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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Turkenburg, J.P."

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Search Summary

This query matches 182 Structures.

Refinements

Structure Determination Methodology

experimental (182)

Scientific Name of Source Organism

	Homo sapiens (32)
	Cellvibrio japonicus (10)
	Bacillus subtilis (9)
	Bacillus amyloliquefaciens (8)
	Bacteroides thetaiotaomicron VPI-5482 (8)
	Campylobacter jejuni (8)
	Staphylococcus aureus subsp. aureus NCTC 8325 (6)
	Streptococcus pyogenes (5)
	Acetivibrio thermocellus (4)
	Cellvibrio mixtus (4)

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Taxonomy

	Bacteria (126)
	Eukaryota (53)
	unclassified bacterial viruses (1)

Experimental Method

	X-RAY DIFFRACTION (180)
	ELECTRON MICROSCOPY (2)

Polymer Entity Type

	Protein (179)
	DNA (3)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (25)
	1.5 - 2.0 (97)
	2.0 - 2.5 (36)
	2.5 - 3.0 (18)
	3.0 - 3.5 (5)

Release Date

	1990 - 1994 (5)
	1995 - 1999 (4)
	2000 - 2004 (27)
	2005 - 2009 (31)
	2010 - 2014 (63)
	2015 - 2019 (43)
	2020 - 2024 (9)

Enzyme Classification Name

	Hydrolases (73)
	Oxidoreductases (12)
	Lyases (11)
	Isomerases (7)
	Transferases (5)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Asymmetric (109)
	Cyclic (54)
	Dihedral (21)
	Icosahedral (2)

SCOP Classification

	Alpha and beta proteins (a/b) (57)
	All beta proteins (25)
	Artifacts (17)
	All alpha proteins (8)
	Alpha and beta proteins (a+b) (7)
	Small proteins (5)

AllSelected

1 to 25 of 182 Structures

Page 1 of 8

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1E3X \| pdb_00001e3x	Download File View File

Native structure of chimaeric amylase from B. amyloliquefaciens and B. licheniformis at 1.92A

Brzozowski, A.M., Lawson, D.M., Turkenburg, J.P., Bisgaard-Frantzen, H., Svendsen, A., Borchert, T.V., Dauter, Z., Wilson, K.S., Davies, G.J.

(2000) Biochemistry 39: 9099

Released	2001-06-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bacillus amyloliquefaciens
Macromolecule	ALPHA-AMYLASE (protein)
Unique Ligands	CA, NA

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1E3Z \| pdb_00001e3z	Download File View File

Acarbose complex of chimaeric amylase from B. amyloliquefaciens and B. licheniformis at 1.93A

Brzozowski, A.M., Lawson, D.M., Turkenburg, J.P., Bisgaard-Frantzen, H., Svendsen, A., Borchert, T.V., Dauter, Z., Wilson, K.S., Davies, G.J.

(2000) Biochemistry 39: 9099

Released	2001-06-21
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Bacillus amyloliquefaciens
Macromolecule	ALPHA-AMYLASE (protein)
Unique Ligands	ACI, CA, NA
Unique branched monosaccharides	GLC, GLD

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1E40 \| pdb_00001e40	Download File View File

Tris/maltotriose complex of chimaeric amylase from B. amyloliquefaciens and B. licheniformis at 2.2A

Brzozowski, A.M., Lawson, D.M., Turkenburg, J.P., Bisgaard-Frantzen, H., Svendsen, A., Borchert, T.V., Dauter, Z., Wilson, K.S., Davies, G.J.

(2000) Biochemistry 39: 9099

Released	2001-06-21
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bacillus amyloliquefaciens
Macromolecule	ALPHA-AMYLASE (protein)
Unique Ligands	CA, NA, TRS
Unique branched monosaccharides	GLC

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1E43 \| pdb_00001e43	Download File View File

Native structure of chimaeric amylase from B. amyloliquefaciens and B. licheniformis at 1.7A

Brzozowski, A.M., Lawson, D.M., Turkenburg, J.P., Bisgaard-Frantzen, H., Svendsen, A., Borchert, T.V., Dauter, Z., Wilson, K.S., Davies, G.J.

