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233,249 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Hagai, T."

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Search Summary

This query matches 49 Structures.

Refinements

Structure Determination Methodology

experimental (49)

Scientific Name of Source Organism

	Human immunodeficiency virus 1 (8)
	Homo sapiens (7)
	Morganella morganii (5)
	Primolicivirus Pf1 (5)
	Enterobacteria phage fd (4)
	Anguilla japonica (3)
	Shigella flexneri (3)
	Morone chrysops x Morone saxatilis (2)
	Morone saxatilis (2)
	Pseudomonas protegens Pf-5 (2)

More...

Taxonomy

	Eukaryota (17)
	Bacteria (12)
	Monodnaviria (9)
	Riboviria (9)
	Eukaryota (eukaryotes) (2)

Experimental Method

	SOLUTION NMR (27)
	SOLID-STATE NMR (22)
	FIBER DIFFRACTION (1)
	X-RAY DIFFRACTION (1)

Polymer Entity Type

Protein (49)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	3.0 - 3.5 (1)

Release Date

	1995 - 1999 (11)
	2000 - 2004 (11)
	2005 - 2009 (9)
	2010 - 2014 (13)
	2015 - 2019 (5)

Enzyme Classification Name

	Hydrolases (2)
	Translocases (2)
	Isomerases (1)
	Lyases (1)

Membrane Protein Annotation

	MemProtMD (12)
	PDBTM (12)
	OPM (11)
	mpstruc (7)

Symmetry Type

	Asymmetric (45)
	Cyclic (3)
	Helical (1)

SCOP Classification

	Peptides (13)
	Alpha and beta proteins (a+b) (6)
	Coiled coil proteins (6)
	All alpha proteins (2)
	Small proteins (1)

AllSelected

1 to 25 of 49 Structures

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1A11 \| pdb_00001a11	Download File View File

NMR STRUCTURE OF MEMBRANE SPANNING SEGMENT 2 OF THE ACETYLCHOLINE RECEPTOR IN DPC MICELLES, 10 STRUCTURES

Gesell, J.J., Sun, W., Montal, M., Opella, S.J.

(1999) Nat Struct Biol 6: 374-379

Released	1998-04-08
Method	SOLUTION NMR
Organisms	Rattus norvegicus
Macromolecule	ACETYLCHOLINE RECEPTOR M2 (protein)

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1A1U \| pdb_00001a1u	Download File View File

SOLUTION STRUCTURE DETERMINATION OF A P53 MUTANT DIMERIZATION DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE

Mccoy, M.A., Stavridi, E.S., Waterman, J.L.F., Wieczorek, A., Opella, S.J., Halezonetis, T.D.

(1997) EMBO J 16: 6230-6236

Released	1998-04-08
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	P53 (protein)

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1AFI \| pdb_00001afi	Download File View File

STRUCTURE OF THE REDUCED FORM OF MERP, THE PERIPLASMIC PROTEIN FROM THE BACTERIAL MERCURY DETOXIFICATION SYSTEM, NMR, 20 STRUCTURES

Steele, R.A., Opella, S.J.

(1997) Biochemistry 36: 6885-6895

Released	1997-07-23
Method	SOLUTION NMR
Organisms	Shigella flexneri
Macromolecule	MERP (protein)

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1AFJ \| pdb_00001afj	Download File View File

STRUCTURE OF THE MERCURY-BOUND FORM OF MERP, THE PERIPLASMIC PROTEIN FROM THE BACTERIAL MERCURY DETOXIFICATION SYSTEM, NMR, 20 STRUCTURES

Steele, R.A., Opella, S.J.

(1997) Biochemistry 36: 6885-6895

Released	1997-07-23
Method	SOLUTION NMR
Organisms	Shigella flexneri
Macromolecule	MERP (protein)
Unique Ligands	HG

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1BKU \| pdb_00001bku	Download File View File

EFFECTS OF GLYCOSYLATION ON THE STRUCTURE AND DYNAMICS OF EEL CALCITONIN, NMR, 10 STRUCTURES

Hashimoto, Y., Nishikido, J., Toma, K., Yamamoto, K., Haneda, K., Inazu, T., Valentine, K., Opella, S.J.

(1999) Biochemistry 38: 8377-8384

Released	1999-01-13
Method	SOLUTION NMR
Organisms	Anguilla japonica
Macromolecule	CALCITONIN (protein)

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1BYV \| pdb_00001byv	Download File View File

GLYCOSYLATED EEL CALCITONIN

Hashimoto, Y., Toma, K., Nishikido, J., Yamamoto, K., Haneda, K., Inazu, T., Valentine, K.G., Opella, S.J.

(1999) Biochemistry 38: 8377-8384

Released	1998-10-28
Method	SOLUTION NMR
Organisms	Anguilla japonica
Macromolecule	PROTEIN (CALCITONIN) (protein)
Unique Ligands	NAG

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1BZB \| pdb_00001bzb	Download File View File

GLYCOSYLATED EEL CALCITONIN

Hashimoto, Y., Toma, K., Nishikido, J., Yamamoto, K., Haneda, K., Inazu, T., Valentine, K., Opella, S.J.

