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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Naylor, C.E."

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Search Summary

This query matches 90 Structures.

Refinements

Structure Determination Methodology

experimental (90)

Scientific Name of Source Organism

	Homo sapiens (75)
	synthetic construct (6)
	uncultured actinomycete (4)
	Ecballium elaterium (3)
	Viscum album (3)
	Sus scrofa (2)
	Aequorea victoria (1)
	Arabidopsis thaliana (1)
	Phaseolus lunatus (1)
	Physarum polycephalum (1)

More...

Taxonomy

	Eukaryota (85)
	other sequences (6)
	Bacteria (4)
	Archaea (1)
	Eukaryota (eukaryotes) (1)
	unclassified sequences (1)

Experimental Method

	X-RAY DIFFRACTION (84)
	ELECTRON MICROSCOPY (6)

Polymer Entity Type

Protein (90)

Refinement Resolution (Å)

	1.0 - 1.5 (8)
	1.5 - 2.0 (26)
	2.0 - 2.5 (32)
	2.5 - 3.0 (17)
	3.0 - 3.5 (7)

Release Date

	2000 - 2004 (4)
	2005 - 2009 (53)
	2010 - 2014 (5)
	2015 - 2019 (17)
	2020 - 2024 (10)
	2025 - 2029 (1)

Enzyme Classification Name

	Transferases (51)
	Hydrolases (19)
	Oxidoreductases (4)
	Translocases (1)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Asymmetric (68)
	Cyclic (17)
	Dihedral (5)

SCOP Classification

	Alpha and beta proteins (a+b) (43)
	Alpha and beta proteins (a/b) (13)
	Small proteins (7)
	Artifacts (13)
	All alpha proteins (8)
	All beta proteins (3)

AllSelected

1 to 25 of 90 Structures

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1H34 \| pdb_00001h34	Download File View File

Crystal structure of lima bean trypsin inhibitor

Debreczeni, J.E., Bunkoczi, G., Girmann, B., Sheldrick, G.M.

(2003) Acta Crystallogr D Biol Crystallogr 59: 393

Released	2003-02-06
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Phaseolus lunatus
Macromolecule	BOWMAN-BIRK TYPE PROTEINASE INHIBITOR (protein)

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1H9H \| pdb_00001h9h	Download File View File

COMPLEX OF EETI-II WITH PORCINE TRYPSIN

Kraetzner, R., Wentzel, A., Kolmar, H., Uson, I.

(2005) Acta Crystallogr D Biol Crystallogr 61: 1255

Released	2004-07-26
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Ecballium elaterium Sus scrofa
Macromolecule	TRYPSIN (protein) TRYPSIN INHIBITOR II (protein)
Unique Ligands	CA

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1H9I \| pdb_00001h9i	Download File View File

COMPLEX OF EETI-II MUTANT WITH PORCINE TRYPSIN

Kraetzner, R., Wentzel, A., Kolmar, H., Uson, I.

(2005) Acta Crystallogr D Biol Crystallogr 61: 1255

Released	2004-07-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Ecballium elaterium Sus scrofa
Macromolecule	TRYPSIN (protein) TRYPSIN INHIBITOR II (protein)
Unique Ligands	CA

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1HH3 \| pdb_00001hh3	Download File View File

Decaplanin first P21-Form

Lehmann, C., Vertessy, L., Sheldrick, G.M., Dauter, Z., Dauter, M.

(2003) Helvetica Chim Acta 86: 1478

Released	2005-07-11
Method	X-RAY DIFFRACTION 1 Å
Organisms	uncultured actinomycete
Macromolecule	DECAPLANIN (protein)
Unique Ligands	ERE, GOL
Unique branched monosaccharides	BGC, RAM

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1HHA \| pdb_00001hha	Download File View File

Decaplanin first P6122-Form

Lehmann, C., Vertessy, L., Sheldrick, G.M., Dauter, Z., Dauter, M.

(2003) Helvetica Chim Acta 86: 1478

Released	2005-07-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	uncultured actinomycete
Macromolecule	DECAPLANIN (protein)
Unique Ligands	ERE, GOL
Unique branched monosaccharides	BGC, RAM

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1HHC \| pdb_00001hhc	Download File View File

Crystal structure of Decaplanin - space group P21, second form

Lehmann, C., Vertessy, L., Sheldrick, G.M., Dauter, Z., Dauter, M.