(2000) Biochemistry 39: 9099

Released	2001-06-21
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Bacillus amyloliquefaciens
Macromolecule	ALPHA-AMYLASE (protein)
Unique Ligands	CA, NA

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1FSE \| pdb_00001fse	Download File View File

CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS REGULATORY PROTEIN GERE

Ducros, V.M.-A., Lewis, R.J., Verma, C.S., Dodson, E.J., Leonard, G., Turkenburg, J.P., Murshudov, G.N., Wilkinson, A.J., Brannigan, J.A.

(2001) J Mol Biology 306: 759-771

Released	2001-03-21
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Bacillus subtilis
Macromolecule	GERE (protein)
Unique Ligands	GOL, SO4

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1GLO \| pdb_00001glo	Download File View File

Crystal Structure of Cys25Ser mutant of human cathepsin S

Turkenburg, J.P., Lamers, M.B.A.C., Brzozowski, A.M., Wright, L.M., Hubbard, R.E., Sturt, S.L., Williams, D.H.

(2002) Acta Crystallogr D Biol Crystallogr 58: 451

Released	2002-08-29
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	CATHEPSIN S (protein)

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1GQZ \| pdb_00001gqz	Download File View File

Refinement of Haemophilus influenzae Diaminopimelate epimerase at 1.7A

Roper, D.I., Huyton, T., Turkenburg, J.P.

(2004) Acta Crystallogr D Biol Crystallogr 60: 397-400

Released	2003-06-12
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Haemophilus influenzae Rd KW20
Macromolecule	DIAMINOPIMELATE EPIMERASE (protein)

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1GXM \| pdb_00001gxm	Download File View File

Family 10 polysaccharide lyase from Cellvibrio cellulosa

Charnock, S.J., Brown, I.E., Turkenburg, J.P., Black, G.W., Davies, G.J.

(2002) Proc Natl Acad Sci U S A 99: 12067

Released	2002-10-04
Method	X-RAY DIFFRACTION 1.32 Å
Organisms	Cellvibrio japonicus
Macromolecule	PECTATE LYASE (protein)
Unique Ligands	GOL

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1GXN \| pdb_00001gxn	Download File View File

Family 10 polysaccharide lyase from Cellvibrio cellulosa

Charnock, S.J., Brown, I.E., Turkenburg, J.P., Black, G.W., Davies, G.J.

(2002) Proc Natl Acad Sci U S A 99: 12067

Released	2002-10-04
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Cellvibrio japonicus
Macromolecule	PECTATE LYASE (protein)

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1GXO \| pdb_00001gxo	Download File View File

Mutant D189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid

Charnock, S.J., Brown, I.E., Turkenburg, J.P., Black, G.W., Davies, G.J.

(2002) Proc Natl Acad Sci U S A 99: 12067

Released	2002-10-04
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Cellvibrio japonicus
Macromolecule	PECTATE LYASE (protein)
Unique Ligands	CA
Unique branched monosaccharides	ADA

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1GYD \| pdb_00001gyd	Download File View File

Structure of Cellvibrio cellulosa alpha-L-arabinanase

Nurizzo, D., Turkenburg, J.P., Charnock, S.J., Roberts, S.M., Dodson, E.J., McKie, V.A., Taylor, E.J., Gilbert, H.J., Davies, G.J.

(2002) Nat Struct Biol 9: 665-668

Released	2002-08-23
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Cellvibrio japonicus
Macromolecule	ARABINAN ENDO-1,5-ALPHA-L-ARABINOSIDASE A (protein)

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1GYE \| pdb_00001gye	Download File View File

Structure of Cellvibrio cellulosa alpha-L-arabinanase complexed with Arabinohexaose

Nurizzo, D., Turkenburg, J.P., Charnock, S.J., Roberts, S.M., Dodson, E.J., McKie, V.A., Taylor, E.J., Gilbert, H.J., Davies, G.J.

