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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Cole, A.R."

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Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Homo sapiens (5)
	Mus musculus (3)
	Aequorea victoria (1)
	Bos taurus (1)
	Drosophila melanogaster (1)
	Vibrio cholerae (1)
	Yersinia enterocolitica W22703 (1)

Taxonomy

	Eukaryota (8)
	Bacteria (2)

Experimental Method

	ELECTRON MICROSCOPY (5)
	X-RAY DIFFRACTION (5)

Polymer Entity Type

Protein (10)

Refinement Resolution (Å)

	1.5 - 2.0 (4)
	2.0 - 2.5 (2)
	3.0 - 3.5 (1)
	3.5 - 4.0 (1)
	4.0 - 4.5 (2)

Release Date

	2010 - 2014 (4)
	2015 - 2019 (3)
	2020 - 2024 (3)

Enzyme Classification Name

	Hydrolases (2)
	Transferases (1)

Membrane Protein Annotation

	OPM (2)
	PDBTM (2)
	mpstruc (1)
	MemProtMD (1)

Symmetry Type

	Asymmetric (6)
	Cyclic (4)
	Tetrahedral (1)

SCOP Classification

	Alpha and beta proteins (a+b) (4)
	All beta proteins (1)
	Artifacts (1)

AllSelected

1 to 10 of 10 Structures

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4HOI \| pdb_00004hoi	Download File View File

Crystal structure of PAS domain from the mouse EAG1 potassium channel

Adaixo, R., Morais-Cabral, J.H.

(2013) PLoS One 8: e59265-e59265

Released	2013-03-27
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Mus musculus
Macromolecule	Potassium voltage-gated channel subfamily H member 1 (protein)
Unique Ligands	SO4

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4HP4 \| pdb_00004hp4	Download File View File

Crystal structure of PAS domain from the fruit-fly ELK potassium channel

Adaixo, R., Morais-Cabral, J.H.

(2013) PLoS One 8: e59265-e59265

Released	2013-03-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Drosophila melanogaster
Macromolecule	Eag-like K[+] channel (protein)
Unique Ligands	GOL, SO4

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4HP9 \| pdb_00004hp9	Download File View File

Crystal structure of the N-terminal truncated PAS domain from the hERG potassium channel

Adaixo, R., Morais-Cabral, J.H., Harley, C.A.

(2013) PLoS One 8: e59265-e59265

Released	2013-03-27
Method	X-RAY DIFFRACTION 2.12 Å
Organisms	Homo sapiens
Macromolecule	Potassium voltage-gated channel subfamily H member 2 (protein)

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4HQA \| pdb_00004hqa	Download File View File

Crystal structure of PAS domain from the human ERG (hERG) potassium channel

Adaixo, R., Morais-Cabral, J.H., Harley, C.A.

(2013) PLoS One 8: e59265-e59265

Released	2013-03-27
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Homo sapiens
Macromolecule	Potassium voltage-gated channel subfamily H member 2 (protein)

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6QNK \| pdb_00006qnk	Download File View File

Antibody FAB fragment targeting Gi protein heterotrimer

Tsai, C.-J., Muehle, J., Pamula, F., Dawson, R.J.P., Maeda, S., Deupi, X., Schertler, G.F.X.

(2019) Elife 8:

Released	2019-07-10
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Mus musculus
Macromolecule	FAB heavy chain (protein) FAB light chain (protein)
Unique Ligands	EDO, MLT, PG4, PGE

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6QNO \| pdb_00006qno	Download File View File

Rhodopsin-Gi protein complex

Tsai, C.-J., Marino, J., Adaixo, R.J., Pamula, F., Muehle, J., Maeda, S., Flock, T., Taylor, N.M.I., Mohammed, I., Matile, H., Dawson, R.J.P., Deupi, X., Stahlberg, H., Schertler, G.F.X.

(2019) Elife 8:

Released	2019-07-10
Method	ELECTRON MICROSCOPY 4.38 Å
Organisms	Bos taurus Homo sapiens Mus musculus
Macromolecule	Unique protein chains: 6
Unique Ligands	RET
Unique branched monosaccharides	NAG

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6RIU \| pdb_00006riu	Download File View File

C-terminal domain of TssA protein from T6SS of Vibrio cholerae.

Nazarov, S., Basler, M.

(2019) EMBO J 38: e100825-e100825

Released	2019-08-21
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Vibrio cholerae
Macromolecule	Type VI secretion system protein TssA (protein)

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6YL3 \| pdb_00006yl3	Download File View File

High resolution cryo-EM structure of urease from the pathogen Yersinia enterocolitica

Righetto, R.D., Anton, L., Adaixo, R., Jakob, R., Zivanov, J., Mahi, M.A., Ringler, P., Schwede, T., Maier, T., Stahlberg, H.

(2020) Nat Commun 11: 5101-5101

Released	2020-05-06
Method	ELECTRON MICROSCOPY 1.98 Å
Organisms	Yersinia enterocolitica W22703
Macromolecule	Urease subunit alpha (protein) Urease subunit beta (protein) Urease subunit gamma (protein)
Unique Ligands	NI

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7AA5 \| pdb_00007aa5	Download File View File

Human TRPV4 structure in presence of 4a-PDD

Botte, M., Ulrich, A.K.G., Adaixo, R., Gnutt, D., Brockmann, A., Bucher, D., Chami, M., Bocquet, M., Ebbinghaus-Kintscher, U., Puetter, V., Becker, A., Egner, U., Stahlberg, H., Hennig, M., Holton, S.J.

To be published

Released	2021-08-18
Method	ELECTRON MICROSCOPY 4.18 Å
Organisms	Aequorea victoria Homo sapiens
Macromolecule	Transient receptor potential cation channel subfamily V member 4,Green fluorescent protein (protein)
Unique Ligands	CA

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7B75 \| pdb_00007b75	Download File View File

Cryo-EM Structure of Human Thyroglobulin

Adaixo, R., Righetto, R., Steiner, E.M., Taylor, N.M.I., Stahlberg, H.

(2022) Nat Commun 13: 61-61

Released	2021-12-29
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Homo sapiens
Macromolecule	Thyroglobulin (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

1 to 10 of 10 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

4HOI | pdb_00004hoi

Crystal structure of PAS domain from the mouse EAG1 potassium channel

4HP4 | pdb_00004hp4

Crystal structure of PAS domain from the fruit-fly ELK potassium channel

4HP9 | pdb_00004hp9

Crystal structure of the N-terminal truncated PAS domain from the hERG potassium channel

4HQA | pdb_00004hqa

Crystal structure of PAS domain from the human ERG (hERG) potassium channel

6QNK | pdb_00006qnk

Antibody FAB fragment targeting Gi protein heterotrimer

6QNO | pdb_00006qno

Rhodopsin-Gi protein complex

6RIU | pdb_00006riu

C-terminal domain of TssA protein from T6SS of Vibrio cholerae.

6YL3 | pdb_00006yl3

High resolution cryo-EM structure of urease from the pathogen Yersinia enterocolitica

7AA5 | pdb_00007aa5

Human TRPV4 structure in presence of 4a-PDD

7B75 | pdb_00007b75

Cryo-EM Structure of Human Thyroglobulin

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

4HOI | pdb_00004hoi

4HP4 | pdb_00004hp4

4HP9 | pdb_00004hp9

4HQA | pdb_00004hqa

6QNK | pdb_00006qnk

6QNO | pdb_00006qno

6RIU | pdb_00006riu

6YL3 | pdb_00006yl3

7AA5 | pdb_00007aa5

7B75 | pdb_00007b75