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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Cheng, W."

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Search Summary

This query matches 203 Structures.

Refinements

Structure Determination Methodology

experimental (203)

Scientific Name of Source Organism

	Homo sapiens (93)
	Cytaeis uchidae (11)
	Streptococcus pneumoniae TIGR4 (9)
	synthetic construct (9)
	Listeria monocytogenes 10403S (5)
	Oryza sativa Japonica Group (5)
	Danio rerio (4)
	Nostoc sp. PCC 7120 = FACHB-418 (4)
	Stevia rebaudiana (4)
	Aeropyrum pernix K1 (3)

More...

Taxonomy

	Eukaryota (140)
	Bacteria (50)
	other sequences (9)
	Duplodnaviria (6)
	Archaea (5)
	Riboviria (5)
	Varidnaviria (2)

Experimental Method

	X-RAY DIFFRACTION (199)
	ELECTRON MICROSCOPY (4)

Polymer Entity Type

	Protein (203)
	DNA (5)
	RNA (4)

Refinement Resolution (Å)

	1.0 - 1.5 (8)
	1.5 - 2.0 (63)
	2.0 - 2.5 (67)
	2.5 - 3.0 (37)
	3.0 - 3.5 (20)
	3.5 - 4.0 (6)
	4.0 - 4.5 (2)

Release Date

	2010 - 2014 (27)
	2015 - 2019 (42)
	2020 - 2024 (132)
	2025 - 2029 (2)

Enzyme Classification Name

	Transferases (89)
	Hydrolases (26)
	Oxidoreductases (12)
	Lyases (2)
	Isomerases (1)
	Ligases (2)

Membrane Protein Annotation

	PDBTM (8)
	MemProtMD (7)
	mpstruc (7)
	OPM (6)

Symmetry Type

	Asymmetric (138)
	Cyclic (66)
	Dihedral (3)

SCOP Classification

	Alpha and beta proteins (a+b) (9)
	Alpha and beta proteins (a/b) (11)
	All alpha proteins (2)
	Artifacts (3)
	All beta proteins (1)

AllSelected

1 to 25 of 203 Structures

Page 1 of 9

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3LFM \| pdb_00003lfm	Download File View File

Crystal structure of the fat mass and obesity associated (FTO) protein reveals basis for its substrate specificity

Chai, J., Han, Z.

(2010) Nature 464: 1205-1209

Released	2010-04-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Protein fto (protein)
Unique Ligands	3DT, FE2, OGA

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3QFL \| pdb_00003qfl	Download File View File

Coiled-Coil Domain-Dependent Homodimerization of Intracellular MLA Immune Receptors Defines a Minimal Functional Module for Triggering Cell Death

Chai, J., Cheng, W.

(2011) Cell Host Microbe 9: 187-199

Released	2011-05-04
Method	X-RAY DIFFRACTION 1.997 Å
Organisms	Hordeum vulgare
Macromolecule	MLA10 (protein)

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3QFM \| pdb_00003qfm	Download File View File

Crystal structure of Streptococcal asymmetric Ap4A hydrolase and phosphodiesterase Spr1479/SapH

Jiang, Y.L., Zhang, J.W., Yu, W.L., Cheng, W., Zhang, C.C., Zhou, C.Z., Chen, Y.

To be published

Released	2011-08-24
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Streptococcus pneumoniae R6
Macromolecule	Putative uncharacterized protein (protein)
Unique Ligands	FE, MN

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3QFN \| pdb_00003qfn	Download File View File

Crystal structure of Streptococcal asymmetric Ap4A hydrolase and phosphodiesterase Spr1479/SapH in complex with inorganic phosphate

Jiang, Y.L., Zhang, J.W., Yu, W.L., Cheng, W., Zhang, C.C., Zhou, C.Z., Chen, Y.

To be published

Released	2011-08-24
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Streptococcus pneumoniae R6
Macromolecule	Putative uncharacterized protein (protein)
Unique Ligands	FE, MN, PO4

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3QFO \| pdb_00003qfo	Download File View File

Crystal structure of Streptococcal asymmetric Ap4A hydrolase and phosphodiesterase Spr1479/SapH im complex with AMP

Jiang, Y.L., Zhang, J.W., Yu, W.L., Cheng, W., Zhang, C.C., Zhou, C.Z., Chen, Y.

To be published

Released	2011-08-24
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Streptococcus pneumoniae R6
Macromolecule	Putative uncharacterized protein (protein)
Unique Ligands	AMP, FE, MN

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3RGX \| pdb_00003rgx	Download File View File

Structural insight into brassinosteroid perception by BRI1

Chai, J., Han, Z., She, J., Wang, J., Cheng, W., Wang, J.

