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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Lyons, J."

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Search Summary

This query matches 8 Structures.

Refinements

Structure Determination Methodology

experimental (8)

Scientific Name of Source Organism

	Halalkalibacterium halodurans (6)
	Brevibacillus brevis (2)

Taxonomy

Bacteria (8)

Experimental Method

X-RAY DIFFRACTION (8)

Polymer Entity Type

Protein (8)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	2.0 - 2.5 (4)
	2.5 - 3.0 (1)
	3.0 - 3.5 (1)

Release Date

	2010 - 2014 (2)
	2020 - 2024 (6)

Membrane Protein Annotation

	MemProtMD (6)
	PDBTM (6)

Symmetry Type

	Asymmetric (6)
	Cyclic (2)

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1 to 8 of 8 Structures

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2Y5M \| pdb_00002y5m	Download File View File

STRUCTURE OF LINEAR GRAMICIDIN D OBTAINED USING TYPE I CRYSTALS GROWN IN A 7.7 MONOACYLGLYCEROL LIPID CUBIC PHASE.

Hoefer, N., Aragao, D., Caffrey, M.

(2011) Cryst Growth Des 11: 1182

Released	2011-05-11
Method	X-RAY DIFFRACTION 1.08 Å
Organisms	Brevibacillus brevis
Macromolecule	VAL-GRAMICIDIN A (protein)
Unique Ligands	15P

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2Y6N \| pdb_00002y6n	Download File View File

STRUCTURE OF LINEAR GRAMICIDIN D OBTAINED USING TYPE I CRYSTALS GROWN IN A 8.8 MONOACYLGLYCEROL LIPID CUBIC PHASE.

Hoefer, N., Aragao, D., Caffrey, M.

(2011) Cryst Growth Des 11: 1182

Released	2011-05-11
Method	X-RAY DIFFRACTION 1.26 Å
Organisms	Brevibacillus brevis
Macromolecule	VAL-GRAMICIDIN A (protein)
Unique Ligands	15P, P4C

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6YU2 \| pdb_00006yu2	Download File View File

Crystal structure of MhsT in complex with L-isoleucine

Focht, D., Neumann, C., Lyons, J., Eguskiza Bilbao, A., Blunck, R., Malinauskaite, L., Schwarz, I.O., Javitch, J.A., Quick, M., Nissen, P.

(2021) EMBO J 40: e105164-e105164

Released	2020-07-15
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Halalkalibacterium halodurans
Macromolecule	Sodium-dependent transporter (protein)
Unique Ligands	BOG, ILE, NA

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6YU3 \| pdb_00006yu3	Download File View File

Crystal structure of MhsT in complex with L-phenylalanine

Focht, D., Neumann, C., Lyons, J., Eguskiza Bilbao, A., Blunck, R., Malinauskaite, L., Schwarz, I.O., Javitch, J.A., Quick, M., Nissen, P.

(2021) EMBO J 40: e105164-e105164

Released	2020-07-15
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Halalkalibacterium halodurans
Macromolecule	Sodium-dependent transporter (protein)
Unique Ligands	GOL, LMT, NA, PHE, SOG

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6YU4 \| pdb_00006yu4	Download File View File

Crystal structure of MhsT in complex with L-4F-phenylalanine

Focht, D., Neumann, C., Lyons, J., Eguskiza Bilbao, A., Blunck, R., Malinauskaite, L., Schwarz, I.O., Javitch, J.A., Quick, M., Nissen, P.

(2021) EMBO J 40: e105164-e105164

Released	2020-07-15
Method	X-RAY DIFFRACTION 2.26 Å
Organisms	Halalkalibacterium halodurans
Macromolecule	Sodium-dependent transporter (protein)
Unique Ligands	LMT, NA, PCW, PFF, SOG

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6YU5 \| pdb_00006yu5	Download File View File

Crystal structure of MhsT in complex with L-valine

Focht, D., Neumann, C., Lyons, J., Eguskiza Bilbao, A., Blunck, R., Malinauskaite, L., Schwarz, I.O., Javitch, J.A., Quick, M., Nissen, P.

(2021) EMBO J 40: e105164-e105164

Released	2020-07-15
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Halalkalibacterium halodurans
Macromolecule	Sodium-dependent transporter (protein)
Unique Ligands	BNG, LMT, NA, VAL

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6YU6 \| pdb_00006yu6	Download File View File

Crystal structure of MhsT in complex with L-leucine

Focht, D., Neumann, C., Lyons, J., Eguskiza Bilbao, A., Blunck, R., Malinauskaite, L., Schwarz, I.O., Javitch, J.A., Quick, M., Nissen, P.

(2021) EMBO J 40: e105164-e105164

Released	2020-07-15
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Halalkalibacterium halodurans
Macromolecule	Sodium-dependent transporter (protein)
Unique Ligands	LEU, LMT, NA, SOG

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6YU7 \| pdb_00006yu7	Download File View File

Crystal structure of MhsT in complex with L-tyrosine

Focht, D., Neumann, C., Lyons, J., Eguskiza Bilbao, A., Blunck, R., Malinauskaite, L., Schwarz, I.O., Javitch, J.A., Quick, M., Nissen, P.

(2021) EMBO J 40: e105164-e105164

Released	2020-07-15
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Halalkalibacterium halodurans
Macromolecule	Sodium-dependent transporter (protein)
Unique Ligands	BNG, LMT, NA, TYR

1 to 8 of 8 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2Y5M | pdb_00002y5m

STRUCTURE OF LINEAR GRAMICIDIN D OBTAINED USING TYPE I CRYSTALS GROWN IN A 7.7 MONOACYLGLYCEROL LIPID CUBIC PHASE.

2Y6N | pdb_00002y6n

STRUCTURE OF LINEAR GRAMICIDIN D OBTAINED USING TYPE I CRYSTALS GROWN IN A 8.8 MONOACYLGLYCEROL LIPID CUBIC PHASE.

6YU2 | pdb_00006yu2

Crystal structure of MhsT in complex with L-isoleucine

6YU3 | pdb_00006yu3

Crystal structure of MhsT in complex with L-phenylalanine

6YU4 | pdb_00006yu4

Crystal structure of MhsT in complex with L-4F-phenylalanine

6YU5 | pdb_00006yu5

Crystal structure of MhsT in complex with L-valine

6YU6 | pdb_00006yu6

Crystal structure of MhsT in complex with L-leucine

6YU7 | pdb_00006yu7

Crystal structure of MhsT in complex with L-tyrosine

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

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2Y5M | pdb_00002y5m

2Y6N | pdb_00002y6n

6YU2 | pdb_00006yu2

6YU3 | pdb_00006yu3

6YU4 | pdb_00006yu4

6YU5 | pdb_00006yu5

6YU6 | pdb_00006yu6

6YU7 | pdb_00006yu7