RCSB PDB: Search

1A3K \| pdb_00001a3k	Download File View File

X-RAY CRYSTAL STRUCTURE OF THE HUMAN GALECTIN-3 CARBOHYDRATE RECOGNITION DOMAIN (CRD) AT 2.1 ANGSTROM RESOLUTION

Seetharaman, J., Kanigsberg, A., Slaaby, R., Leffler, H., Barondes, S.H., Rini, J.M.

(1998) J Biological Chem 273: 13047-13052

Released	1998-07-15
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	GALECTIN-3 (protein)
Unique branched monosaccharides	GAL, NAG

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1OPS \| pdb_00001ops	Download File View File

ICE-BINDING SURFACE ON A TYPE III ANTIFREEZE PROTEIN FROM OCEAN POUT

Yang, D.S.C., Hon, W.-C., Bubanko, S., Xue, Y., Seetharaman, J., Hew, C.L., Sicheri, F.

(1998) Biophys J 74: 2142-2151

Released	1998-05-20
Method	X-RAY DIFFRACTION 2 Å
Organisms	Zoarces americanus
Macromolecule	TYPE III ANTIFREEZE PROTEIN (protein)

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1RW0 \| pdb_00001rw0	Download File View File

Crystal structure of protein yfiH from Salmonella enterica serovar Typhi, Pfam DUF152

Seetharaman, J., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2004-08-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi
Macromolecule	conserved hypothetical protein (protein)

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1SGM \| pdb_00001sgm	Download File View File

Crystal Structure of Hypothetical Protein YXAF

Seetharaman, J., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2006) Proteins 63: 1087-1091

Released	2004-08-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bacillus subtilis
Macromolecule	Putative HTH-type transcriptional regulator yxaF (protein)

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1U05 \| pdb_00001u05	Download File View File

Crystal structure of protein yfiH from Shigella flexneri, Pfam DUF152

Seetharaman, J., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2004-08-17
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Shigella flexneri
Macromolecule	orf, conserved hypothetical protein (protein)
Unique Ligands	ZN

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1X94 \| pdb_00001x94	Download File View File

Crystal Structure of a Hypothetical protein

Seetharaman, J., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2006) Proteins 63: 1092-1096

Released	2004-09-14
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Vibrio cholerae
Macromolecule	putative Phosphoheptose isomerase (protein)

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1YBE \| pdb_00001ybe	Download File View File

Crystal Structure of a Nicotinate phosphoribosyltransferase

Seetharaman, J., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2005-01-11
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Agrobacterium tumefaciens
Macromolecule	Nicotinate phosphoribosyltransferase (protein)

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1YDF \| pdb_00001ydf	Download File View File

Crystal structure of a HAD-like phosphatase from Streptococcus pneumoniae

Seetharaman, J., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2005-01-18
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Streptococcus pneumoniae TIGR4
Macromolecule	hydrolase, haloacid dehalogenase-like family (protein)
Unique Ligands	MG

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1YIR \| pdb_00001yir	Download File View File

Crystal Structure of a Nicotinate Phosphoribosyltransferase

Seetharaman, J., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2005-02-01
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Nicotinate phosphoribosyltransferase 2 (protein)
Unique Ligands	SO4

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1YV9 \| pdb_00001yv9	Download File View File

Crystal structure of a HAD-like phosphatase from Enterococcus faecalis V583

Seetharaman, J., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2005-03-15
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Enterococcus faecalis V583
Macromolecule	hydrolase, haloacid dehalogenase family (protein)
Unique Ligands	PO4

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1YYN \| pdb_00001yyn	Download File View File

A common binding site for disialyllactose and a tri-peptide in the C-fragment of tetanus neurotoxin

Seetharaman, J., Eswaramoorthy, S., Kumaran, D., Swaminathan, S.

(2005) Proteins 61: 288-295

Released	2005-03-15
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Clostridium tetani
Macromolecule	Tetanus toxin (protein)
Unique branched monosaccharides	BGC, GLA, SIA

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2A9F \| pdb_00002a9f	Download File View File

Crystal structure of a putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating))

Seetharaman, J., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2005-08-02
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Streptococcus pyogenes
Macromolecule	putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)) (protein)
Unique Ligands	MG

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2DLB \| pdb_00002dlb	Download File View File

X-ray Crystal Structure of Protein yopT from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR412

Kuzin, A.P., Chen, Y., Seetharaman, J., Ho, C.-K., Cunningham, K., Janjua, H., Conover, K., Ma, L.-C., Xiao, R., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2006-04-25
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Bacillus subtilis
Macromolecule	yopT (protein)

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2F20 \| pdb_00002f20	Download File View File

X-ray Crystal Structure of Protein BT_1218 from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium Target BtR8.

Vorobiev, S.M., Abashidze, M., Seetharaman, J., Forouhar, F., Xiao, R., Ma, L.-C., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2005-11-22
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Bacteroides thetaiotaomicron
Macromolecule	conserved hypothetical protein, with conserved domain (protein)

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2F9C \| pdb_00002f9c	Download File View File

Crystal structure of YDCK from Salmonella cholerae. NESG target SCR6

Benach, J., Chen, Y., Vorobiev, S.M., Seetharaman, J., Janjua, H., Cooper, B., Acton, X.T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2005-12-20
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Salmonella enterica
Macromolecule	Hypothetical protein YDCK (protein)
Unique Ligands	CS

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2GTA \| pdb_00002gta	Download File View File

Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR428.

