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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Ballut, L."

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Search Summary

This query matches 35 Structures.

Refinements

Structure Determination Methodology

experimental (35)

Scientific Name of Source Organism

	Plasmodium falciparum 3D7 (10)
	Pseudopedobacter saltans DSM 12145 (4)
	Nakaseomyces glabratus CBS 138 (3)
	Bacillus subtilis (2)
	Homo sapiens (2)
	Nakaseomyces glabratus (2)
	Paraglaciecola sp. T6c (2)
	Pectobacterium carotovorum (2)
	Enterococcus faecium (1)
	Haemophilus influenzae (1)

More...

Taxonomy

	Eukaryota (18)
	Bacteria (17)

Experimental Method

X-RAY DIFFRACTION (35)

Polymer Entity Type

	Protein (35)
	RNA (1)

Refinement Resolution (Å)

	1.5 - 2.0 (8)
	2.0 - 2.5 (13)
	2.5 - 3.0 (6)
	3.0 - 3.5 (5)
	3.5 - 4.0 (3)

Release Date

	2005 - 2009 (2)
	2015 - 2019 (9)
	2020 - 2024 (24)

Enzyme Classification Name

	Hydrolases (10)
	Transferases (11)
	Lyases (5)
	Ligases (4)

Symmetry Type

	Asymmetric (19)
	Cyclic (10)
	Dihedral (6)

SCOP Classification

	Alpha and beta proteins (a+b) (1)
	Alpha and beta proteins (a/b) (2)
	Artifacts (2)
	All beta proteins (1)

AllSelected

1 to 25 of 35 Structures

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2HXY \| pdb_00002hxy	Download File View File

Crystal structure of human apo-eIF4AIII

Johansen, J.S., Andersen, G.R.

(2006) Science 313: 1968-1972

Released	2006-08-15
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Homo sapiens
Macromolecule	Probable ATP-dependent RNA helicase DDX48 (protein)

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2HYI \| pdb_00002hyi	Download File View File

Structure of the human exon junction complex with a trapped DEAD-box helicase bound to RNA

Andersen, C.B.F., Le Hir, H., Andersen, G.R.

(2006) Science 313: 1968-1972

Released	2006-08-15
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Probable ATP-dependent RNA helicase DDX48 (protein) Protein CASC3 (protein) Protein mago nashi homolog (protein) RNA-binding protein 8A (protein) 5'-R(UPUPUPUPUPU)-3' (nucleic acid)
Unique Ligands	ANP, MG

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4U49 \| pdb_00004u49	Download File View File

Crystal structure of Pectate Lyase Pel3 from Pectobacterium carotovorum with two monomers in the A.U

Ballut, L., Gouet, P., Shevchik, V.

To be published

Released	2015-08-05
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Pectobacterium carotovorum
Macromolecule	Pectate lyase (protein)
Unique Ligands	CA

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4U4B \| pdb_00004u4b	Download File View File

Crystal Structure of Pectate Lyase Pel3 from Pectobacterium carotovorum with one monomer in the A.U.

Ballut, L., Gouet, P., Shevchik, V.E.

To be published

Released	2015-08-05
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Pectobacterium carotovorum
Macromolecule	Pectate lyase (protein)
Unique Ligands	EDO, SO4

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4WIM \| pdb_00004wim	Download File View File

Crystal Structure of the GMP Synthetase from Plasmodium falciparum

Ballut, L., Violot, S., Haser, R., Aghajari, N.

(2015) Nat Commun 6: 8930-8930

Released	2015-12-02
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	GMP synthetase (protein)

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4WIN \| pdb_00004win	Download File View File

Crystal structure of the GATase domain from Plasmodium falciparum GMP synthetase

Ballut, L., Violot, S., Haser, R., Aghajari, N.

(2015) Nat Commun 6: 8930-8930

Released	2015-12-02
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	GMP synthetase (protein)
Unique Ligands	NO3

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4WIO \| pdb_00004wio	Download File View File

Crystal structure of the C89A GMP synthetase inactive mutant from Plasmodium falciparum in complex with glutamine

Ballut, L., Violot, S., Haser, R., Aghajari, N.

(2015) Nat Commun 6: 8930-8930

Released	2015-12-02
Method	X-RAY DIFFRACTION 3.15 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	GMP synthetase (protein)
Unique Ligands	GLN

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5MVR \| pdb_00005mvr	Download File View File

Crystal structure of Bacillus subtilus YdiB

Jault, J.-M., Aghajari, N.

