RCSB PDB: Search

2XAF \| pdb_00002xaf	Download File View File

Crystal structure of LSD1-CoREST in complex with para-bromo-(+)-cis-2- phenylcyclopropyl-1-amine

Binda, C., Valente, S., Romanenghi, M., Pilotto, S., Cirilli, R., Karytinos, A., Ciossani, G., Botrugno, O.A., Forneris, F., Tardugno, M., Edmondson, D.E., Minucci, S., Mattevi, A., Mai, A.

(2010) J Am Chem Soc 132: 6827

Released	2010-05-05
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD, TCF

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2XAG \| pdb_00002xag	Download File View File

Crystal structure of LSD1-CoREST in complex with para-bromo-(-)-trans- 2-phenylcyclopropyl-1-amine

Binda, C., Valente, S., Romanenghi, M., Pilotto, S., Cirilli, R., Karytinos, A., Ciossani, G., Botrugno, O.A., Forneris, F., Tardugno, M., Edmondson, D.E., Minucci, S., Mattevi, A., Mai, A.

(2010) J Am Chem Soc 132: 6827

Released	2010-05-05
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD, TCF

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2XAH \| pdb_00002xah	Download File View File

Crystal structure of LSD1-CoREST in complex with (+)-trans-2- phenylcyclopropyl-1-amine

Binda, C., Valente, S., Romanenghi, M., Pilotto, S., Cirilli, R., Karytinos, A., Ciossani, G., Botrugno, O.A., Forneris, F., Tardugno, M., Edmondson, D.E., Minucci, S., Mattevi, A., Mai, A.

(2010) J Am Chem Soc 132: 6827

Released	2010-05-05
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	3PL, FAD

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2XAJ \| pdb_00002xaj	Download File View File

Crystal structure of LSD1-CoREST in complex with (-)-trans-2- phenylcyclopropyl-1-amine

Binda, C., Valente, S., Romanenghi, M., Pilotto, S., Cirilli, R., Karytinos, A., Ciossani, G., Botrugno, O.A., Forneris, F., Tardugno, M., Edmondson, D.E., Minucci, S., Mattevi, A., Mai, A.

(2010) J Am Chem Soc 132: 6827

Released	2010-05-05
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD, TCA

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2XAQ \| pdb_00002xaq	Download File View File

Crystal structure of LSD1-CoREST in complex with a tranylcypromine derivative (MC2584, 13b)

Binda, C., Valente, S., Romanenghi, M., Pilotto, S., Cirilli, R., Karytinos, A., Ciossani, G., Botrugno, O.A., Forneris, F., Tardugno, M., Edmondson, D.E., Minucci, S., Mattevi, A., Mai, A.

(2010) J Am Chem Soc 132: 6827

Released	2010-05-05
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD, M84

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2XAS \| pdb_00002xas	Download File View File

Crystal structure of LSD1-CoREST in complex with a tranylcypromine derivative (MC2580, 14e)

Binda, C., Valente, S., Romanenghi, M., Pilotto, S., Cirilli, R., Karytinos, A., Ciossani, G., Botrugno, O.A., Forneris, F., Tardugno, M., Edmondson, D.E., Minucci, S., Mattevi, A., Mai, A.

(2010) J Am Chem Soc 132: 6827

Released	2010-05-05
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD, M80

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3U78 \| pdb_00003u78	Download File View File

E67-2 selectively inhibits KIAA1718, a human histone H3 lysine 9 Jumonji demethylase

Upadhyay, A.K., Cheng, X.

(2012) J Mol Biology 416: 319-327

Released	2012-01-25
Method	X-RAY DIFFRACTION 2.689 Å
Organisms	Homo sapiens
Macromolecule	Lysine-specific demethylase 7 (protein)
Unique Ligands	AKG, CL, E67, EDO, NI, SO4

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3ZMS \| pdb_00003zms	Download File View File

LSD1-CoREST in complex with INSM1 peptide

Tortorici, M., Borrello, M.T., Tardugno, M., Chiarelli, L.R., Pilotto, S., Ciossani, G., Vellore, N.A., Cowan, J., O'Connell, M., Mai, A., Baron, R., Ganesan, A., Mattevi, A.

(2013) ACS Chem Biol 8: 1677

Released	2013-06-12
Method	X-RAY DIFFRACTION 2.96 Å
Organisms	Homo sapiens
Macromolecule	INSULINOMA-ASSOCIATED PROTEIN 1 (protein) LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD

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3ZMT \| pdb_00003zmt	Download File View File

LSD1-CoREST in complex with PRSFLV peptide

Tortorici, M., Borrello, M.T., Tardugno, M., Chiarelli, L.R., Pilotto, S., Ciossani, G., Vellore, N.A., Cowan, J., O'Connell, M., Mai, A., Baron, R., Ganesan, A., Mattevi, A.