(2003) Helvetica Chim Acta 86: 1478

Released	2005-07-11
Method	X-RAY DIFFRACTION 1.13 Å
Organisms	uncultured actinomycete
Macromolecule	DECAPLANIN (protein)
Unique Ligands	CIT, ERE
Unique branched monosaccharides	BGC, RAM

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1HHF \| pdb_00001hhf	Download File View File

Decaplanin second P6122-Form

Lehmann, C., Vertessy, L., Sheldrick, G.M., Dauter, Z., Dauter, M.

(2003) Helvetica Chim Acta 86: 1478

Released	2005-07-11
Method	X-RAY DIFFRACTION 1.47 Å
Organisms	uncultured actinomycete
Macromolecule	DECAPLANIN (protein)
Unique Ligands	CL, ERE, PO4
Unique branched monosaccharides	BGC, RAM

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1OKH \| pdb_00001okh	Download File View File

Viscotoxin A3 from Viscum album L.

Debreczeni, J.E., Girmann, B., Zeeck, A., Sheldrick, G.M.

(2003) Acta Crystallogr D Biol Crystallogr 59: 2125

Released	2003-12-04
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Viscum album
Macromolecule	VISCOTOXIN A3 (protein)
Unique Ligands	PO4, SO4

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1W7Z \| pdb_00001w7z	Download File View File

Crystal structure of the free (uncomplexed) Ecballium elaterium trypsin inhibitor (EETI-II)

Kraetzner, R., Debreczeni, J.E., Pape, T., Kolmar, H., Schneider, T.R., Uson, I., Scheldrick, G.M.

(2005) Acta Crystallogr D Biol Crystallogr 61: 1255

Released	2005-11-01
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Ecballium elaterium
Macromolecule	TRYPSIN INHIBITOR II (protein)
Unique Ligands	FMT, NA

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1Z57 \| pdb_00001z57	Download File View File

Crystal structure of human CLK1 in complex with 10Z-Hymenialdisine

Debreczeni, J., Das, S., Knapp, S., Bullock, A., Guo, K., Amos, A., Fedorov, O., Edwards, A., Sundstrom, M., von Delft, F., Niesen, F.H., Ball, L., Sobott, F., Arrowsmith, C., Structural Genomics Consortium (SGC)

(2009) Structure 17: 352-362

Released	2005-04-12
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Dual specificity protein kinase CLK1 (protein)
Unique Ligands	DBQ

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2A3K \| pdb_00002a3k	Download File View File

Crystal Structure of the Human Protein Tyrosine Phosphatase, PTPN7 (HePTP, Hematopoietic Protein Tyrosine Phosphatase)

Barr, A., Turnbull, A.P., Das, S., Eswaran, J., Debreczeni, J.E., Longmann, E., Smee, C., Burgess, N., Gileadi, O., Sundstrom, M., Arrowsmith, C., Edwards, A., von Delft, F., Knapp, S., Structural Genomics Consortium (SGC)

(2006) Protein Sci 15: 1500-1505

Released	2005-07-19
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Homo sapiens
Macromolecule	protein tyrosine phosphatase, non-receptor type 7, isoform 1 (protein)
Unique Ligands	PO4

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2A8B \| pdb_00002a8b	Download File View File

Crystal Structure of the Catalytic Domain of Human Tyrosine Phosphatase Receptor, Type R

Ugochukwu, E., Eswaran, J., Barr, A., Longman, E., Arrowsmith, C., Edwards, A., Sundstrom, M., von Delft, F., Knapp, S., Structural Genomics Consortium (SGC)

(2006) Biochem J 395: 483-491

Released	2005-07-19
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Receptor-type tyrosine-protein phosphatase R (protein)
Unique Ligands	CL

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2BIJ \| pdb_00002bij	Download File View File

Crystal structure of the human protein tyrosine phosphatase PTPN5 (STEP, striatum enriched enriched Phosphatase)

Barr, A.J., Debreczeni, J.E., Eswaran, J., Smee, C., Burgess, N., Gileadi, O., Sundstrom, M., Arrowsmith, C., Edwards, A., Knapp, S., von Delft, F.

