RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Lee, S."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 441 Structures.

Refinements

Structure Determination Methodology

experimental (441)

Scientific Name of Source Organism

	Homo sapiens (226)
	synthetic construct (32)
	Escherichia coli (30)
	Arabidopsis thaliana (16)
	Saccharomyces cerevisiae (12)
	Saccharomyces cerevisiae S288C (12)
	Oryza sativa (11)
	Severe acute respiratory syndrome coronavirus 2 (10)
	Sindbis virus (9)
	Salmonella enterica subsp. enterica serovar Typhi str. CT18 (8)

More...

Taxonomy

	Eukaryota (297)
	Bacteria (106)
	other sequences (32)
	Riboviria (25)
	Archaea (14)
	Eukaryota (eukaryotes) (9)
	Duplodnaviria (3)

Experimental Method

	X-RAY DIFFRACTION (345)
	ELECTRON MICROSCOPY (71)
	SOLUTION NMR (19)
	ELECTRON CRYSTALLOGRAPHY (6)

Polymer Entity Type

	Protein (439)
	DNA (113)
	RNA (6)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (12)
	1.5 - 2.0 (86)
	2.0 - 2.5 (143)
	2.5 - 3.0 (101)
	3.0 - 3.5 (47)
	3.5 - 4.0 (17)
	4.0 - 4.5 (5)
	> 4.5 (9)

Release Date

	1995 - 1999 (14)
	2000 - 2004 (13)
	2005 - 2009 (47)
	2010 - 2014 (80)
	2015 - 2019 (111)
	2020 - 2024 (158)
	2025 - 2029 (18)

Enzyme Classification Name

	Lyases (73)
	Transferases (130)
	Hydrolases (84)
	Oxidoreductases (10)
	Ligases (4)
	Isomerases (4)
	Translocases (4)

Membrane Protein Annotation

	PDBTM (52)
	OPM (14)
	MemProtMD (17)
	mpstruc (10)

Symmetry Type

	Asymmetric (273)
	Cyclic (148)
	Dihedral (33)
	Tetrahedral (5)
	Helical (2)
	Icosahedral (2)

SCOP Classification

	Alpha and beta proteins (a+b) (52)
	All alpha proteins (31)
	Artifacts (18)
	All beta proteins (28)
	Alpha and beta proteins (a/b) (13)
	Peptides (7)
	Multi-domain proteins (alpha and beta) (3)
	Small proteins (3)
	Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 25 of 441 Structures

Page 1 of 18

Sort by

Explore in 3D

1B66 \| pdb_00001b66	Download File View File

6-PYRUVOYL TETRAHYDROPTERIN SYNTHASE

Ploom, T., Thoeny, B., Yim, J., Lee, S., Nar, H., Leimbacher, W., Huber, R., Richardson, J., Auerbach, G.

(1999) J Mol Biology 286: 851-860

Released	1999-04-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rattus rattus
Macromolecule	6-PYRUVOYL TETRAHYDROPTERIN SYNTHASE (protein)
Unique Ligands	BIO, ZN

Explore in 3D

1B6Z \| pdb_00001b6z	Download File View File

6-PYRUVOYL TETRAHYDROPTERIN SYNTHASE

Ploom, T., Thoeny, B., Yim, J., Lee, S., Nar, H., Leimbacher, W., Huber, R., Richardson, J., Auerbach, G.

(1999) J Mol Biology 286: 851-860

Released	2000-01-21
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rattus norvegicus
Macromolecule	6-pyruvoyl tetrahydropterin synthase (protein)
Unique Ligands	ZN

Explore in 3D

1C3G \| pdb_00001c3g	Download File View File

S. CEREVISIAE HEAT SHOCK PROTEIN 40 SIS1

Sha, B., Lee, S., Cyr, D.

(2000) Structure 8: 799-807

Released	2000-08-03
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	HEAT SHOCK PROTEIN 40 (protein)

Explore in 3D

1C98 \| pdb_00001c98	Download File View File

SOLUTION STRUCTURE OF NEUROMEDIN B

Lee, S., Kim, Y.

(1999) FEBS Lett 460: 263-269

Released	1999-08-11
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	NEUROMEDIN B (protein)

Explore in 3D

1C9A \| pdb_00001c9a	Download File View File

SOLUTION STRUCTURE OF NEUROMEDIN B

Lee, S., Kim, Y.