(1999) Biochemistry 38: 8377-8384

Released	1998-11-11
Method	SOLUTION NMR
Organisms	Anguilla japonica
Macromolecule	PROTEIN (CALCITONIN) (protein)
Unique branched monosaccharides	MAN, NAG

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1CEK \| pdb_00001cek	Download File View File

THREE-DIMENSIONAL STRUCTURE OF THE MEMBRANE-EMBEDDED M2 CHANNEL-LINING SEGMENT FROM THE NICOTINIC ACETYLCHOLINE RECEPTOR BY SOLID-STATE NMR SPECTROSCOPY

Marassi, F.M., Gesell, J.J., Kim, Y., Valente, A.P., Oblatt-Montal, M., Montal, M., Opella, S.J.

(1999) Nat Struct Biol 6: 374-379

Released	1999-03-11
Method	SOLID-STATE NMR
Organisms	Rattus norvegicus
Macromolecule	PROTEIN (ACETYLCHOLINE RECEPTOR M2) (protein)

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1DVW \| pdb_00001dvw	Download File View File

NMR structure of 18 residue peptide from merp protein

Veglia, G., Porcelli, F., De Silva, T.M., Prantner, A.M., Opella, S.J.

(2000) J Am Chem Soc 122: 2389-2390

Released	2003-12-23
Method	SOLUTION NMR
Organisms	Shigella flexneri
Macromolecule	18 RESIDUE PEPTIDE FROM MERP PROTEIN (protein)
Unique Ligands	HG

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1EQ8 \| pdb_00001eq8	Download File View File

THREE-DIMENSIONAL STRUCTURE OF THE PENTAMERIC HELICAL BUNDLE OF THE ACETYLCHOLINE RECEPTOR M2 TRANSMEMBRANE SEGMENT

Marassi, F.M., Gesell, J.J., Kim, Y., Valente, A.P., Oblatt-Montal, M., Montal, M., Opella, S.J.

(1999) Nat Struct Biol 6: 374-379

Released	2000-04-26
Method	SOLID-STATE NMR
Organisms	Tetronarce californica
Macromolecule	ACETYLCHOLINE RECEPTOR PROTEIN (protein)

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1FDM \| pdb_00001fdm	Download File View File

FD MAJOR COAT PROTEIN IN SDS MICELLES, NMR, 20 STRUCTURES

Almeida, F.C.L., Opella, S.J.

(1997) J Mol Biology 270: 481-495

Released	1997-09-17
Method	SOLUTION NMR
Organisms	Enterobacteria phage fd
Macromolecule	FD MAJOR COAT PROTEIN (protein)

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1KVI \| pdb_00001kvi	Download File View File

Solution Structure of the Reduced Form of the First Heavy Metal Binding Motif of the Menkes Protein

De Silva, T.M., Veglia, G., Opella, S.J.

(2005) Proteins 61: 1038-1049

Released	2003-11-18
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Copper-transporting ATPase 1 (protein)

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1KVJ \| pdb_00001kvj	Download File View File

Solution Structure of the Cu(I) bound form of the first heavy metal binding motif of the Menkes protein

De Silva, T.M., Veglia, G., Opella, S.J.

(2005) Proteins 61: 1038-1049

Released	2003-11-18
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Copper-transporting ATPase 1 (protein)
Unique Ligands	CU1

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1MZT \| pdb_00001mzt	Download File View File

NMR structure of the fd bacteriophage pVIII coat protein in lipid bilayer membranes

Marassi, F.M., Opella, S.J.

(2003) Protein Sci 12: 403-411

Released	2002-11-27
Method	SOLID-STATE NMR
Organisms	Enterobacteria phage fd
Macromolecule	major coat protein pVIII (protein)

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1NH4 \| pdb_00001nh4	Download File View File

Structure of the coat protein in fd filamentous bacteriophage particles

Zeri, A.C., Mesleh, M.F., Nevzorov, A.A., Opella, S.J.

(2003) Proc Natl Acad Sci U S A 100: 6458-6463

Released	2003-05-06
Method	SOLID-STATE NMR
Organisms	Enterobacteria phage fd
Macromolecule	Major coat protein (protein)

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1PI7 \| pdb_00001pi7	Download File View File

Structure of the channel-forming trans-membrane domain of Virus protein "u" (Vpu) from HIV-1

Park, S.H., Mrse, A.A., Nevzorov, A.A., Mesleh, M.F., Oblatt-Montal, M., Montal, M., Opella, S.J.

(2003) J Mol Biology 333: 409-424

Released	2003-11-11
Method	SOLID-STATE NMR
Organisms	Human immunodeficiency virus 1
Macromolecule	VPU protein (protein)

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1PI8 \| pdb_00001pi8	Download File View File

Structure of the channel-forming trans-membrane domain of Virus protein "u" (Vpu) from HIV-1

Park, S.H., Mrse, A.A., Nevzorov, A.A., Mesleh, M.F., Oblatt-Montal, M., Montal, M., Opella, S.J.

(2003) J Mol Biology 333: 409-424

Released	2003-11-11
Method	SOLID-STATE NMR
Organisms	Human immunodeficiency virus 1
Macromolecule	VPU protein (protein)

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1PJD \| pdb_00001pjd	Download File View File

Structure and Topology of a Peptide Segment of the 6th Transmembrane Domain of the Saccharomyces cerevisiae alpha-Factor Receptor in Phospholipid Bilayers

Valentine, K.G., Liu, S.-F., Marassi, F.M., Veglia, G., Nevzorov, A.A., Opella, S.J., Ding, F.-X., Wang, S.-H., Arshava, B., Becker, J.M., Naider, F.

(2001) Biopolymers 59: 243-256

Released	2003-09-16
Method	SOLID-STATE NMR
Organisms	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	Pheromone alpha factor receptor (protein)