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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Zhou, H."

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Search Summary

This query matches 305 Structures.

Refinements

Structure Determination Methodology

experimental (305)

Scientific Name of Source Organism

	Homo sapiens (145)
	Escherichia coli K-12 (35)
	Mus musculus (13)
	Staphylococcus aureus (10)
	Severe acute respiratory syndrome coronavirus 2 (9)
	Staphylococcus aureus subsp. aureus COL (9)
	Escherichia coli (8)
	Salmonella enterica subsp. enterica serovar Cubana str. 76814 (8)
	Saccharomyces cerevisiae S288C (7)
	Human herpesvirus 5 strain AD169 (6)

More...

Taxonomy

	Eukaryota (176)
	Bacteria (106)
	Riboviria (17)
	Duplodnaviria (8)
	Archaea (5)
	other sequences (4)

Experimental Method

	X-RAY DIFFRACTION (259)
	ELECTRON MICROSCOPY (27)
	ELECTRON CRYSTALLOGRAPHY (10)
	SOLUTION NMR (7)
	SOLID-STATE NMR (2)

Polymer Entity Type

	Protein (305)
	RNA (4)
	DNA (3)

Refinement Resolution (Å)

	0.5 - 1.0 (7)
	1.0 - 1.5 (18)
	1.5 - 2.0 (117)
	2.0 - 2.5 (69)
	2.5 - 3.0 (55)
	3.0 - 3.5 (10)
	3.5 - 4.0 (13)
	4.0 - 4.5 (3)
	> 4.5 (4)

Release Date

	1995 - 1999 (2)
	2000 - 2004 (2)
	2005 - 2009 (15)
	2010 - 2014 (13)
	2015 - 2019 (65)
	2020 - 2024 (114)
	2025 - 2029 (94)

Enzyme Classification Name

	Hydrolases (117)
	Ligases (48)
	Isomerases (25)
	Transferases (27)
	Oxidoreductases (5)
	Lyases (5)

Membrane Protein Annotation

	OPM (9)
	PDBTM (9)
	mpstruc (7)
	MemProtMD (5)

Symmetry Type

	Asymmetric (200)
	Cyclic (99)
	Dihedral (4)
	Icosahedral (1)

SCOP Classification

	All alpha proteins (22)
	Alpha and beta proteins (a+b) (23)
	Artifacts (15)
	Alpha and beta proteins (a/b) (15)
	All beta proteins (8)
	Small proteins (4)

AllSelected

1 to 25 of 305 Structures

Page 1 of 13

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1GMY \| pdb_00001gmy	Download File View File

Cathepsin B complexed with dipeptidyl nitrile inhibitor

Greenspan, P.D., Clark, K.L., Tommasi, R.A., Cowen, S.D., McQuire, L.W., Farley, D.L., van Duzer, J.H., Goldberg, R.L., Zhou, H., Du, Z., Fitt, J.J., Coppa, D.E., Fang, Z., Macchia, W., Zhu, L., Capparelli, M.P., Goldstein, R., Wigg, A.M., Doughty, J.R., Bohacek, R.S., Knap, A.K.

(2001) J Med Chem 44: 4524

Released	2002-09-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	CATHEPSIN B (protein)
Unique Ligands	AEM, APD, DFA

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1K0S \| pdb_00001k0s	Download File View File

Solution structure of the chemotaxis protein CheW from the thermophilic organism Thermotoga maritima

Griswold, I.J., Zhou, H., Swanson, R.V., Simon, M.I., Dahlquist, F.W.

(2002) Nat Struct Biol 9: 121-125

Released	2002-02-06
Method	SOLUTION NMR
Organisms	Thermotoga maritima
Macromolecule	CHEMOTAXIS PROTEIN CHEW (protein)

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1NK1 \| pdb_00001nk1	Download File View File

NK1 FRAGMENT OF HUMAN HEPATOCYTE GROWTH FACTOR/SCATTER FACTOR (HGF/SF) AT 2.5 ANGSTROM RESOLUTION

Chirgadze, D.Y., Hepple, J.P., Zhou, H., Byrd, R.A., Blundell, T.L., Gherardi, E.

(1999) Nat Struct Biol 6: 72-79

Released	1999-01-13
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (HEPATOCYTE GROWTH FACTOR PRECURSOR) (protein)

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1T2M \| pdb_00001t2m	Download File View File

Solution Structure Of The Pdz Domain Of AF-6

Zhou, H., Wu, J.H., Xu, Y.Q., Huang, A.D., Shi, Y.Y.

