RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Huang, Y."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 38 Structures.

Refinements

Structure Determination Methodology

experimental (38)

Scientific Name of Source Organism

	synthetic construct (26)
	Homo sapiens (13)
	Mus musculus (1)

Taxonomy

	other sequences (26)
	Eukaryota (13)

Experimental Method

	SOLUTION NMR (35)
	X-RAY DIFFRACTION (2)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

Protein (38)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	2.0 - 2.5 (1)
	2.5 - 3.0 (1)

Release Date

	2015 - 2019 (25)
	2020 - 2024 (13)

Enzyme Classification Name

Hydrolases (1)

Membrane Protein Annotation

PDBTM (1)

Symmetry Type

Asymmetric (25)

AllSelected

1 to 25 of 38 Structures

Page 1 of 2

Sort by

Explore in 3D

2ND2 \| pdb_00002nd2	Download File View File

Solution structure of the de novo mini protein gHHH_06

Pulavarti, S.V., Eletsky, A., Bahl, C.D., Buchko, G.W., Baker, D., Szyperski, T.

(2016) Nature 538: 329-335

Released	2016-09-21
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	De novo mini protein HHH_06 (protein)

Explore in 3D

2ND3 \| pdb_00002nd3	Download File View File

Solution structure of the de novo mini protein gEEH_04

Pulavarti, S.V., Bahl, C.D., Gilmore, J.M., Eletsky, A., Buchko, G.W., Baker, D., Szyperski, T.

(2016) Nature 538: 329-335

Released	2016-09-21
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	De novo mini protein EEH_04 (protein)

Explore in 3D

5JG9 \| pdb_00005jg9	Download File View File

Crystal structure of the de novo mini protein gEHEE_06

Rupert, P.B., Johnsen, W.A.

(2016) Nature 538: 329-335

Released	2016-09-28
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	synthetic construct
Macromolecule	de novo design, hyper stable, disulfide-rich mini protein (protein)
Unique Ligands	CL, GOL

Explore in 3D

5JHI \| pdb_00005jhi	Download File View File

Solution structure of the de novo mini protein gEHE_06

Buchko, G.W., Bahl, C.D., Gilmore, J.M., Pulavarti, S.V., Baker, D., Szyperski, T.

(2016) Nature 538: 329-335

Released	2016-09-28
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	W35 (protein)

Explore in 3D

5JI4 \| pdb_00005ji4	Download File View File

Solution structure of the de novo mini protein gEEHE_02

Buchko, G.W., Bahl, C.D., Pulavarti, S.V., Baker, D., Szyperski, T.

(2016) Nature 538: 329-335

Released	2016-09-28
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	W37 (protein)

Explore in 3D

5KVN \| pdb_00005kvn	Download File View File

NMR Solution Structure of Designed Peptide NC_HEE_D1

Harvey, P.J., Craik, D.J.

(2016) Nature 538: 329-335

Released	2016-09-21
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	Designed peptide NC_HEE_D1 (protein)

Explore in 3D

5KWO \| pdb_00005kwo	Download File View File

NMR Solution Structure of Designed Peptide NC_EHE_D1

Harvey, P.J., Craik, D.J.

(2016) Nature 538: 329-335

Released	2016-09-21
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	Designed peptide NC_EHE_D1 (protein)

Explore in 3D

5KWP \| pdb_00005kwp	Download File View File

NMR Solution Structure of Designed Peptide NC_EEH_D2

Harvey, P.J., Craik, D.J.

(2016) Nature 538: 329-335

Released	2016-09-21
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	Designed peptide NC_EEH_D2 (protein)

Explore in 3D

5KWX \| pdb_00005kwx	Download File View File

NMR Solution Structure of Designed Peptide NC_EEH_D1

Harvey, P.J., Craik, D.J.

(2016) Nature 538: 329-335

Released	2016-09-21
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	Designed peptide NC_EEH_D1 (protein)

Explore in 3D

5KWZ \| pdb_00005kwz	Download File View File

NMR Solution Structure of Designed Peptide NC_cHH_D1

Harvey, P.J., Craik, D.J.

(2016) Nature 538: 329-335

Released	2016-09-21
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	Designed peptide NC_cHH_D1 (protein)

Explore in 3D

5KX0 \| pdb_00005kx0	Download File View File

NMR Solution Structure of Designed Peptide NC_cHh_DL_D1

Harvey, P.J., Craik, D.J.

(2016) Nature 538: 329-335

Released	2016-09-21
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	Designed peptide NC_cHh_DL_D1 (protein)

Explore in 3D

5KX1 \| pdb_00005kx1	Download File View File

NMR Solution Structure of Designed Peptide NC_cHHH_D1

Harvey, P.J., Craik, D.J.

(2016) Nature 538: 329-335

Released	2016-09-21
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	Designed peptide NC_cHHH_D1 (protein)

Explore in 3D

5KX2 \| pdb_00005kx2	Download File View File

NMR Solution Structure of Designed Peptide NC_cEE_D1

Harvey, P.J., Craik, D.J.

(2016) Nature 538: 329-335

Released	2016-09-21
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	Designed peptide NC_cEE_D1 (protein)

Explore in 3D

6BE7 \| pdb_00006be7	Download File View File

Solution structure of de novo macrocycle Design8.1

Shortridge, M.D., Hosseinzadeh, P., Pardo-Avila, F., Varani, G., Baker, D.