(2017) J Mol Biology 429: 3056-3074

Released	2017-09-20
Method	X-RAY DIFFRACTION 1.762 Å
Organisms	Bacillus subtilis
Macromolecule	tRNA threonylcarbamoyladenosine biosynthesis protein TsaE (protein)
Unique Ligands	ADP, EDO, MG

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5NP9 \| pdb_00005np9	Download File View File

Crystal structure of Bacillus subtilis YdiB in complex with ADP

Ballut, L., Aghajari, N.

(2017) J Mol Biology 429: 3056-3074

Released	2018-05-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bacillus subtilis
Macromolecule	tRNA threonylcarbamoyladenosine biosynthesis protein TsaE (protein)
Unique Ligands	ADP, MG

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6HXE \| pdb_00006hxe	Download File View File

Crystal structure of psychrophilic phosphoglycerate kinase from Pseudomonas TACII18 in complex with 3-phosphoglycerate

Mandelman, D., Haser, R., Aghajari, N.

(2019) Extremophiles 23: 495-506

Released	2019-06-12
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Pseudomonas sp. 'TAC II 18
Macromolecule	Phosphoglycerate kinase (protein)
Unique Ligands	3PG

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6I06 \| pdb_00006i06	Download File View File

Crystal structure of psychrophilic phosphoglycerate kinase from Pseudomonas TACII18

Mandelman, D., Haser, R., Aghajari, N.

(2019) Extremophiles 23: 495-506

Released	2019-06-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas
Macromolecule	Phosphoglycerate kinase (protein)

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6RMD \| pdb_00006rmd	Download File View File

Structure of ATP bound Plasmodium falciparum IMP-nucleotidase

Carrique, L., Ballut, L., Violot, S., Aghajari, N.

(2020) Nat Commun 11: 3228-3228

Released	2020-07-15
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	IMP-specific 5'-nucleotidase, putative (protein)
Unique Ligands	ATP, EDO

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6RME \| pdb_00006rme	Download File View File

Structure of IMP bound Plasmodium falciparum IMP-nucleotidase mutant D172N

Carrique, L., Ballut, L., Violot, S., Aghajari, N.

(2020) Nat Commun 11: 3228-3228

Released	2020-07-08
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	IMP-specific 5'-nucleotidase, putative (protein)
Unique Ligands	GOL, IMP, MG

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6RMO \| pdb_00006rmo	Download File View File

Structure of Plasmodium falciparum IMP-nucleotidase

Carrique, L., Ballut, L., Violot, S., Aghajari, N.

(2020) Nat Commun 11: 3228-3228

Released	2020-07-15
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	IMP-specific 5'-nucleotidase, putative (protein)

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6RMW \| pdb_00006rmw	Download File View File

Structure of N-terminal truncated IMP bound Plasmodium falciparum IMP-nucleotidase

Carrique, L., Ballut, L., Violot, S., Aghajari, N.

(2020) Nat Commun 11: 3228-3228

Released	2020-07-15
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	IMP-specific 5'-nucleotidase, putative (protein)
Unique Ligands	GOL, IMP, MG

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6RN1 \| pdb_00006rn1	Download File View File

Structure of N-terminal truncated Plasmodium falciparum IMP-nucleotidase

Carrique, L., Ballut, L., Violot, S., Aghajari, N.

(2020) Nat Commun 11: 3228-3228

Released	2020-07-15
Method	X-RAY DIFFRACTION 3 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	IMP-specific 5'-nucleotidase, putative (protein)

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6RNH \| pdb_00006rnh	Download File View File

Structure of C-terminal truncated Plasmodium falciparum IMP-nucleotidase

Carrique, L., Ballut, L., Violot, S., Aghajari, N.

(2020) Nat Commun 11: 3228-3228

Released	2020-07-15
Method	X-RAY DIFFRACTION 3.7 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	IMP-specific 5'-nucleotidase, putative (protein)
Unique Ligands	GOL

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7O77 \| pdb_00007o77	Download File View File

Structure of the PL6 family alginate lyase Patl3640 from Pseudoalteromonas atlantica T6c

Ballut, L., Violot, S., Carrique, L., Aghajari, N.