(2011) Nature 474: 472-476

Released	2011-06-15
Method	X-RAY DIFFRACTION 2.47 Å
Organisms	Arabidopsis thaliana
Macromolecule	Protein BRASSINOSTEROID INSENSITIVE 1 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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3RGZ \| pdb_00003rgz	Download File View File

Structural insight into brassinosteroid perception by BRI1

Chai, J., Han, Z., She, J., Wang, J., Cheng, W.

(2011) Nature 474: 472-476

Released	2011-06-15
Method	X-RAY DIFFRACTION 2.281 Å
Organisms	Arabidopsis thaliana
Macromolecule	Protein BRASSINOSTEROID INSENSITIVE 1 (protein)
Unique Ligands	BLD, NAG, SO4
Unique branched monosaccharides	NAG

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3SFV \| pdb_00003sfv	Download File View File

Crystal structure of the GDP-bound Rab1a S25N mutant in complex with the coiled-coil domain of LidA from Legionella pneumophila

Yin, K., Lu, D., Zhu, D., Zhang, H., Li, B., Xu, S., Gu, L.

(2012) PLoS Pathog 8: e1002528-e1002528

Released	2012-04-18
Method	X-RAY DIFFRACTION 1.73 Å
Organisms	Homo sapiens Legionella pneumophila str. Corby
Macromolecule	LidA protein, substrate of the Dot/Icm system (protein) Ras-related protein Rab-1A (protein)
Unique Ligands	GDP

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3TKL \| pdb_00003tkl	Download File View File

Crystal structure of the GTP-bound Rab1a in complex with the coiled-coil domain of LidA from Legionella pneumophila

Cheng, W., Yin, K., Lu, D., Li, B., Zhu, D., Chen, Y., Zhang, H., Xu, S., Chai, J., Gu, L.

(2012) PLoS Pathog 8: e1002528-e1002528

Released	2012-06-27
Method	X-RAY DIFFRACTION 2.183 Å
Organisms	Homo sapiens Legionella pneumophila str. Corby
Macromolecule	LidA protein, substrate of the Dot/Icm system (protein) Ras-related protein Rab-1A (protein)
Unique Ligands	GTP, MG

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3TL8 \| pdb_00003tl8	Download File View File

The AvrPtoB-BAK1 complex reveals two structurally similar kinaseinteracting domains in a single type III effector

Chai, J., Cheng, W., Gao, H.

(2011) Cell Host Microbe 10: 616-626

Released	2012-01-11
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Arabidopsis thaliana Pseudomonas syringae pv. tomato
Macromolecule	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 (protein) Effector protein HopAB2 (protein)

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4AW5 \| pdb_00004aw5	Download File View File

Complex of the EphB4 kinase domain with an oxindole inhibitor

Till, J.H., Stout, T.J.

(2012) Bioorg Med Chem Lett 22: 4979

Released	2012-08-01
Method	X-RAY DIFFRACTION 2.33 Å
Organisms	Homo sapiens
Macromolecule	EPHRIN TYPE-B RECEPTOR 4 (protein)
Unique Ligands	30K

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4E8C \| pdb_00004e8c	Download File View File

Crystal structure of streptococcal beta-galactosidase in complex with galactose

Cheng, W., Wang, L., Bai, X.H., Jiang, Y.L., Li, Q., Yu, G., Zhou, C.Z., Chen, Y.X.

(2012) J Biological Chem 287: 22910-22918

Released	2012-05-30
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Streptococcus pneumoniae TIGR4
Macromolecule	Glycosyl hydrolase, family 35 (protein)
Unique Ligands	GAL, GOL

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4E8D \| pdb_00004e8d	Download File View File

Crystal structure of streptococcal beta-galactosidase

Cheng, W., Wang, L., Bai, X.H., Jiang, Y.L., Li, Q., Yu, G., Zhou, C.Z., Chen, Y.X.

(2012) J Biological Chem 287: 22910-22918

Released	2012-05-30
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Streptococcus pneumoniae TIGR4
Macromolecule	Glycosyl hydrolase, family 35 (protein)
Unique Ligands	GOL

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4HMO \| pdb_00004hmo	Download File View File

Crystal structure of streptococcus pneumoniae TIGR4 PiaA in complex with Bis-tris propane

Cheng, W., Li, Q., Jiang, Y.-L., Chen, Y., Zhou, C.-Z.

(2013) PLoS One 8: e71451-e71451

Released	2013-09-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Streptococcus pneumoniae TIGR4
Macromolecule	Iron-compound ABC transporter, iron compound-binding protein (protein)
Unique Ligands	B3P, GOL

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4HMP \| pdb_00004hmp	Download File View File

Crystal structure of iron uptake ABC transporter substrate-binding protein PiaA from Streptococcus pneumoniae TIGR4

Cheng, W., Li, Q., Jiang, Y.-L., Chen, Y., Zhou, C.-Z.