(2005) J Biological Chem 280: 13841-13847

Released	2005-02-08
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	AF-6 protein (protein)

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2HGF \| pdb_00002hgf	Download File View File

HAIRPIN LOOP CONTAINING DOMAIN OF HEPATOCYTE GROWTH FACTOR, NMR, MINIMIZED AVERAGE STRUCTURE

Zhou, H., Mazzulla, M.J., Kaufman, J.D., Stahl, S.J., Wingfield, P.T., Rubin, J.S., Bottaro, D.P., Byrd, R.A.

(1998) Structure 6: 109-116

Released	1998-06-24
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	HEPATOCYTE GROWTH FACTOR (protein)

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2HTJ \| pdb_00002htj	Download File View File

NMR structure of E.coli PapI

Kawamura, T., Zhou, H., Le, L.U.K., Dahlquist, F.W.

(2007) J Mol Biology 365: 1130-1142

Released	2007-01-30
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	P fimbrial regulatory protein KS71A (protein)

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2L4A \| pdb_00002l4a	Download File View File

NMR structure of the DNA-binding domain of E.coli Lrp

Kawamura, T., Zhou, H., Dahlquist, F.W.

(2011) J Mol Biology 409: 311-332

Released	2011-03-09
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	Leucine responsive regulatory protein (protein)

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2LD6 \| pdb_00002ld6	Download File View File

Solution Structure of Histidine Phosphotransfer Domain of CheA

Vu, A., Hamel, D.J., Zhou, H., Dahlquist, F.W.

(2011) J Biomol NMR 51: 49-55

Released	2011-10-12
Method	SOLUTION NMR
Organisms	Thermotoga maritima
Macromolecule	Chemotaxis protein CheA (protein)

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2LP4 \| pdb_00002lp4	Download File View File

Solution structure of P1-CheY/P2 complex in bacterial chemotaxis

Dahlquist, F., Mo, G., Zhou, H., Kamamura, T.

(2012) Biochemistry 51: 3786-3798

Released	2012-10-24
Method	SOLUTION NMR
Organisms	Escherichia coli K-12
Macromolecule	Chemotaxis protein CheA (protein) Chemotaxis protein CheY (protein)

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2MC7 \| pdb_00002mc7	Download File View File

Structure of Salmonella MgtR

Jean-Francois, F., Dai, J., Yu, L., Myrick, A., Rubin, E., Fajer, P., Song, L., Zhou, H., Cross, T.

(2014) J Mol Biology 426: 436-446

Released	2013-10-30
Method	SOLID-STATE NMR
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	Regulatory peptide (protein)

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2MMU \| pdb_00002mmu	Download File View File

Structure of CrgA, a Cell Division Structural and Regulatory Protein from Mycobacterium tuberculosis, in Lipid Bilayers

Das, N., Dai, J., Hung, I., Rajagopalan, M., Zhou, H., Cross, T.A.

(2015) Proc Natl Acad Sci U S A 112: E119-E126

Released	2014-12-17
Method	SOLID-STATE NMR
Organisms	Mycobacterium tuberculosis
Macromolecule	Cell division protein CrgA (protein)

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2Q6J \| pdb_00002q6j	Download File View File

Crystal Structure of Estrogen Receptor alpha Complexed to a B-N Substituted Ligand

Zhou, H., Nettles, K.W., Bruning, J.B., Kim, Y., Joachimiak, A., Sharma, S., Carlson, K.E., Stossi, F., Katzenellenbogen, B.S., Greene, G.L., Katzenellenbogen, J.A.

(2007) Chem Biol 14: 659-669

Released	2007-06-26
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Estrogen receptor (protein) GRIP peptide (protein)
Unique Ligands	A48

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2QA6 \| pdb_00002qa6	Download File View File

Crystal Structure of Estrogen Receptor Alpha mutant 537S Complexed with 4-(6-hydroxy-1H-indazol-3-yl)benzene-1,3-diol

Nettles, K.W., Bruning, J.B., Nowak, J., Sharma, S.K., Hahm, J.B., Shi, Y., Kulp, K., Hochberg, R.B., Zhou, H., Katzenellenbogen, J.A., Katzenellenbogen, B.S., Kim, Y., Joachmiak, A., Greene, G.L.