(2006) Biochem J 395: 483-491

Released	2005-03-17
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	TYROSINE-PROTEIN PHOSPHATASE, NON-RECEPTOR TYPE 5 (protein)
Unique Ligands	SO4

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2BL0 \| pdb_00002bl0	Download File View File

Physarum polycephalum myosin II regulatory domain

Debreczeni, J.E., Farkas, L., Harmat, V., Nyitray, L.

(2005) J Biological Chem 280: 41458

Released	2005-10-13
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Physarum polycephalum
Macromolecule	MAJOR PLASMODIAL MYOSIN HEAVY CHAIN (protein) MYOSIN REGULATORY LIGHT CHAIN (protein)
Unique Ligands	CA

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2BP1 \| pdb_00002bp1	Download File View File

Structure of the aflatoxin aldehyde reductase in complex with NADPH

Debreczeni, J.E., Lukacik, P., Kavanagh, K., Dubinina, E., Bray, J., Colebrook, S., Haroniti, A., Edwards, A., Arrowsmith, C., Sundstrom, M., von Delft, F., Gileadi, O., Oppermann, U.

To be published

Released	2005-05-11
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	AFLATOXIN B1 ALDEHYDE REDUCTASE MEMBER 2 (protein)
Unique Ligands	FLC, NDP

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2BUJ \| pdb_00002buj	Download File View File

Crystal structure of the human Serine-threonine Kinase 16 in complex with staurosporine

Debreczeni, J.E., Eswaran, J., Bullock, A., Filippakopoulos, P., Kavanagh, K., Amos, A., Fedorov, O., Sobott, F., Ball, L.J., von Delft, F., Arrowsmith, C., Sundstrom, M., Edwards, A., Knapp, S.

To be published

Released	2005-07-05
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	SERINE/THREONINE-PROTEIN KINASE 16 (protein)
Unique Ligands	CL, STU

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2BV5 \| pdb_00002bv5	Download File View File

CRYSTAL STRUCTURE OF THE HUMAN PROTEIN TYROSINE PHOSPHATASE PTPN5 AT 1.8A RESOLUTION

Debreczeni, J.E., Barr, A.J., Eswaran, J., Smee, C., Burgess, N., Gileadi, O., von Delft, F., Sundstrom, M., Arrowsmith, C., Edwards, A., Knapp, S.

(2006) Biochem J 395: 483-491

Released	2005-07-14
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	TYROSINE-PROTEIN PHOSPHATASE, NON-RECEPTOR TYPE 5 (protein)
Unique Ligands	GOL, SO4

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2BVA \| pdb_00002bva	Download File View File

Crystal structure of the human P21-activated kinase 4

Debreczeni, J.E., Bunkoczi, G., Eswaran, J., Filippakopoulos, P., Das, S., Fedorov, O., Sundstrom, M., Arrowsmith, C., Edwards, A., von Delft, F., Knapp, S.

(2007) Structure 15: 201

Released	2005-07-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	P21-ACTIVATED KINASE 4 (protein)

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2BZH \| pdb_00002bzh	Download File View File

CRYSTAL STRUCTURE OF THE HUMAN PIM1 IN COMPLEX WITH A RUTHENIUM ORGANOMETALLIC LIGAND RU1

Debreczeni, J.E., Bullock, A., Knapp, S., von Delft, F., Sundstrom, M., Arrowsmith, C., Weigelt, J., Edwards, A.

To be published

Released	2005-12-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	PROTO-ONCOGENE SERINE THREONINE PROTEIN KINASE PIM1 (protein)
Unique Ligands	CL, EDO, HB1

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2BZI \| pdb_00002bzi	Download File View File

CRYSTAL STRUCTURE OF THE HUMAN PIM1 IN COMPLEX WITH A RUTHENIUM ORGANOMETALLIC LIGAND RU2

Debreczeni, J.E., Bullock, A., Knapp, S., von Delft, F., Sundstrom, M., Arrowsmith, C., Weigelt, J., Edwards, A.

