of Human Glucokinase

Petit, P., Lagarde, A., Boutin, J.A., Ferry, G., Vuillard, L.

(2011) Acta Crystallogr D Biol Crystallogr 67: 929-935

Released	2009-12-15
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens
Macromolecule	Glucokinase (protein)
Unique Ligands	ANP, BGC, K, MG

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3ID8 \| pdb_00003id8	Download File View File

Ternary complex of human pancreatic glucokinase crystallized with activator, glucose and AMP-PNP

Petit, P., Gluais, L., Lagarde, A., Boutin, J.A., Ferry, G., Vuillard, L.

(2011) Acta Crystallogr D Biol Crystallogr 67: 929-935

Released	2010-07-28
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Glucokinase (protein)
Unique Ligands	ANP, GLC, K, MG, MRK

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3IDH \| pdb_00003idh	Download File View File

Human pancreatic glucokinase in complex with glucose

Petit, P., Gluais, L., Lagarde, A., Boutin, J.A., Ferry, G., Vuillard, L.

(2011) Acta Crystallogr D Biol Crystallogr 67: 929-935

Released	2010-07-28
Method	X-RAY DIFFRACTION 2.14 Å
Organisms	Homo sapiens
Macromolecule	Glucokinase (protein)
Unique Ligands	GLC, K

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3N26 \| pdb_00003n26	Download File View File

Cpn0482 : the arginine binding protein from the periplasm of chlamydia Pneumoniae

Petit, P., Garcia, C., Vuillard, L., Soriani, M., Grandi, G., Marseilles Structural Genomics Program AFMB (MSGP), Marseilles Structural Genomics Program @ AFMB (MSGP)

(2010) J Biological Chem

Released	2010-06-16
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Chlamydia pneumoniae
Macromolecule	Amino acid ABC transporter, periplasmic amino acid-binding protein (protein)
Unique Ligands	ARG

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3NWJ \| pdb_00003nwj	Download File View File

Crystal structure of shikimate kinase from Arabidopsis thaliana (AtSK2)

Fucile, G., Garcia, C., Petit, P., Christendat, D.

(2011) Protein Sci 20: 1125-1136

Released	2011-06-29
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Arabidopsis thaliana
Macromolecule	AtSK2 (protein)

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3P48 \| pdb_00003p48	Download File View File

Structure of the yeast dUTPase DUT1 in complex with dUMPNPP

Petit, P., Singer, A.U., Evdokimova, E., Kudritska, M., Edwards, A.M., Yakunin, A.F., Savchenko, A., Ontario Centre for Structural Proteomics (OCSP)

(2011) Biochem J 437: 243-253

Released	2010-10-27
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Deoxyuridine 5'-triphosphate nucleotidohydrolase (protein)
Unique Ligands	DUP, MG

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3PT1 \| pdb_00003pt1	Download File View File

Structure of DUF89 from Saccharomyces cerevisiae co-crystallized with F6P.

Petit, P., Xu, X., Cui, H., Savchenko, A., Yakunin, A.F.

To be published

Released	2010-12-15
Method	X-RAY DIFFRACTION 1.773 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	UPF0364 protein YMR027W (protein)
Unique Ligands	F6P, GOL, MG

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3QYF \| pdb_00003qyf	Download File View File

Crystal structure of the CRISPR-associated protein SSO1393 from Sulfolobus solfataricus

Petit, P., Xu, X., Chang, C., Savchenko, A., Yakunin, A.F.

To be published

Released	2011-03-23
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Saccharolobus solfataricus
Macromolecule	CRISPR-ASSOCIATED PROTEIN (protein)
Unique Ligands	MG

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3QYJ \| pdb_00003qyj	Download File View File

Crystal structure of ALR0039, a putative alpha/beta hydrolase from Nostoc sp PCC 7120.

Petit, P., Kagan, O., Yakunin, A.F., Savchenko, A.

To be published

Released	2011-03-16
Method	X-RAY DIFFRACTION 1.778 Å
Organisms	Nostoc sp. PCC 7120 = FACHB-418
Macromolecule	Alr0039 protein (protein)

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3R0P \| pdb_00003r0p	Download File View File

Crystal structure of L-PSP putative endoribonuclease from uncultured organism

Cuff, M.E., Petit, P., Xu, X., Cui, H., Savchenko, A., Yakunin, A.F.

To be published

Released	2011-03-23
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	uncultured organism
Macromolecule	L-PSP putative endoribonuclease (protein)

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3R1W \| pdb_00003r1w	Download File View File

Crystal structure of a carbonic anhydrase from a crude oil degrading psychrophilic library

Petit, P., Xu, X., Cui, H., Brown, G., Dong, A., Savchenko, A., Yakunin, A.F.

To be published

Released	2011-03-23
Method	X-RAY DIFFRACTION 1.73 Å
Organisms	unidentified
Macromolecule	carbonic anhydrase (protein)

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3S4L \| pdb_00003s4l	Download File View File

The CRISPR-associated Cas3 HD domain protein MJ0384 from Methanocaldococcus jannaschii

Petit, P., Brown, G., Yakunin, A., Edwards, A., Joachimiak, A., Savchenko, A., Midwest Center for Structural Genomics (MCSG)

(2011) EMBO J 30: 4616-4627

Released	2011-06-22
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Methanocaldococcus jannaschii DSM 2661
Macromolecule	CAS3 Metal dependent phosphohydrolase (protein)
Unique Ligands	CA

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3S8Y \| pdb_00003s8y	Download File View File

Bromide soaked structure of an esterase from the oil-degrading bacterium Oleispira antarctica

Petit, P., Dong, A., Kagan, O., Savchenko, A., Yakunin, A.F.

(2012) Biochem J 445: 193-203

Released	2011-06-15
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Oleispira antarctica
Macromolecule	Esterase APC40077 (protein)
Unique Ligands	BR

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3UMB \| pdb_00003umb	Download File View File

Crystal Structure of the L-2-Haloacid Dehalogenase RSc1362

Petit, P., Chan, P.W.Y., Savchenko, A., Yakunin, A.F., Edwards, E.A., Pai, E.F.

To be published

Released	2012-11-14
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Ralstonia solanacearum
Macromolecule	dehalogenase-like hydrolase (protein)
Unique Ligands	CL, K, MG, NA

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3UMC \| pdb_00003umc	Download File View File

Crystal Structure of the L-2-Haloacid Dehalogenase PA0810

Petit, P., Chan, P.W.Y., Savchenko, A., Yakunin, A.F., Edwards, E.A., Pai, E.F.

To be published

Released	2012-11-14
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	haloacid dehalogenase (protein)
Unique Ligands	CL, NA

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3V85 \| pdb_00003v85	Download File View File

1.9 Angstrom resolution crystal structure of the protein Q9SIY3 from Arabidopsis thaliana

Garcia, C., Fucile, G., Petit, P., Christendat, D.

To be published

Released	2012-11-07
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Arabidopsis thaliana
Macromolecule	CYTH-like phosphatase (protein)
Unique Ligands	CIT

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4GMJ \| pdb_00004gmj	Download File View File

Structure of human NOT1 MIF4G domain co-crystallized with CAF1

Petit, P., Weichenrieder, O., Wohlbold, L., Izaurralde, E.

(2012) Nucleic Acids Res 40: 11058-11072

Released	2012-10-03
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	CCR4-NOT transcription complex subunit 1 (protein) CCR4-NOT transcription complex subunit 7 (protein)
Unique Ligands	CL, GOL, MG