(2013) ACS Chem Biol 8: 1677

Released	2013-06-12
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) PEPTIDE (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD

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3ZMU \| pdb_00003zmu	Download File View File

LSD1-CoREST in complex with PKSFLV peptide

Tortorici, M., Borrello, M.T., Tardugno, M., Chiarelli, L.R., Pilotto, S., Ciossani, G., Vellore, N.A., Cowan, J., O'Connell, M., Mai, A., Baron, R., Ganesan, A., Mattevi, A.

(2013) ACS Chem Biol 8: 1677-1682

Released	2013-06-12
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) PKSFLV PEPTIDE (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD

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3ZMV \| pdb_00003zmv	Download File View File

LSD1-CoREST in complex with PLSFLV peptide

Tortorici, M., Borrello, M.T., Tardugno, M., Chiarelli, L.R., Pilotto, S., Ciossani, G., Vellore, N.A., Cowan, J., O'Connell, M., Mai, A., Baron, R., Ganesan, A., Mattevi, A.

(2013) ACS Chem Biol 8: 1677-1682

Released	2013-06-12
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) PKSFLV PEPTIDE (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD

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3ZMZ \| pdb_00003zmz	Download File View File

LSD1-CoREST in complex with PRSFAV peptide

Tortorici, M., Borrello, M.T., Tardugno, M., Chiarelli, L.R., Pilotto, S., Ciossani, G., Vellore, N.A., Cowan, J., O'Connell, M., Mai, A., Baron, R., Ganesan, A., Mattevi, A.

(2013) ACS Chem Biol 8: 1677

Released	2013-06-12
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) PEPTIDE (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD

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3ZN0 \| pdb_00003zn0	Download File View File

LSD1-CoREST in complex with PRSFAA peptide

Tortorici, M., Borrello, M.T., Tardugno, M., Chiarelli, L.R., Pilotto, S., Ciossani, G., Vellore, N.A., Cowan, J., O'Connell, M., Mai, A., Baron, R., Ganesan, A., Mattevi, A.

(2013) ACS Chem Biol 8: 1677

Released	2013-06-12
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) PEPTIDE (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD

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3ZN1 \| pdb_00003zn1	Download File View File

LSD1-CoREST in complex with PRLYLV peptide

Tortorici, M., Borrello, M.T., Tardugno, M., Chiarelli, L.R., Pilotto, S., Ciossani, G., Vellore, N.A., Cowan, J., O'Connell, M., Mai, A., Baron, R., Ganesan, A., Mattevi, A.

(2013) ACS Chem Biol 8: 1677-1682

Released	2013-06-12
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) PEPTIDE (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD

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4UV8 \| pdb_00004uv8	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Benzyl-Tranylcypromine

Vianello, P., Botrugno, O., Cappa, A., Ciossani, G., Dessanti, P., Mai, A., Mattevi, A., Meroni, G., Minucci, S., Thaler, F., Tortorici, M., Trifiro, P., Valente, S., Villa, M., Varasi, M., Mercurio, C.

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D69

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4UV9 \| pdb_00004uv9	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Ethyl-Tranylcypromine

Vianello, P., Botrugno, O., Cappa, A., Ciossani, G., Dessanti, P., Mai, A., Mattevi, A., Meroni, G., Minucci, S., Thaler, F., Tortorici, M., Trifiro, P., Valente, S., Villa, M., Varasi, M., Mercurio, C.

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D70

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4UVA \| pdb_00004uva	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Methyl-Tranylcypromine (1R,2S)

Vianello, P., Botrugno, O., Cappa, A., Ciossani, G., Dessanti, P., Mai, A., Mattevi, A., Meroni, G., Minucci, S., Thaler, F., Tortorici, M., Trifiro, P., Valente, S., Villa, M., Varasi, M., Mercurio, C.

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D73

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4UVB \| pdb_00004uvb	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Methyl-Tranylcypromine (1S,2R)

Vianello, P., Botrugno, O., Cappa, A., Ciossani, G., Dessanti, P., Mai, A., Mattevi, A., Meroni, G., Minucci, S., Thaler, F., Tortorici, M., Trifiro, P., Valente, S., Villa, M., Varasi, M., Mercurio, C.