To be published

Released	2005-12-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	PROTO-ONCOGENE SERINE THREONINE PROTEIN KINASE PIM1 (protein)
Unique Ligands	DW2

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2BZJ \| pdb_00002bzj	Download File View File

CRYSTAL STRUCTURE OF THE HUMAN PIM1 IN COMPLEX WITH A RUTHENIUM ORGANOMETALLIC LIGAND RU3

Debreczeni, J.E., Bullock, A., Knapp, S., von Delft, F., Sundstrom, M., Arrowsmith, C., Weigelt, J., Edwards, A.

To be published

Released	2005-10-12
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	PROTO-ONCOGENE SERINE THREONINE PROTEIN KINASE PIM1 (protein)
Unique Ligands	ME3

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2BZK \| pdb_00002bzk	Download File View File

CRYSTAL STRUCTURE OF THE HUMAN PIM1 IN COMPLEX WITH AMPPNP AND PIMTIDE

Debreczeni, J.E., Bullock, A., Knapp, S., von Delft, F., Sundstrom, M., Arrowsmith, C., Weigelt, J., Edwards, A.

To be published

Released	2005-11-03
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Homo sapiens
Macromolecule	PIMTIDE (protein) PROTO-ONCOGENE SERINE THREONINE PROTEIN KINASE PIM1 (protein)
Unique Ligands	ANP

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2BZL \| pdb_00002bzl	Download File View File

CRYSTAL STRUCTURE OF THE HUMAN PROTEIN TYROSINE PHOSPHATASE N14 AT 1. 65 A RESOLUTION

Debreczeni, J.E., Barr, A., Eswaran, J., Das, S., Burgess, N., Longman, E., Fedorov, O., Gileadi, O., von Delft, F., Sundstrom, M., Arrowsmith, C., Weigelt, J., Edwards, A., Knapp, S.

(2006) Proteins 63: 1132

Released	2005-09-13
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	TYROSINE-PROTEIN PHOSPHATASE, NON-RECEPTOR TYPE 14 (protein)
Unique Ligands	EDO, SO4

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2C2H \| pdb_00002c2h	Download File View File

CRYSTAL STRUCTURE OF THE HUMAN RAC3 IN COMPLEX WITH GDP

Debreczeni, J.E., Yang, X., Zao, Y., Elkins, J., Gileadi, C., Burgess, N., Colebrook, S., Gileadi, O., Fedorov, O., Bunkoczi, G., von Delft, F., Doyle, D., Sundstrom, M., Arrowsmith, C., Weigelt, J., Edwards, A.

To be published

Released	2005-10-13
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 3 (protein)
Unique Ligands	CA, GDP, MG, SO4

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2C30 \| pdb_00002c30	Download File View File

Crystal Structure Of The Human P21-Activated Kinase 6

Filippakopoulos, P., Berridge, G., Bray, J., Burgess, N., Colebrook, S., Das, S., Eswaran, J., Gileadi, O., Papagrigoriou, E., Savitsky, P., Smee, C., Turnbull, A., Sundstrom, M., Arrowsmith, C., Weigelt, J., Edwards, A., von Delft, F., Knapp, S.

(2007) Structure 15: 201

Released	2006-02-08
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	SERINE/THREONINE-PROTEIN KINASE PAK 6 (protein)
Unique Ligands	CL, PO4

1 to 25 of 90 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1H34 | pdb_00001h34

1H9H | pdb_00001h9h

1H9I | pdb_00001h9i

1HH3 | pdb_00001hh3

1HHA | pdb_00001hha

1HHC | pdb_00001hhc

1HHF | pdb_00001hhf

1OKH | pdb_00001okh

1W7Z | pdb_00001w7z

1Z57 | pdb_00001z57

2A3K | pdb_00002a3k

2A8B | pdb_00002a8b

2BIJ | pdb_00002bij

2BL0 | pdb_00002bl0

2BP1 | pdb_00002bp1

2BUJ | pdb_00002buj

2BV5 | pdb_00002bv5

2BVA | pdb_00002bva

2BZH | pdb_00002bzh

2BZI | pdb_00002bzi

2BZJ | pdb_00002bzj

2BZK | pdb_00002bzk

2BZL | pdb_00002bzl

2C2H | pdb_00002c2h

2C30 | pdb_00002c30