(2008) Nat Chem Biol 4: 241-247

Released	2008-03-18
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Estrogen receptor (protein) nuclear receptor coactivator 2 (protein)
Unique Ligands	KN2

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2QA8 \| pdb_00002qa8	Download File View File

Crystal Structure of the Estrogen Receptor Alpha Ligand Binding Domain Mutant 537S Complexed with Genistein

Nettles, K.W., Bruning, J.B., Nowak, J., Sharma, S.K., Hahm, J.B., Shi, Y., Kulp, K., Hochberg, R.B., Zhou, H., Katzenellenbogen, J.A., Katzenellenbogen, B.S., Kim, Y., Joachmiak, A., Greene, G.L.

(2008) Nat Chem Biol 4: 241-247

Released	2008-03-18
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Estrogen receptor (protein) nuclear receptor coactivator 2 (protein)
Unique Ligands	GEN

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2QAB \| pdb_00002qab	Download File View File

Crystal Structure of Estrogen Receptor Alpha Ligand Binding Domain Mutant 537S Complexed with an Ethyl Indazole Compound

Nettles, K.W., Bruning, J.B., Nowak, J., Sharma, S.K., Hahm, J.B., Shi, Y., Kulp, K., Hochberg, R.B., Zhou, H., Katzenellenbogen, J.A., Katzenellenbogen, B.S., Kim, Y., Joachmiak, A., Greene, G.L.

(2008) Nat Chem Biol 4: 241-247

Released	2008-03-18
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Estrogen receptor (protein) nuclear receptor coactivator 2 (protein)
Unique Ligands	EI1

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2QGT \| pdb_00002qgt	Download File View File

Crystal Structure of the Estrogen Receptor Alpha Ligand Binding Domain Complexed to an Ether Estradiol Compound

Nettles, K.W., Bruning, J.B., Nowak, J., Sharma, S.K., Hahm, J.B., Shi, Y., Kulp, K., Hochberg, R.B., Zhou, H., Katzenellenbogen, J.A., Katzenellenbogen, B.S., Kim, Y., Joachmiak, A., Greene, G.L.

(2008) Nat Chem Biol 4: 241-247

Released	2008-03-18
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Estrogen receptor (protein) Nuclear receptor coactivator 2 (protein)
Unique Ligands	EED

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2QGW \| pdb_00002qgw	Download File View File

Crystal Structure of the Estrogen Receptor Alpha Ligand Binding Domain Complexed with a Chloro-Indazole Compound

Nettles, K.W., Bruning, J.B., Nowak, J., Sharma, S.K., Hahm, J.B., Shi, Y., Kulp, K., Hochberg, R.B., Zhou, H., Katzenellenbogen, J.A., Katzenellenbogen, B.S., Kim, Y., Joachmiak, A., Greene, G.L.

(2008) Nat Chem Biol 4: 241-247

Released	2008-03-18
Method	X-RAY DIFFRACTION 2.39 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Estrogen receptor (protein) Nuclear receptor coactivator 2 (protein)
Unique Ligands	EES

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2QH6 \| pdb_00002qh6	Download File View File

Crystal Structure of the Estrogen Receptor Alpha Ligand Binding Domain Complexed with an Oxabicyclic diarylethylene Compound

Nettles, K.W., Bruning, J.B., Nowak, J., Sharma, S.K., Hahm, J.B., Shi, Y., Kulp, K., Hochberg, R.B., Zhou, H., Katzenellenbogen, J.A., Katzenellenbogen, B.S., Kim, Y., Joachmiak, A., Greene, G.L.

(2008) Nat Chem Biol 4: 241-247

Released	2008-03-18
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Estrogen receptor (protein) Nuclear receptor coactivator 2 (protein)
Unique Ligands	ODE

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2QXM \| pdb_00002qxm	Download File View File

Crystal Structure of the Estrogen Receptor Alpha Ligand Binding Domain Complexed to Burned Meat Compound PhIP

Nettles, K.W., Bruning, J.B., Gil, G., Nowak, J., Sharma, S.K., Hahm, J.B., Shi, Y., Kulp, K., Hochberg, R.B., Zhou, H., Katzenellenbogen, J.A., Katzenellenbogen, B.S., Kim, Y., Joachmiak, A., Greene, G.L.