(1999) FEBS Lett 460: 263-269

Released	1999-11-11
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	NEUROMEDIN B (protein)

Explore in 3D

1F0D \| pdb_00001f0d	Download File View File

Cecropin A(1-8)-magainin 2(1-12) in dodecylphosphocholine micelles

Oh, D., Shin, S.Y., Lee, S., Kim, Y.

(2000) Biochemistry 39: 11855-11864

Released	2000-06-14
Method	SOLUTION NMR
Organisms	Hyalophora cecropia Xenopus laevis
Macromolecule	CECROPIN A-MAGAININ 2 HYBRID PEPTIDE (protein)

Explore in 3D

1F0E \| pdb_00001f0e	Download File View File

Cecropin A(1-8)-magainin 2(1-12) modified gig to P in dodecylphosphocholine micelles

Oh, D., Shin, S.Y., Lee, S., Kim, Y.

(2000) Biochemistry 39: 11855-11864

Released	2000-06-14
Method	SOLUTION NMR
Organisms	Hyalophora cecropia Xenopus laevis
Macromolecule	CECROPIN A-MAGAININ 2 HYBRID PEPTIDE (protein)

Explore in 3D

1F0F \| pdb_00001f0f	Download File View File

Cecropin A(1-8)-magainin 2(1-12) gig deletion modification in dodecylphosphocholine micelles

Oh, D., Shin, S.Y., Lee, S., Kim, Y.

(2000) Biochemistry 39: 11855-11864

Released	2000-06-14
Method	SOLUTION NMR
Organisms	Hyalophora cecropia Xenopus laevis
Macromolecule	CECROPIN A-MAGAININ 2 HYBRID PEPTIDE (protein)

Explore in 3D

1F0G \| pdb_00001f0g	Download File View File

Cecropin A(1-8)-magainin 2(1-12) L2 in dodecylphosphocholine micelles

Oh, D., Shin, S.Y., Lee, S., Kim, Y.

(2000) Biochemistry 39: 11855-11864

Released	2000-06-14
Method	SOLUTION NMR
Organisms	Hyalophora cecropia Xenopus laevis
Macromolecule	CECROPIN A-MAGAININ 2 HYBRID PEPTIDE (protein)

Explore in 3D

1F0H \| pdb_00001f0h	Download File View File

Cecropin A(1-8)-magainin 2(1-12) A2 in dodecylphosphocholine micelles

Oh, D., Shin, S.Y., Lee, S., Kim, Y.

(2000) Biochemistry 39: 11855-11864

Released	2000-06-14
Method	SOLUTION NMR
Organisms	Hyalophora cecropia Xenopus laevis
Macromolecule	CECROPIN A-MAGAININ 2 HYBRID PEPTIDE (protein)

Explore in 3D

1IA5 \| pdb_00001ia5	Download File View File

POLYGALACTURONASE FROM ASPERGILLUS ACULEATUS

Cho, S.W., Lee, S., Shin, W.

(2001) J Mol Biology 311: 863-878

Released	2001-09-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Aspergillus aculeatus
Macromolecule	POLYGALACTURONASE (protein)
Unique Ligands	MAN
Unique branched monosaccharides	MAN, NAG

Explore in 3D

1IB4 \| pdb_00001ib4	Download File View File

Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5

Cho, S.W., Shin, W.

(2001) J Mol Biology 311: 863-878

Released	2001-09-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Aspergillus aculeatus
Macromolecule	POLYGALACTURONASE (protein)
Unique Ligands	CD, MAN
Unique branched monosaccharides	MAN, NAG

Explore in 3D

1KXA \| pdb_00001kxa	Download File View File

SINDBIS VIRUS CAPSID, (WILD-TYPE) RESIDUES 106-264, TETRAGONAL CRYSTAL FORM

Choi, H.-K., Rossmann, M.G.

(1996) J Mol Biology 262: 151-167

Released	1996-11-08
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Sindbis virus
Macromolecule	SINDBIS VIRUS CAPSID PROTEIN (protein)

Explore in 3D

1KXB \| pdb_00001kxb	Download File View File

SINDBIS VIRUS CAPSID (S215A MUTANT), TETRAGONAL CRYSTAL FORM

Choi, H.-K., Rossmann, M.G.