(2017) Science 358: 1461-1466

Released	2018-01-03
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	DDPT(DPR)(DAR)Q(DGN) (protein)

Explore in 3D

6BE9 \| pdb_00006be9	Download File View File

Solution structure of de novo macrocycle design7.1

Shortridge, M.D., Hosseinzadeh, P., Pardo-Avila, F., Varani, G., Baker, B.

(2017) Science 358: 1461-1466

Released	2017-12-27
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	T(DLY)NDT(DSG)(DPR) (protein)

Explore in 3D

6BEN \| pdb_00006ben	Download File View File

Solution structure of de novo macrocycle design8.2

Shortridge, M.D., Hosseinzadeh, P., Pardo-Avila, F., Varani, G., Baker, B.

(2017) Science 358: 1461-1466

Released	2017-12-27
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	(DAR)Q(DPR)(DGN)R(DGL)PQ (protein)

Explore in 3D

6BEO \| pdb_00006beo	Download File View File

Solution structure of de novo macrocycle design9.1

Shortridge, M.D., Hosseinzadeh, P., Pardo-Avila, F., Varani, G., Baker, D.

(2017) Science 358: 1461-1466

Released	2017-12-27
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	(DPR)PY(DHI)PKDL(DGN) (protein)

Explore in 3D

6BEQ \| pdb_00006beq	Download File View File

Solution structure of de novo macrocycle design10.1

Shortridge, M.D., Hosseinzadeh, P., Pardo-Avila, F., Varani, G., Baker, D.

(2017) Science 358: 1461-1466

Released	2018-01-10
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	AAR(DVA)(DPR)R(DLE)(DTH)PE (protein)

Explore in 3D

6BER \| pdb_00006ber	Download File View File

Solution structure of de novo macrocycle design10.2

Shortridge, M.D., Hosseinzadeh, P., Pardo-Avila, F., Varani, G., Baker, D.

(2017) Science 358: 1461-1466

Released	2017-12-27
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	E(DVA)DP(DGL)(DHI)(DPR)N(DAL)(DPR) (protein)

Explore in 3D

6BES \| pdb_00006bes	Download File View File

Solution structure of de novo macrocycle design11_ss

Shortridge, M.D., Hosseinzadeh, P., Pardo-Avila, F., Varani, G., Baker, D.

(2017) Science 358: 1461-1466

Released	2017-12-27
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	(DAL)Q(DPR)(DCY)(DLY)DS(DTY)(DCY)P(DSN) (protein)

Explore in 3D

6BET \| pdb_00006bet	Download File View File

Solution structure of de novo macrocycle design12_ss

Shortridge, M.D., Hosseinzadeh, P., Pardo-Avila, F., Varani, G., Baker, D.

(2017) Science 358: 1461-1466

Released	2017-12-27
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	H(DPR)(DVA)CIP(DPR)E(DLY)VC(DGL) (protein)

Explore in 3D

6BEU \| pdb_00006beu	Download File View File

Solution structure of de novo macrocycle design14_ss

Shortridge, M.D., Hosseinzadeh, P., Pardo-Avila, F., Varani, G., Baker, D.

(2017) Science 358: 1461-1466

Released	2017-12-27
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	(DCY)N(DVA)(DPR)DVYC(DPR)(DSG)KY(DVA)(DPR) (protein)

Explore in 3D

6BEW \| pdb_00006bew	Download File View File

Solution structure of de novo macrocycle design7.2

Shortridge, M.D., Hosseinzadeh, P., Pardo-Avila, F., Varani, G., Baker, D.

(2017) Science 358: 1461-1466

Released	2017-12-27
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	(DHI)P(DAS)(DGN)(DSN)(DGL)P (protein)

Explore in 3D

6BF3 \| pdb_00006bf3	Download File View File

Solution structure of de novo macrocycle design7.3a

Shortridge, M.D., Hosseinzadeh, P., Pardo-Avila, F., Varani, G., Baker, D.

(2017) Science 358: 1461-1466

Released	2018-01-10
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	QDP(DPR)K(2TL)(DAS) (protein)

Explore in 3D

6BF5 \| pdb_00006bf5	Download File View File

Solution structure of de novo macrocycle design7.3a

Shortridge, M.D., Hosseinzadeh, P., Pardo-Avila, F., Varani, G., Baker, D.

(2017) Science 358: 1461-1466

Released	2018-01-10
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	QDP(DPR)K(DTH)(DAS) (protein)

1 to 25 of 38 Structures

Page 1 of 2

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

2ND2 | pdb_00002nd2

2ND3 | pdb_00002nd3

5JG9 | pdb_00005jg9

5JHI | pdb_00005jhi

5JI4 | pdb_00005ji4

5KVN | pdb_00005kvn

5KWO | pdb_00005kwo

5KWP | pdb_00005kwp

5KWX | pdb_00005kwx

5KWZ | pdb_00005kwz

5KX0 | pdb_00005kx0

5KX1 | pdb_00005kx1

5KX2 | pdb_00005kx2

6BE7 | pdb_00006be7

6BE9 | pdb_00006be9

6BEN | pdb_00006ben

6BEO | pdb_00006beo

6BEQ | pdb_00006beq

6BER | pdb_00006ber

6BES | pdb_00006bes

6BET | pdb_00006bet

6BEU | pdb_00006beu

6BEW | pdb_00006bew

6BF3 | pdb_00006bf3

6BF5 | pdb_00006bf5