(2021) Glycobiology 31: 1557-1570

Released	2021-07-28
Method	X-RAY DIFFRACTION 2.321 Å
Organisms	Paraglaciecola sp. T6c
Macromolecule	Poly(Beta-D-mannuronate) lyase (protein)
Unique Ligands	GOL

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7O78 \| pdb_00007o78	Download File View File

Structure of the PL6 family chondroitinase B from Pseudopedobacter saltans, Pedsa3807

Ballut, L., Violot, S., Carrique, L., Aghajari, N.

(2021) Glycobiology 31: 1557-1570

Released	2021-07-28
Method	X-RAY DIFFRACTION 1.58 Å
Organisms	Pseudopedobacter saltans DSM 12145
Macromolecule	Polysaccharide lyase from Pseudopedobacter saltans, Pedsa3807 (protein)

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7O79 \| pdb_00007o79	Download File View File

Structure of the PL6 family polysaccharide lyase Pedsa3628 from Pseudopedobacter saltans

Ballut, L., Violot, S., Carrique, L., Aghajari, N.

(2021) Glycobiology 31: 1557-1570

Released	2021-07-28
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Pseudopedobacter saltans DSM 12145
Macromolecule	Poly(Beta-D-mannuronate) lyase (protein)
Unique Ligands	PO4

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7O7A \| pdb_00007o7a	Download File View File

Structure of the PL6 family alginate lyase Pedsa0632 from Pseudopedobacter saltans

Ballut, L., Violot, S., Carrique, L., Aghajari, N.

(2021) Glycobiology 31: 1557-1570

Released	2021-07-28
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Pseudopedobacter saltans DSM 12145
Macromolecule	Aliginate lyase (protein)

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7O7T \| pdb_00007o7t	Download File View File

Structure of the PL6 family alginate lyase Patl3640 from Pseudoalteromonas atlantica T6c in complex with 4-deoxy-L-erythro-5-hexoseulose uronic acid

Ballut, L., Violot, S., Carrique, L., Aghajari, N.

(2021) Glycobiology 31: 1557-1570

Released	2021-07-28
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Paraglaciecola sp. T6c
Macromolecule	Poly(Beta-D-mannuronate) lyase (protein)
Unique Ligands	EDO, GOL, V4W

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7O84 \| pdb_00007o84	Download File View File

Structure of the PL6 family alginate lyase Pedsa0632 from Pseudopedobacter saltans in complex with substrate

Ballut, L., Violot, S., Carrique, L., Aghajari, N.

(2021) Glycobiology 31: 1557-1570

Released	2021-07-28
Method	X-RAY DIFFRACTION 2.177 Å
Organisms	Pseudopedobacter saltans DSM 12145
Macromolecule	Alginate lyase (protein)
Unique branched monosaccharides	LGU, MAW

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7P43 \| pdb_00007p43	Download File View File

Structure of CgGBE in complex with maltotriose

Ballut, L., Conchou, L., Violot, S., Galisson, F., Aghajari, N.

(2022) Glycobiology 32: 343-355

Released	2022-07-27
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Nakaseomyces glabratus CBS 138
Macromolecule	1,4-alpha-glucan-branching enzyme (protein)
Unique branched monosaccharides	GLC

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7P44 \| pdb_00007p44	Download File View File

Structure of CgGBE in P21212 space group

Ballut, L., Conchou, L., Violot, S., Galisson, F., Aghajari, N.

(2022) Glycobiology 32: 343-355

Released	2022-07-27
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Nakaseomyces glabratus CBS 138
Macromolecule	1,4-alpha-glucan-branching enzyme (protein)
Unique Ligands	EDO

1 to 25 of 35 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2HXY | pdb_00002hxy

2HYI | pdb_00002hyi

4U49 | pdb_00004u49

4U4B | pdb_00004u4b

4WIM | pdb_00004wim

4WIN | pdb_00004win

4WIO | pdb_00004wio

5MVR | pdb_00005mvr

5NP9 | pdb_00005np9

6HXE | pdb_00006hxe

6I06 | pdb_00006i06

6RMD | pdb_00006rmd

6RME | pdb_00006rme

6RMO | pdb_00006rmo

6RMW | pdb_00006rmw

6RN1 | pdb_00006rn1

6RNH | pdb_00006rnh

7O77 | pdb_00007o77

7O78 | pdb_00007o78

7O79 | pdb_00007o79

7O7A | pdb_00007o7a

7O7T | pdb_00007o7t

7O84 | pdb_00007o84

7P43 | pdb_00007p43

7P44 | pdb_00007p44