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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Vey, J.L."

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Search Summary

This query matches 9 Structures.

Refinements

Structure Determination Methodology

experimental (9)

Scientific Name of Source Organism

	Escherichia coli K-12 (3)
	Escherichia coli (2)
	Streptomyces peucetius (2)
	Micromonospora sp. ATCC 39149 (1)
	Synechocystis sp. (1)

Taxonomy

Bacteria (9)

Experimental Method

X-RAY DIFFRACTION (9)

Polymer Entity Type

Protein (9)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (3)
	2.5 - 3.0 (2)
	3.0 - 3.5 (2)

Release Date

	2000 - 2004 (1)
	2005 - 2009 (2)
	2010 - 2014 (1)
	2015 - 2019 (5)

Enzyme Classification Name

	Oxidoreductases (8)
	Transferases (1)

Symmetry Type

	Dihedral (6)
	Asymmetric (2)
	Cyclic (1)

SCOP Classification

Alpha and beta proteins (a/b) (1)

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1 to 9 of 9 Structures

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1T3I \| pdb_00001t3i	Download File View File

Structure of slr0077/SufS, the Essential Cysteine Desulfurase from Synechocystis PCC 6803

Tirupati, B., Vey, J.L., Drennan, C.L., Bollinger Jr., J.M.

(2004) Biochemistry 43: 12210-12219

Released	2004-09-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Synechocystis sp.
Macromolecule	Probable cysteine desulfurase (protein)
Unique Ligands	GOL, PLP
Unique branched monosaccharides	FRU, TU4

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3C8F \| pdb_00003c8f	Download File View File

4Fe-4S-Pyruvate formate-lyase Activating Enzyme with partially disordered AdoMet

Vey, J.L., Drennan, C.L.

(2008) Proc Natl Acad Sci U S A 105: 16137-16141

Released	2008-10-28
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Escherichia coli
Macromolecule	Pyruvate formate-lyase 1-activating enzyme (protein)
Unique Ligands	MT2, PGE, SF4

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3CB8 \| pdb_00003cb8	Download File View File

4Fe-4S-Pyruvate formate-lyase activating enzyme in complex with AdoMet and a peptide substrate

Vey, J.L., Drennan, C.L.

(2008) Proc Natl Acad Sci U S A 105: 16137-16141

Released	2008-10-28
Method	X-RAY DIFFRACTION 2.77 Å
Organisms	Escherichia coli
Macromolecule	Pyruvate formate-lyase 1-activating enzyme (protein) peptide substrate VSGYAV (protein)
Unique Ligands	FMT, NA, SAM, SF4

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3MXL \| pdb_00003mxl	Download File View File

Crystal structure of nitrososynthase from Micromonospora carbonacea var. africana

Vey, J.L., Iverson, T.M.

(2010) Biochemistry 49: 9306-9317

Released	2011-02-09
Method	X-RAY DIFFRACTION 3.15 Å
Organisms	Micromonospora sp. ATCC 39149
Macromolecule	Nitrososynthase (protein)

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4ZXV \| pdb_00004zxv	Download File View File

Streptomyces peucetius nitrososynthase DnmZ in ligand-free state

Sartor, L.M., Vey, J.L.

(2015) Acta Crystallogr F Struct Biol Commun 71: 1205-1214

Released	2015-10-14
Method	X-RAY DIFFRACTION 3 Å
Organisms	Streptomyces peucetius
Macromolecule	DnmZ (protein)

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4ZYJ \| pdb_00004zyj	Download File View File

Streptomyces peucetius nitrososynthase dnmZ in TDP-bound state

Sartor, L.M., Vey, J.L.

(2015) Acta Crystallogr F Struct Biol Commun 71: 1205-1214

Released	2015-10-14
Method	X-RAY DIFFRACTION 2.736 Å
Organisms	Streptomyces peucetius
Macromolecule	DnmZ (protein)
Unique Ligands	TYD

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5CFZ \| pdb_00005cfz	Download File View File

Crystal structure of E. coli FabI in apo form

Jordan, C.A., Vey, J.L.

(2015) Acta Crystallogr F Struct Biol Commun 71: 1521-1530

Released	2015-12-09
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Escherichia coli K-12
Macromolecule	Enoyl-[acyl-carrier-protein] reductase [NADH] FabI (protein)

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5CG1 \| pdb_00005cg1	Download File View File

Crystal structure of E. coli FabI bound to the carbamoylated benzodiazaborine inhibitor 14b.

Jordan, C.A., Vey, J.L.

(2015) Acta Crystallogr F Struct Biol Commun 71: 1521-1530

Released	2015-12-09
Method	X-RAY DIFFRACTION 2.07 Å
Organisms	Escherichia coli K-12
Macromolecule	Enoyl-[acyl-carrier-protein] reductase [NADH] FabI (protein)
Unique Ligands	BBN, NAD

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5CG2 \| pdb_00005cg2	Download File View File

Crystal structure of E. coli FabI bound to the thiocarbamoylated benzodiazaborine inhibitor 35b.

Jordan, C.A., Vey, J.L.

(2015) Acta Crystallogr F Struct Biol Commun 71: 1521-1530

Released	2015-12-09
Method	X-RAY DIFFRACTION 2.11 Å
Organisms	Escherichia coli K-12
Macromolecule	Enoyl-[acyl-carrier-protein] reductase [NADH] FabI (protein)
Unique Ligands	CJ3, NAD

1 to 9 of 9 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1T3I | pdb_00001t3i

Structure of slr0077/SufS, the Essential Cysteine Desulfurase from Synechocystis PCC 6803

3C8F | pdb_00003c8f

4Fe-4S-Pyruvate formate-lyase Activating Enzyme with partially disordered AdoMet

3CB8 | pdb_00003cb8

4Fe-4S-Pyruvate formate-lyase activating enzyme in complex with AdoMet and a peptide substrate

3MXL | pdb_00003mxl

Crystal structure of nitrososynthase from Micromonospora carbonacea var. africana

4ZXV | pdb_00004zxv

Streptomyces peucetius nitrososynthase DnmZ in ligand-free state

4ZYJ | pdb_00004zyj

Streptomyces peucetius nitrososynthase dnmZ in TDP-bound state

5CFZ | pdb_00005cfz

Crystal structure of E. coli FabI in apo form

5CG1 | pdb_00005cg1

Crystal structure of E. coli FabI bound to the carbamoylated benzodiazaborine inhibitor 14b.

5CG2 | pdb_00005cg2

Crystal structure of E. coli FabI bound to the thiocarbamoylated benzodiazaborine inhibitor 35b.

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1T3I | pdb_00001t3i

3C8F | pdb_00003c8f

3CB8 | pdb_00003cb8

3MXL | pdb_00003mxl

4ZXV | pdb_00004zxv

4ZYJ | pdb_00004zyj

5CFZ | pdb_00005cfz

5CG1 | pdb_00005cg1

5CG2 | pdb_00005cg2