(2002) Nat Struct Biol 9: 665-668

Released	2002-08-23
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Cellvibrio japonicus
Macromolecule	ARABINAN ENDO-1,5-ALPHA-L-ARABINOSIDASE A (protein)
Unique Ligands	CL
Unique branched monosaccharides	AHR

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1GYH \| pdb_00001gyh	Download File View File

Structure of D158A Cellvibrio cellulosa alpha-L-arabinanase mutant

Nurizzo, D., Turkenburg, J.P., Charnock, S.J., Roberts, S.M., Dodson, E.J., McKie, V.A., Taylor, E.J., Gilbert, H.J., Davies, G.J.

(2002) Nat Struct Biol 9: 665

Released	2002-08-23
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Cellvibrio japonicus
Macromolecule	ARABINAN ENDO-1,5-ALPHA-L-ARABINOSIDASE A (protein)
Unique Ligands	CL

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1GZ5 \| pdb_00001gz5	Download File View File

Trehalose-6-phosphate synthase. OtsA

Gibson, R.P., Turkenburg, J.P., Davies, G.J.

(2002) Chem Biol 9: 1337

Released	2003-02-07
Method	X-RAY DIFFRACTION 2.43 Å
Organisms	Escherichia coli str. K-12 substr. W3110
Macromolecule	ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (protein)
Unique Ligands	G6P, IMD, UDP

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1GZR \| pdb_00001gzr	Download File View File

Human Insulin-like growth factor; ESRF data

Brzozowski, A.M., Dodson, E.J., Dodson, G.G., Murshudov, G., Verma, C., Turkenburg, J.P., De Bree, F.M., Dauter, Z.

(2002) Biochemistry 41: 9389

Released	2002-07-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	INSULIN-LIKE GROWTH FACTOR I (protein)
Unique Ligands	C15

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1GZY \| pdb_00001gzy	Download File View File

Human Insulin-like growth factor; In-house data

Brzozowski, A.M., Dodson, E.J., Dodson, G.G., Murshudov, G., Verma, C., Turkenburg, J.P., De Bree, F.M., Dauter, Z.

(2002) Biochemistry 41: 9389

Released	2002-07-25
Method	X-RAY DIFFRACTION 2.54 Å
Organisms	Homo sapiens
Macromolecule	INSULIN-LIKE GROWTH FACTOR I (protein)
Unique Ligands	C15

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1GZZ \| pdb_00001gzz	Download File View File

Human Insulin-like growth factor; Hamburg data

Brzozowski, A.M., Dodson, E.J., Dodson, G.G., Murshudov, G., Verma, C., Turkenburg, J.P., De Bree, F.M., Dauter, Z.

(2002) Biochemistry 41: 9389

Released	2002-07-25
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	INSULIN-LIKE GROWTH FACTOR I (protein)
Unique Ligands	C15

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1H02 \| pdb_00001h02	Download File View File

Human Insulin-like growth factor; SRS Daresbury data

Brzozowski, A.M., Dodson, E.J., Dodson, G.G., Murshudov, G., Verma, C., Turkenburg, J.P., De Bree, F.M., Dauter, Z.

(2002) Biochemistry 41: 9389

Released	2002-07-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	INSULIN-LIKE GROWTH FACTOR I (protein)
Unique Ligands	C15

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1LDN \| pdb_00001ldn	Download File View File

STRUCTURE OF A TERNARY COMPLEX OF AN ALLOSTERIC LACTATE DEHYDROGENASE FROM BACILLUS STEAROTHERMOPHILUS AT 2.5 ANGSTROMS RESOLUTION

Wigley, D.B., Gamblin, S.J., Turkenburg, J.P., Dodson, E.J., Piontek, K., Muirhead, H., Holbrook, J.J.

(1992) J Mol Biology 223: 317-335

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	L-LACTATE DEHYDROGENASE (protein)
Unique Ligands	FBP, NAD, OXM