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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Katiki, M."

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Search Summary

This query matches 19 Structures.

Refinements

Structure Determination Methodology

experimental (19)

Scientific Name of Source Organism

	Escherichia coli 536 (4)
	Acinetobacter baumannii (3)
	Homo sapiens (3)
	Moraxella catarrhalis BBH18 (3)
	Cutibacterium acnes HL110PA3 (2)
	Providencia alcalifaciens F90-2004 (2)
	Cutibacterium acnes HL043PA1 (1)
	Wrightia tinctoria (1)

Taxonomy

	Bacteria (15)
	Eukaryota (4)

Experimental Method

X-RAY DIFFRACTION (19)

Polymer Entity Type

	Protein (19)
	DNA (2)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.0 - 2.5 (9)
	2.5 - 3.0 (6)
	3.0 - 3.5 (1)

Release Date

	2015 - 2019 (4)
	2020 - 2024 (15)

Enzyme Classification Name

	Lyases (5)
	Hydrolases (3)
	Oxidoreductases (3)
	Ligases (1)

Symmetry Type

	Asymmetric (8)
	Cyclic (7)
	Dihedral (4)

SCOP Classification

Multi-domain proteins (alpha and beta) (3)

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1 to 19 of 19 Structures

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4Y0O	Download File View File

Crystal structure of OXA-58, a carbapenem hydrolyzing Class D beta-lactamase from Acinetobacter baumanii.

Pratap, S., Katiki, M., Gill, P., Golemi-Kotra, D., Kumar, P.

(2015) Antimicrob Agents Chemother 60: 75-86

Released	2016-01-13
Method	X-RAY DIFFRACTION 2.37 Å
Organisms	Acinetobacter baumannii
Macromolecule	Beta-lactamase (protein)

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4Y0T	Download File View File

Crystal structure of apo form of OXA-58, a Carbapenem hydrolyzing Class D beta-lactamase from Acinetobacter baumanii (P21, 4mol/ASU)

Pratap, S., Katiki, M., Gill, P., Golemi-Kotra, D., Kumar, P.

(2015) Antimicrob Agents Chemother 60: 75-86

Released	2016-01-13
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Acinetobacter baumannii
Macromolecule	Beta-lactamase (protein)

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4Y0U	Download File View File

Crystal Structure of 6Alpha-Hydroxymethylpenicillanate Complexed with OXA-58, a Carbapenem hydrolyzing Class D betalactamase from Acinetobacter baumanii.

Pratap, S., Katiki, M., Gill, P., Golemi-Kotra, D., Kumar, P.

(2015) Antimicrob Agents Chemother 60: 75-86

Released	2016-01-13
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Acinetobacter baumannii
Macromolecule	Beta-lactamase (protein)
Unique Ligands	ALP

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5WXU	Download File View File

11S globulin from Wrightia tinctoria reveals auxin binding site

Kumar, P., Kesari, P., Dhindwal, S., Kumar, P.

(2017) Sci Rep 7: 4705-4705

Released	2018-05-23
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Wrightia tinctoria
Macromolecule	11S globulin (protein)
Unique Ligands	FLC, GOL, IAC, PEG, PO4

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6LK2	Download File View File

Crystal structure of Providencia alcalifaciens 3-dehydroquinate synthase (DHQS) in complex with Mg2+, NAD and chlorogenic acid

Neetu, N., Katiki, M., Kumar, P.

(2020) J Bacteriol 202:

Released	2020-07-29
Method	X-RAY DIFFRACTION 2.503 Å
Organisms	Providencia alcalifaciens F90-2004
Macromolecule	3-dehydroquinate synthase (protein)
Unique Ligands	7LH, EDO, MG, NAD, PEG

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6LLA	Download File View File

Crystal structure of Providencia alcalifaciens 3-dehydroquinate synthase (DHQS) in complex with Mg2+ and NAD

Neetu, N., Katiki, M., Kumar, P.

(2020) J Bacteriol 202:

Released	2020-07-29
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Providencia alcalifaciens F90-2004
Macromolecule	3-dehydroquinate synthase (protein)
Unique Ligands	EDO, MG, NAD, PEG

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7DOA	Download File View File

Crystal structure of Catabolite repressor acivator from E. coli in complex with HEPES

Neetu, N., Katiki, M., Kumar, P.

To be published

Released	2021-12-22
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Escherichia coli 536
Macromolecule	Catabolite repressor/activator (protein)
Unique Ligands	EPE, GOL

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7DOB	Download File View File

Crystal structure of Catabolite repressor activator (Apo)

Neetu, N., Katiki, M., Kumar, P.

To be published

Released	2021-12-22
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli 536
Macromolecule	Catabolite repressor/activator (protein)
Unique Ligands	EDO, MG, PO4

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7F44	Download File View File

Crystal structure of Moraxella catarrhalis enoyl-ACP-reductase (FabI) in complex with the cofactor NAD

Katiki, M., Neetu, N., Pratap, S., Kumar, P.

