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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Li, X."

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Search Summary

This query matches 1,908 Structures.

Refinements

Structure Determination Methodology

experimental (1,908)

Scientific Name of Source Organism

	Homo sapiens (765)
	synthetic construct (205)
	Mus musculus (122)
	Severe acute respiratory syndrome coronavirus 2 (98)
	Saccharomyces cerevisiae S288C (67)
	Arabidopsis thaliana (35)
	Escherichia coli (34)
	Escherichia coli K-12 (26)
	Mycobacterium tuberculosis H37Rv (26)
	Staphylococcus aureus (26)

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Taxonomy

	Eukaryota (1,162)
	Bacteria (473)
	Riboviria (249)
	other sequences (206)
	Duplodnaviria (27)
	Varidnaviria (21)
	unclassified sequences (20)
	Archaea (16)
	Eukaryota (eukaryotes) (4)
	Monodnaviria (4)

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Experimental Method

	X-RAY DIFFRACTION (1,231)
	ELECTRON MICROSCOPY (619)
	SOLUTION NMR (47)
	ELECTRON CRYSTALLOGRAPHY (10)
	NEUTRON DIFFRACTION (1)

Polymer Entity Type

	Protein (1,894)
	RNA (133)
	DNA (84)

Refinement Resolution (Å)

	0.5 - 1.0 (17)
	1.0 - 1.5 (84)
	1.5 - 2.0 (326)
	2.0 - 2.5 (414)
	2.5 - 3.0 (467)
	3.0 - 3.5 (350)
	3.5 - 4.0 (134)
	4.0 - 4.5 (41)
	> 4.5 (28)

Release Date

	1990 - 1994 (2)
	1995 - 1999 (5)
	2000 - 2004 (17)
	2005 - 2009 (111)
	2010 - 2014 (254)
	2015 - 2019 (426)
	2020 - 2024 (1,039)
	2025 - 2029 (54)

Enzyme Classification Name

	Hydrolases (433)
	Transferases (276)
	Oxidoreductases (90)
	Lyases (47)
	Isomerases (42)
	Translocases (24)
	Ligases (25)

Membrane Protein Annotation

	PDBTM (314)
	mpstruc (198)
	OPM (176)
	MemProtMD (200)

Symmetry Type

	Asymmetric (1,171)
	Cyclic (593)
	Dihedral (92)
	Icosahedral (41)
	Octahedral (21)
	Helical (12)
	Tetrahedral (2)

SCOP Classification

	Alpha and beta proteins (a+b) (173)
	All beta proteins (158)
	Alpha and beta proteins (a/b) (108)
	Artifacts (119)
	All alpha proteins (66)
	Coiled coil proteins (5)
	Small proteins (10)
	Membrane and cell surface proteins and peptides (15)
	Multi-domain proteins (alpha and beta) (7)
	Peptides (5)

AllSelected

1 to 25 of 1,908 Structures

Page 1 of 77

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118D \| pdb_0000118d	Download File View File

CRYSTAL AND MOLECULAR STRUCTURE OF D(GTGCGCAC): INVESTIGATION OF THE EFFECTS OF BASE SEQUENCE ON THE CONFORMATION OF OCTAMER DUPLEXES

Bingman, C.A., Li, X., Zon, G., Sundaralingam, M.

(1992) Biochemistry 31: 12803-12812

Released	1993-02-11
Method	X-RAY DIFFRACTION 1.64 Å
Macromolecule	DNA (5'-D(GPTPGPCPGPCPAPC)-3') (nucleic acid)

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1C9W \| pdb_00001c9w	Download File View File

CHO REDUCTASE WITH NADP+

Ye, Q., Li, X., Hyndman, D., Flynn, T.G., Jia, Z.

(2000) Proteins 38: 41-48

Released	2000-01-07
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Cricetulus griseus
Macromolecule	CHO REDUCTASE (protein)
Unique Ligands	NAP

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1CS3 \| pdb_00001cs3	Download File View File

STRUCTURE OF BTB/POZ TRANSCRIPTION REPRESSION DOMAIN FROM PROMELOCYTIC LEUKEMIA ZINC FINGER ONCOPROTEIN

Li, X., Rauscher III, F.J., Marmorstein, R.

(1999) Cancer Res 59: 5275-5282

Released	1999-08-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	ZINC FINGER PROTEIN PLZF (protein)
Unique Ligands	GOL, MG

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1E9K \| pdb_00001e9k	Download File View File

The structure of the RACK1 interaction sites located within the unique N-terminal region of the cAMP-specific phosphodiesterase, PDE4D5.

Bolger, G.B., Smith, K.J., McCahill, A., Hyde, E.I., Steele, M.R., Houslay, M.D.

(2007) Cell Signal 19: 2612-2624

Released	2001-10-18
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	cAMP-specific 3',5'-cyclic phosphodiesterase 4D (protein)

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1IAT \| pdb_00001iat	Download File View File

CRYSTAL STRUCTURE OF HUMAN PHOSPHOGLUCOSE ISOMERASE/NEUROLEUKIN/AUTOCRINE MOTILITY FACTOR/MATURATION FACTOR

Read, J.A., Pearce, J., Li, X., Muirhead, H., Chirgwin, J., Davies, C.

(2001) J Mol Biology 309: 447-463

Released	2001-05-30
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Homo sapiens
Macromolecule	PHOSPHOGLUCOSE ISOMERASE (protein)
Unique Ligands	BME, SO4

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1JDL \| pdb_00001jdl	Download File View File

Structure of cytochrome c2 from Rhodospirillum Centenum

Camara-Artigas, A., Williams, J.C., Allen, J.P.