(1996) J Mol Biology 262: 151-167

Released	1996-11-08
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Sindbis virus
Macromolecule	SINDBIS VIRUS CAPSID PROTEIN (protein)

Explore in 3D

1KXC \| pdb_00001kxc	Download File View File

SINDBIS VIRUS CAPSID (N190K MUTANT), TETRAGONAL CRYSTAL FORM

Choi, H.-K., Rossmann, M.G.

(1996) J Mol Biology 262: 151-167

Released	1996-11-08
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Sindbis virus
Macromolecule	SINDBIS VIRUS CAPSID PROTEIN (protein)

Explore in 3D

1KXD \| pdb_00001kxd	Download File View File

SINDBIS VIRUS CAPSID (N222L MUTANT), TETRAGONAL CRYSTAL FORM

Choi, H.-K., Rossmann, M.G.

(1996) J Mol Biology 262: 151-167

Released	1996-11-08
Method	X-RAY DIFFRACTION 3 Å
Organisms	Sindbis virus
Macromolecule	SINDBIS VIRUS CAPSID PROTEIN (protein)

Explore in 3D

1KXE \| pdb_00001kxe	Download File View File

SINDBIS VIRUS CAPSID (Y180S, E183G DOUBLE MUTANT), TETRAGONAL CRYSTAL FORM

Choi, H.-K., Rossmann, M.G.

(1996) J Mol Biology 262: 151-167

Released	1996-11-08
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Sindbis virus
Macromolecule	SINDBIS VIRUS CAPSID PROTEIN (protein)

Explore in 3D

1KXF \| pdb_00001kxf	Download File View File

SINDBIS VIRUS CAPSID, (WILD-TYPE) RESIDUES 1-264, TETRAGONAL CRYSTAL FORM (FORM II)

Choi, H.-K., Rossmann, M.G.

(1996) J Mol Biology 262: 151-167

Released	1996-12-07
Method	X-RAY DIFFRACTION 2.38 Å
Organisms	Sindbis virus
Macromolecule	SINDBIS VIRUS CAPSID PROTEIN (protein)

Explore in 3D

1P7G \| pdb_00001p7g	Download File View File

Crystal structure of superoxide dismutase from Pyrobaculum aerophilum

Lee, S., Sawaya, M.R., Eisenberg, D.

(2003) Acta Crystallogr D Biol Crystallogr 59: 2191-2199

Released	2003-12-02
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Pyrobaculum aerophilum
Macromolecule	Superoxide dismutase (protein)
Unique Ligands	ACT, BME

Explore in 3D

1QVR \| pdb_00001qvr	Download File View File

Crystal Structure Analysis of ClpB

Lee, S., Sowa, M.E., Watanabe, Y., Sigler, P.B., Chiu, W., Yoshida, M., Tsai, F.T.F.

(2003) Cell 115: 229-240

Released	2003-10-21
Method	X-RAY DIFFRACTION 3 Å
Organisms	Thermus thermophilus
Macromolecule	ClpB protein (protein)
Unique Ligands	ANP, PT

Explore in 3D

1SVP \| pdb_00001svp	Download File View File

SINDBIS VIRUS CAPSID PROTEIN

Lee, S., Rossmann, M.G.

(1996) Structure 4: 531-541

Released	1996-08-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Sindbis virus
Macromolecule	SINDBIS VIRUS CAPSID PROTEIN (protein)

Explore in 3D

1UWH \| pdb_00001uwh	Download File View File

The complex of wild type B-RAF and BAY439006.

Barford, D., Roe, S.M., Wan, P.T.C., Cancer Genome Project

(2004) Cell 116: 855

Released	2004-03-19
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Homo sapiens
Macromolecule	B-RAF PROTO-ONCOGENE SERINE/THREONINE-PROTEIN KINASE (protein)
Unique Ligands	BAX, CL

Explore in 3D

1UWJ \| pdb_00001uwj	Download File View File

The complex of mutant V599E B-RAF and BAY439006.

Barford, D., Roe, S.M., Wan, P.T.C., Cancer Genome Project

(2004) Cell 116: 855

Released	2004-03-19
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Homo sapiens
Macromolecule	B-RAF PROTO-ONCOGENE SERINE/THREONINE-PROTEIN KINASE (protein)
Unique Ligands	BAX