(2008) Nat Chem Biol 4: 241-247

Released	2008-03-18
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Estrogen receptor (protein) Nuclear receptor coactivator 2 (protein)
Unique Ligands	PIQ

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2V0C \| pdb_00002v0c	Download File View File

LEUCYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH A SULPHAMOYL ANALOGUE OF LEUCYL-ADENYLATE In the synthetic site and an adduct of AMP with 5-Fluoro-1,3-dihydro-1-hydroxy-2,1-benzoxaborole (AN2690) in the editing site

Rock, F., Mao, W., Yaremchuk, A., Tukalo, M., Crepin, T., Zhou, H., Zhang, Y., Hernandez, V., Akama, T., Baker, S., Plattner, J., Shapiro, L., Martinis, S.A., Benkovic, S.J., Cusack, S., Alley, M.R.K.

(2007) Science 316: 1759

Released	2007-07-03
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Thermus thermophilus
Macromolecule	AMINOACYL-TRNA SYNTHETASE (protein)
Unique Ligands	ANZ, LEU, LMS, SO4, ZN

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2V0G \| pdb_00002v0g	Download File View File

LEUCYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH A tRNA(leu) transcript with 5-FLUORO-1,3-DIHYDRO-1-HYDROXY-2,1- BENZOXABOROLE (AN2690) forming an adduct to the ribose of adenosine- 76 in the enzyme editing site.

(2007) Science 316: 1759

Released	2007-07-03
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Thermus thermophilus
Macromolecule	AMINOACYL-TRNA SYNTHETASE (protein) TRNALEU (nucleic acid)
Unique Ligands	HG, LEU, SO4, ZN

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3CYV \| pdb_00003cyv	Download File View File

Crystal structure of uroporphyrinogen decarboxylase from Shigella flexineri: new insights into its catalytic mechanism

Liu, H., Zhou, H., Bi, R.

To be published

Released	2009-04-28
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Shigella flexneri
Macromolecule	Uroporphyrinogen decarboxylase (protein)

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3EHQ \| pdb_00003ehq	Download File View File

Crystal Structure of Human Osteoclast Stimulating Factor

Tong, S., Zhou, H., Gao, Y., Zhu, Z., Zhang, X., Teng, M., Niu, L.

(2009) Proteins 75: 245-251

Released	2009-08-04
Method	X-RAY DIFFRACTION 2.57 Å
Organisms	Homo sapiens
Macromolecule	Osteoclast-stimulating factor 1 (protein)
Unique Ligands	EDO

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3EHR \| pdb_00003ehr	Download File View File

Crystal Structure of Human Osteoclast Stimulating Factor

Tong, S., Zhou, H., Gao, Y., Zhu, Z., Zhang, X., Teng, M., Niu, L.

(2009) Proteins 75: 245-251

Released	2009-08-04
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Osteoclast-stimulating factor 1 (protein)

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3H3B \| pdb_00003h3b	Download File View File

Crystal structure of the single-chain Fv (scFv) fragment of an anti-ErbB2 antibody chA21 in complex with residues 1-192 of ErbB2 extracellular domain

Zhou, H., Liu, Y., Niu, L., Zhu, J., Teng, M.

(2011) J Biological Chem 286: 31676-31683

Released	2010-04-28
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Receptor tyrosine-protein kinase erbB-2 (protein) anti-ErbB2 antibody chA21 (protein)

1 to 25 of 305 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1GMY | pdb_00001gmy

1K0S | pdb_00001k0s

1NK1 | pdb_00001nk1

1T2M | pdb_00001t2m

2HGF | pdb_00002hgf

2HTJ | pdb_00002htj

2L4A | pdb_00002l4a

2LD6 | pdb_00002ld6

2LP4 | pdb_00002lp4

2MC7 | pdb_00002mc7

2MMU | pdb_00002mmu

2Q6J | pdb_00002q6j

2QA6 | pdb_00002qa6

2QA8 | pdb_00002qa8

2QAB | pdb_00002qab

2QGT | pdb_00002qgt

2QGW | pdb_00002qgw

2QH6 | pdb_00002qh6

2QXM | pdb_00002qxm

2V0C | pdb_00002v0c

2V0G | pdb_00002v0g

3CYV | pdb_00003cyv

3EHQ | pdb_00003ehq

3EHR | pdb_00003ehr

3H3B | pdb_00003h3b