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D51

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4UVC \| pdb_00004uvc	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Phenyl-Tranylcypromine

Vianello, P., Botrugno, O., Cappa, A., Ciossani, G., Dessanti, P., Mai, A., Mattevi, A., Meroni, G., Minucci, S., Thaler, F., Tortorici, M., Trifiro, P., Valente, S., Villa, M., Varasi, M., Mercurio, C.

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D52

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4UXN \| pdb_00004uxn	Download File View File

LSD1(KDM1A)-CoREST in complex with Z-Pro derivative of MC2580

Rodriguez, V., Valente, S., Stazi, G., Lucidi, A., Mercurio, C., Vianello, P., Ciossani, G., Mattevi, A., Botrugno, O.A., Dessanti, P., Minucci, S., Varasi, M., Mai, A.

(2015) ChemMedChem 6: 665-670

Released	2015-02-25
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD, M8A

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5ADZ \| pdb_00005adz	Download File View File

Ether Lipid-Generating Enzyme AGPS in complex with inhibitor 1a

Piano, V., Benjamin, D.I., Valente, S., Nenci, S., Marrocco, B., Mai, A., Aliverti, A., Nomura, D.K., Mattevi, A.

(2015) ACS Chem Biol 10: 2589

Released	2015-09-23
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Cavia porcellus
Macromolecule	ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE, PEROXISOMAL (protein)
Unique Ligands	FAD, KQS

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5AE1 \| pdb_00005ae1	Download File View File

Ether Lipid-Generating Enzyme AGPS in complex with inhibitor ZINC69435460

Piano, V., Benjamin, D.I., Valente, S., Nenci, S., Marrocco, B., Mai, A., Aliverti, A., Nomura, D.K., Mattevi, A.

(2015) ACS Chem Biol 10: 2589

Released	2015-09-09
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Cavia porcellus
Macromolecule	ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE, PEROXISOMAL (protein)
Unique Ligands	B2Z, FAD, SO4

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5AE2 \| pdb_00005ae2	Download File View File

Ether Lipid-Generating Enzyme AGPS in complex with inhibitor 1e

Piano, V., Benjamin, D.I., Valente, S., Nenci, S., Marrocco, B., Mai, A., Aliverti, A., Nomura, D.K., Mattevi, A.

(2015) ACS Chem Biol 10: 2589-2597

Released	2015-09-09
Method	X-RAY DIFFRACTION 2 Å
Organisms	Cavia porcellus
Macromolecule	ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE, PEROXISOMAL (protein)
Unique Ligands	FAD, FYC, SO4

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5AE3 \| pdb_00005ae3	Download File View File

Ether Lipid-Generating Enzyme AGPS in complex with antimycin A

Piano, V., Benjamin, D.I., Valente, S., Nenci, S., Marrocco, B., Mai, A., Aliverti, A., Nomura, D.K., Mattevi, A.

(2015) ACS Chem Biol 10: 2589

Released	2015-09-09
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Cavia porcellus
Macromolecule	ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE, PEROXISOMAL (protein)
Unique Ligands	AWB, FAD, SO4

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5FZE \| pdb_00005fze	Download File View File

Crystal structure of the catalytic domain of human JARID1B in complex with MC3960

Nowak, R., Krojer, T., Johansson, C., Gileadi, C., Kupinska, K., Strain-Damerell, C., Szykowska, A., von Delft, F., Burgess-Brown, N.A., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Rotili, D., Mai, A., Oppermann, U.

To be published

Released	2017-03-29
Method	X-RAY DIFFRACTION 2.02 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC DEMETHYLASE 5B (protein)
Unique Ligands	CL, DMS, EDO, H0X, MN, PO4, ZN

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2XAF | pdb_00002xaf

2XAG | pdb_00002xag

2XAH | pdb_00002xah

2XAJ | pdb_00002xaj

2XAQ | pdb_00002xaq

2XAS | pdb_00002xas

3U78 | pdb_00003u78

3ZMS | pdb_00003zms

3ZMT | pdb_00003zmt

3ZMU | pdb_00003zmu

3ZMV | pdb_00003zmv

3ZMZ | pdb_00003zmz

3ZN0 | pdb_00003zn0

3ZN1 | pdb_00003zn1

4UV8 | pdb_00004uv8

4UV9 | pdb_00004uv9

4UVA | pdb_00004uva

4UVB | pdb_00004uvb

4UVC | pdb_00004uvc

4UXN | pdb_00004uxn

5ADZ | pdb_00005adz

5AE1 | pdb_00005ae1

5AE2 | pdb_00005ae2

5AE3 | pdb_00005ae3

5FZE | pdb_00005fze