Vorobiev, S.M., Zhou, W., Seetharaman, J., Wang, D., Ma, L.C., Acton, T., Xio, R., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2006-05-23
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Bacillus subtilis
Macromolecule	Hypothetical protein ypjD (protein)
Unique Ligands	NA

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2GTC \| pdb_00002gtc	Download File View File

Crystal structure of the hypthetical protein from Bacillus cereus (ATCC 14579). Northeast structural genomics Target BcR11

Seetharaman, J., Abashidze, M., Forouhar, F., Conover, K., Cooper, B., Ma, L.-C., Xiao, R., Acton, T.B., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2006-05-16
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Bacillus cereus ATCC 14579
Macromolecule	UPF0145 protein BC_1816 (protein)

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2GUJ \| pdb_00002guj	Download File View File

Three dimensional structure of the protein P54332 from Bacillus Subtilis. Northeast Structural Genomics Consortium target sr353.

Kuzin, A.P., Zhou, W., Seetharaman, J., Cunningham, K., Janjua, H., Konover, K., Ma, L.C., Xiao, R., Acton, T., Montelione, G., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2006-05-23
Method	X-RAY DIFFRACTION 3 Å
Organisms	Bacillus subtilis
Macromolecule	Phage-like element PBSX protein xkdM (protein)

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2GZX \| pdb_00002gzx	Download File View File

Crystal Structure of the TatD deoxyribonuclease MW0446 from Staphylococcus aureus. Northeast Structural Genomics Consortium Target ZR237.

Vorobiev, S.M., Neely, H., Seetharaman, J., Wang, D., Fang, Y., Xiao, R., Acton, T., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2006-07-11
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Staphylococcus aureus subsp. aureus MW2
Macromolecule	putative TatD related DNase (protein)
Unique Ligands	NI

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2H3R \| pdb_00002h3r	Download File View File

Crystal structure of ORF52 from Murid herpesvirus 4 (MuHV-4) (Murine gammaherpesvirus 68). Northeast Structural Genomics Consortium target MhR28B.

Benach, J., Chen, Y., Seetharaman, J., Janjua, H., Xiao, R., Cunningham, K., Ma, L.-C., Ho, C.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2006-08-15
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Murid gammaherpesvirus 4
Macromolecule	Hypothetical protein BQLF2 (protein)

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2H4O \| pdb_00002h4o	Download File View File

X-ray Crystal Structure of Protein yonK from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR415

Seetharaman, J., Sue, M., Forouhar, F., Ken, C., Bonnie, C., Ma, L., Xiao, R., Acton, T.B., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2006-07-25
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Bacillus subtilis
Macromolecule	YonK protein (protein)

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2HAE \| pdb_00002hae	Download File View File

Crystal structure of a putative malic enzyme (malate oxidoreductase)

Seetharaman, J., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-07-04
Method	X-RAY DIFFRACTION 3.13 Å
Organisms	Thermotoga maritima
Macromolecule	Malate oxidoreductase (protein)
Unique Ligands	NAD, ZN

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2HAF \| pdb_00002haf	Download File View File

Crystal structure of a putative translation repressor from Vibrio cholerae

Sugadev, R., Seetharaman, J., Kumaran, D., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-07-04
Method	X-RAY DIFFRACTION 2.88 Å
Organisms	Vibrio cholerae
Macromolecule	Putative translation repressor (protein)

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2HF1 \| pdb_00002hf1	Download File View File

Crystal structure of the putative Tetraacyldisaccharide-1-P 4-kinase from Chromobacterium violaceum. NESG target CvR39.

Vorobiev, S.M., Abashidze, M., Seetharaman, J., Chen, C.X., Jiang, M., Cunningham, K., Ma, L.C., Xiao, R., Acton, T., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2006-08-22
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Chromobacterium violaceum ATCC 12472
Macromolecule	Tetraacyldisaccharide-1-P 4-kinase (protein)
Unique Ligands	ZN

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2HQV \| pdb_00002hqv	Download File View File

X-ray Crystal Structure of Protein AGR_C_4470 from Agrobacterium tumefaciens. Northeast Structural Genomics Consortium Target AtR92.

Vorobiev, S.M., Neely, H., Seetharaman, J., Zhao, L., Cunningham, K., Ma, L.C., Fang, Y., Xiao, R., Acton, T., Montelione, T.G., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

(2007) Protein Sci 16: 535-538

Released	2006-09-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Agrobacterium fabrum str. C58
Macromolecule	AGR_C_4470p (protein)

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1A3K | pdb_00001a3k

1OPS | pdb_00001ops

1RW0 | pdb_00001rw0

1SGM | pdb_00001sgm

1U05 | pdb_00001u05

1X94 | pdb_00001x94

1YBE | pdb_00001ybe

1YDF | pdb_00001ydf

1YIR | pdb_00001yir

1YV9 | pdb_00001yv9

1YYN | pdb_00001yyn

2A9F | pdb_00002a9f

2DLB | pdb_00002dlb

2F20 | pdb_00002f20

2F9C | pdb_00002f9c

2GTA | pdb_00002gta

2GTC | pdb_00002gtc

2GUJ | pdb_00002guj

2GZX | pdb_00002gzx

2H3R | pdb_00002h3r

2H4O | pdb_00002h4o

2HAE | pdb_00002hae

2HAF | pdb_00002haf

2HF1 | pdb_00002hf1

2HQV | pdb_00002hqv