(2001) Acta Crystallogr D Biol Crystallogr 57: 1498-1505

Released	2001-11-07
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Rhodospirillum centenum
Macromolecule	CYTOCHROME C2, ISO-2 (protein)
Unique Ligands	HEM

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1KDU \| pdb_00001kdu	Download File View File

SEQUENTIAL 1H NMR ASSIGNMENTS AND SECONDARY STRUCTURE OF THE KRINGLE DOMAIN FROM UROKINASE

Li, X., Bokman, A.M., Llinas, M., Smith, R.A.G., Dobson, C.M.

(1994) J Mol Biology 235: 1548-1559

Released	1993-10-31
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	PLASMINOGEN ACTIVATOR (protein)

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1NUH \| pdb_00001nuh	Download File View File

The crystal structure of human phosphoglucose isomerase complexed with 5-phosphoarabinonate

Davies, C.

(2003) Acta Crystallogr D Biol Crystallogr 59: 1111-1113

Released	2003-02-11
Method	X-RAY DIFFRACTION 2.51 Å
Organisms	Homo sapiens
Macromolecule	glucose phosphate isomerase (protein)
Unique Ligands	PA5, SO4

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1P5J \| pdb_00001p5j	Download File View File

Crystal Structure Analysis of Human Serine Dehydratase

Sun, L., Liu, Y., Rao, Z.

(2003) Acta Crystallogr D Biol Crystallogr 59: 2297-2299

Released	2004-06-01
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	L-serine dehydratase (protein)
Unique Ligands	PLP

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1PYN \| pdb_00001pyn	Download File View File

DUAL-SITE POTENT, SELECTIVE PROTEIN TYROSINE PHOSPHATASE 1B INHIBITOR USING A LINKED FRAGMENT STRATEGY AND A MALONATE HEAD ON THE FIRST SITE

Szczepankiewicz, B.G., Liu, G., Hajduk, P.J., Abad-Zapatero, C., Zhonghua, P., Lubben, T., Trevillyan, J.M., Stashko, M., Ballaron, S.J., Liang, H.

(2003) Bioorg Med Chem Lett 13: 3129-3132

Released	2003-09-16
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Protein-tyrosine phosphatase, non-receptor type 1 (protein)
Unique Ligands	941

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1Q1M \| pdb_00001q1m	Download File View File

A Highly Efficient Approach to a Selective and Cell Active PTP1B inhibitors

Liu, G., Xin, Z., Pei, Z., Hajduk, P.J., Abad-Zapatero, C., Hutchins, C.W., Zhao, H., Lubben, T.H., Ballaron, S.J., Haasch, D.L., Kaszubska, W., Rondinone, C.M., Trevillyan, J.M., Jirousek, M.R.

(2003) J Med Chem 46: 4232-4235

Released	2003-09-16
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Protein-tyrosine phosphatase, non-receptor type 1 (protein)
Unique Ligands	234

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1QSN \| pdb_00001qsn	Download File View File

CRYSTAL STRUCTURE OF TETRAHYMENA GCN5 WITH BOUND COENZYME A AND HISTONE H3 PEPTIDE

Rojas, J.R., Trievel, R.C., Zhou, J., Mo, Y., Li, X., Berger, S.L., David Allis, C., Marmorstein, R.

(1999) Nature 401: 93-98

Released	1999-09-08
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Saccharomyces cerevisiae Tetrahymena thermophila
Macromolecule	HISTONE H3 (protein) TGCN5 HISTONE ACETYL TRANSFERASE (protein)
Unique Ligands	COA

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1QSR \| pdb_00001qsr	Download File View File

CRYSTAL STRUCTURE OF TETRAHYMENA GCN5 WITH BOUND ACETYL-COENZYME A

Rojas, J.R., Trievel, R.C., Zhou, J., Mo, Y., Li, X., Berger, S.L., David Allis, C., Marmorstein, R.

(1999) Nature 401: 93-98

Released	1999-09-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Tetrahymena thermophila
Macromolecule	TGCN5 HISTONE ACETYL TRANSFERASE (protein)
Unique Ligands	ACO

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1QST \| pdb_00001qst	Download File View File

CRYSTAL STRUCTURE OF TETRAHYMENA GCN5

Rojas, J.R., Trievel, R.C., Zhou, J., Mo, Y., Li, X., Berger, S.L., David Allis, C., Marmorstein, R.

(1999) Nature 401: 93-98

Released	1999-09-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Tetrahymena thermophila
Macromolecule	TGCN5 HISTONE ACETYL TRANSFERASE (protein)
Unique Ligands	EPE

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1QXK \| pdb_00001qxk	Download File View File

Monoacid-Based, Cell Permeable, Selective Inhibitors of Protein Tyrosine Phosphatase 1B

Xin, Z., Liu, G., Abad-Zapatero, C., Pei, Z., Szczepankiewick, B.G., Li, X., Zhang, T., Hutchins, C.W., Hajduk, P.J., Ballaron, S.J., Stashko, M.A., Lubben, T.H., Trevillyan, J.M., Jirousek, M.R.

(2003) Bioorg Med Chem Lett 13: 3947-3950

Released	2003-10-28
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Protein-tyrosine phosphatase, non-receptor type 1 (protein)
Unique Ligands	429