(2022) Biochimie 198: 8-22

Released	2022-06-22
Method	X-RAY DIFFRACTION 2.12 Å
Organisms	Moraxella catarrhalis BBH18
Macromolecule	Enoyl-[acyl-carrier-protein] reductase [NADH] (protein)
Unique Ligands	CA, GOL, NAD

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7FC8	Download File View File

Crystal structure of the Apo enoyl-ACP-reductase (FabI) from Moraxella catarrhalis

Katiki, M., Pratap, S., Kumar, P.

(2022) Biochimie 198: 8-22

Released	2022-07-20
Method	X-RAY DIFFRACTION 2.377 Å
Organisms	Moraxella catarrhalis BBH18
Macromolecule	Enoyl-[acyl-carrier-protein] reductase [NADH] (protein)
Unique Ligands	CA

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7FCM	Download File View File

Crystal structure of Moraxella catarrhalis enoyl-ACP-reductase (FabI) in complex with NAD and Triclosan

Katiki, M., Neetu, N., Pratap, S., Kumar, P.

(2022) Biochimie 198: 8-22

Released	2022-07-20
Method	X-RAY DIFFRACTION 2.22 Å
Organisms	Moraxella catarrhalis BBH18
Macromolecule	Enoyl-[acyl-carrier-protein] reductase [NADH] (protein)
Unique Ligands	CA, NAD, TCL

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8FBZ	Download File View File

Crystal Structure of apo human Glutathione Synthetase Y270E

Stanford, S.M., Santelli, E., Sankaran, B., Murali, R., Bottini, N.

(2024) Sci Adv 10: eadg7887-eadg7887

Released	2024-05-08
Method	X-RAY DIFFRACTION 1.59 Å
Organisms	Homo sapiens
Macromolecule	Glutathione synthetase (protein)
Unique Ligands	GOL, SO4

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8FNX	Download File View File

Crystal structure of Hyaluronate lyase B from Cutibacterium acnes

Katiki, M., McNally, R., Chatterjee, A., Hajam, I.A., Liu, G.Y., Murali, R.

(2023) Nat Commun 14: 8061-8061

Released	2023-12-13
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Cutibacterium acnes HL110PA3
Macromolecule	Hyaluronate lyase (protein)
Unique Ligands	GOL, PO4

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8FYG	Download File View File

Crystal structure of Hyaluronate lyase A from Cutibacterium acnes

Katiki, M., McNally, R., Chatterjee, A., Hajam, I.A., Liu, G.Y., Murali, R.

(2023) Nat Commun 14: 8061-8061

Released	2023-12-13
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Cutibacterium acnes HL043PA1
Macromolecule	Hyaluronate lyase (protein)
Unique Ligands	EDO, GOL

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8G0O	Download File View File

Crystal structure of Y281F mutant of Hyaluronate lyase B from Cutibacterium acnes

Katiki, M., McNally, R., Chatterjee, A., Hajam, I.A., Liu, G.Y., Murali, R.

(2023) Nat Commun 14: 8061-8061

Released	2023-12-13
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Cutibacterium acnes HL110PA3
Macromolecule	Hyaluronate lyase (protein)

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8JFF	Download File View File

Crystal structure of Catabolite repressor acivator from E. coli in complex with HEPES

Neetu, N., Katiki, M., Kumar, P.

(2023) J Struct Biol 215: 108034-108034

Released	2024-04-24
Method	X-RAY DIFFRACTION 2.89 Å
Organisms	Escherichia coli 536
Macromolecule	Catabolite repressor/activator (protein)
Unique Ligands	EPE

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8JFV	Download File View File

Crystal structure of Catabolite repressor acivator from E. coli in complex with sulisobenzone

Neetu, N., Sharma, M., Mahto, J.K., Kumar, P.

(2023) J Struct Biol 215: 108034-108034

Released	2024-04-24
Method	X-RAY DIFFRACTION 3.05 Å
Organisms	Escherichia coli 536
Macromolecule	Catabolite repressor/activator (protein)
Unique Ligands	EDO, EPE, I4Y, PO4

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8T0F	Download File View File

Crystal structure of the PEG10 promoter-bound ONECUT2 DNA-binding domain

Chatterjee, A., Katiki, M., Murali, R.

(2024) Nat Commun 15: 9037-9037

Released	2024-08-28
Method	X-RAY DIFFRACTION 2.61 Å
Organisms	Homo sapiens
Macromolecule	One cut domain family member 2 (protein) DNA (5'-D(PAPGPAPTPCPGPAPTPTPTPGPC)-3') (nucleic acid) DNA (5'-D(PGPCPAPAPAPTPCPGPAPTPCPT)-3') (nucleic acid)

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8T11	Download File View File

Crystal structure of the PEG10 promoter-bound ONECUT2 R479A/R480A mutant DNA-binding domain

Chatterjee, A., Katiki, M., Murali, R.

(2024) Nat Commun 15: 9037-9037

Released	2024-08-28
Method	X-RAY DIFFRACTION 2.91 Å
Organisms	Homo sapiens
Macromolecule	One cut domain family member 2 (protein) DNA (5'-D(PAPGPAPTPCPGPAPTPTPTPGPC)-3') (nucleic acid) DNA (5'-D(PGPCPAPAPAPTPCPGPAPTPCPT)-3') (nucleic acid)