(2013) PLoS One 8: e71451-e71451

Released	2013-09-04
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Streptococcus pneumoniae TIGR4
Macromolecule	Iron-compound ABC transporter, iron compound-binding protein (protein)
Unique Ligands	CD, EDO, GOL, PG4

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4HMQ \| pdb_00004hmq	Download File View File

Crystal structure of streptococcus pneumoniae TIGR4 PiaA in complex with ferrichrome

Cheng, W., Li, Q., Jiang, Y.-L., Chen, Y., Zhou, C.-Z.

(2013) PLoS One 8: e71451-e71451

Released	2013-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Streptococcus pneumoniae TIGR4
Macromolecule	Iron-compound ABC transporter, iron compound-binding protein (protein)
Unique Ligands	CD, CL, EDO, FCE, PGE

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4IPL \| pdb_00004ipl	Download File View File

The crystal structure of 6-phospho-beta-glucosidase BglA-2 from Streptococcus pneumoniae

Yu, W.L., Jiang, Y.L., Andreas, P., Cheng, W., Bai, X.H., Ren, Y.M., Thompsonn, J., Zhou, C.Z., Chen, Y.X.

(2013) J Biological Chem 288: 14949-14958

Released	2013-04-24
Method	X-RAY DIFFRACTION 2.004 Å
Organisms	Streptococcus pneumoniae TIGR4
Macromolecule	6-phospho-beta-glucosidase (protein)
Unique Ligands	GOL

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4IPN \| pdb_00004ipn	Download File View File

The complex structure of 6-phospho-beta-glucosidase BglA-2 with thiocellobiose-6P from Streptococcus pneumoniae

Yu, W.L., Jiang, Y.L., Andreas, P., Cheng, W., Bai, X.H., Ren, Y.M., Thompsonn, J., Zhou, C.Z., Chen, Y.X.

(2013) J Biological Chem 288: 14949-14958

Released	2013-04-24
Method	X-RAY DIFFRACTION 2.411 Å
Organisms	Streptococcus pneumoniae TIGR4
Macromolecule	6-phospho-beta-glucosidase (protein)
Unique branched monosaccharides	RTG, SGC

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4K6N \| pdb_00004k6n	Download File View File

Crystal structure of yeast 4-amino-4-deoxychorismate lyase

Dai, Y.-N., Chi, C.-B., Zhou, K., Cheng, W., Jiang, Y.-L., Ren, Y.-M., Chen, Y., Zhou, C.-Z.

(2013) J Biological Chem 288: 22985-22992

Released	2013-07-10
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Aminodeoxychorismate lyase (protein)
Unique Ligands	PLP

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4LMA \| pdb_00004lma	Download File View File

Crystal structure analysis of O-acetylserine sulfhydrylase CysK1 from Microcystis aeruginosa 7806

Lu, M.

(2014) Biochim Biophys Acta 1844: 308-315

Released	2014-06-04
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Microcystis aeruginosa PCC 7806
Macromolecule	Cysteine synthase (protein)
Unique Ligands	MPD, PLP

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4LMB \| pdb_00004lmb	Download File View File

Crystal structure analysis of O-acetylserine sulfhydrylase CysK2 complexed with cystine from Microcystis aeruginosa 7806

Lu, M.

(2014) Biochim Biophys Acta 1844: 308-315

Released	2014-06-04
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Microcystis aeruginosa PCC 7806
Macromolecule	Cysteine synthase (protein)
Unique Ligands	CYS, PLP

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4NV2 \| pdb_00004nv2	Download File View File

C50A mutant of Synechococcus VKOR, C2221 crystal form

Liu, S., Cheng, W., Fowle Grider, R., Shen, G., Li, W.

(2014) Nat Commun 5: 3110-3110

Released	2014-02-12
Method	X-RAY DIFFRACTION 3.61 Å
Organisms	Synechococcus sp. JA-2-3B'a(2-13)
Macromolecule	VKORC1/thioredoxin domain protein (protein)
Unique Ligands	U10

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4NV5 \| pdb_00004nv5	Download File View File

C50A mutant of Synechococcus VKOR, C2 crystal form (dehydrated)

Liu, S., Cheng, W., Fowle Grider, R., Shen, G., Li, W.

(2014) Nat Commun 5: 3110-3110

Released	2014-02-12
Method	X-RAY DIFFRACTION 2.79 Å
Organisms	Synechococcus sp. JA-2-3B'a(2-13)
Macromolecule	VKORC1/thioredoxin domain protein (protein)
Unique Ligands	U10

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4NV6 \| pdb_00004nv6	Download File View File

C212A mutant of Synechococcus VKOR

Liu, S., Cheng, W., Fowle Grider, R., Shen, G., Li, W.

(2014) Nat Commun 5: 3110-3110

Released	2014-02-12
Method	X-RAY DIFFRACTION 4.19 Å
Organisms	Synechococcus sp. JA-2-3B'a(2-13)
Macromolecule	VKORC1/thioredoxin domain protein (protein)
Unique Ligands	U10