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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Neudecker, P."

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Homo sapiens (6)
	Streptococcus agalactiae serogroup V (3)
	Naja kaouthia (1)
	Staphylococcus epidermidis ATCC 12228 (1)

Taxonomy

	Eukaryota (7)
	Bacteria (4)

Experimental Method

X-RAY DIFFRACTION (11)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.0 - 2.5 (5)
	2.5 - 3.0 (3)

Release Date

	2000 - 2004 (3)
	2005 - 2009 (4)
	2010 - 2014 (4)

Enzyme Classification Name

Hydrolases (7)

Symmetry Type

Asymmetric (11)

SCOP Classification

	All beta proteins (6)
	Alpha and beta proteins (a/b) (5)
	Small proteins (1)

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1 to 11 of 11 Structures

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1RRK \| pdb_00001rrk	Download File View File

Crystal Structure Analysis of the Bb segment of Factor B

Ponnuraj, K., Xu, Y., Macon, K., Moore, D., Volanakis, J.E., Narayana, S.V.

(2004) Mol Cell 14: 17-28

Released	2004-12-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Complement factor B (protein)
Unique Ligands	CO, IOD, NA

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1RS0 \| pdb_00001rs0	Download File View File

Crystal Structure Analysis of the Bb segment of Factor B complexed with Di-isopropyl-phosphate (DIP)

Ponnuraj, K., Xu, Y., Macon, K., Moore, D., Volanakis, J.E., Narayana, S.V.

(2004) Mol Cell 14: 17-28

Released	2004-12-14
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Complement factor B (protein)
Unique Ligands	DFP, IOD, MG, NA

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1RTK \| pdb_00001rtk	Download File View File

Crystal Structure Analysis of the Bb segment of Factor B complexed with 4-guanidinobenzoic acid

Ponnuraj, K., Xu, Y., Macon, K., Moore, D., Volanakis, J.E., Narayana, S.V.

(2004) Mol Cell 14: 17-28

Released	2004-12-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Complement factor B Bb fragment (protein)
Unique Ligands	GBS, IOD, MG, NA

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2ODP \| pdb_00002odp	Download File View File

Complement component C2a, the catalytic fragment of C3- and C5-convertase of human complement

Narayana, S.V.L., Krishnan, V.

(2007) J Mol Biology 367: 224-233

Released	2007-02-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Complement C2 (protein)
Unique Ligands	MG, NAG
Unique branched monosaccharides	NAG

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2ODQ \| pdb_00002odq	Download File View File

Complement component C2a, the catalytic fragment of C3- and C5-convertase of human complement

Narayana, S.V.L., Krishnan, V.

(2007) J Mol Biology 367: 224-233

Released	2007-02-06
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Complement C2 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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3ERB \| pdb_00003erb	Download File View File

The Crystal Structure of C2b, a Fragment of Complement Component C2 produced during C3-convertase Formation

Narayan, S.V.L., Krishnan, V.

(2009) Acta Crystallogr D Biol Crystallogr 65: 266-274

Released	2009-03-10
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Complement C2 (protein)

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3FRP \| pdb_00003frp	Download File View File

Crystal Structure of Cobra Venom Factor, a Co-factor for C3- and C5 convertase CVFBb

Krishnan, V., Narayana, S.V.L.

(2009) Structure 17: 611-619

Released	2009-04-28
Method	X-RAY DIFFRACTION 2.61 Å
Organisms	Naja kaouthia
Macromolecule	Cobra venom factor alpha chain (protein) Cobra venom factor beta chain (protein) Cobra venom factor gamma chain (protein)
Unique Ligands	CA

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3TVY \| pdb_00003tvy	Download File View File

Structural Analysis of Adhesive Tip pilin, GBS104 from Group B Streptococcus agalactiae

Krishnan, V., Narayana, S.V.L.

(2013) Acta Crystallogr D Biol Crystallogr 69: 1073-1089

Released	2013-03-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Streptococcus agalactiae serogroup V
Macromolecule	Cell wall surface anchor family protein (protein)
Unique Ligands	EPE, MG

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3TW0 \| pdb_00003tw0	Download File View File

Structural Analysis of Adhesive Tip pilin, GBS104 from Group B Streptococcus agalactiae

Krishnan, V., Narayana, S.V.L.

(2013) Acta Crystallogr D Biol Crystallogr 69: 1073-1089

Released	2013-03-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Streptococcus agalactiae serogroup V
Macromolecule	Cell wall surface anchor family protein (protein)
Unique Ligands	ACT, MG

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3TXA \| pdb_00003txa	Download File View File

Structural Analysis of Adhesive Tip pilin, GBS104 from Group B Streptococcus agalactiae

Krishnan, V., Narayana, S.V.L.

(2013) Acta Crystallogr D Biol Crystallogr 69: 1073-1089

Released	2013-03-27
Method	X-RAY DIFFRACTION 2.619 Å
Organisms	Streptococcus agalactiae serogroup V
Macromolecule	Cell wall surface anchor family protein (protein)
Unique Ligands	CD, LI, MG

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4JCN \| pdb_00004jcn	Download File View File

Structure of ESP, serine protease from Staphylococcus epidermidis

Krishnan, V., Sthanam, V.L.N.

(2013) J Biological Chem 288: 29440-29452

Released	2013-09-04
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Staphylococcus epidermidis ATCC 12228
Macromolecule	Glutamyl endopeptidase (protein)

1 to 11 of 11 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1RRK | pdb_00001rrk

Crystal Structure Analysis of the Bb segment of Factor B

1RS0 | pdb_00001rs0

Crystal Structure Analysis of the Bb segment of Factor B complexed with Di-isopropyl-phosphate (DIP)

1RTK | pdb_00001rtk

Crystal Structure Analysis of the Bb segment of Factor B complexed with 4-guanidinobenzoic acid

2ODP | pdb_00002odp

Complement component C2a, the catalytic fragment of C3- and C5-convertase of human complement

2ODQ | pdb_00002odq

Complement component C2a, the catalytic fragment of C3- and C5-convertase of human complement

3ERB | pdb_00003erb

The Crystal Structure of C2b, a Fragment of Complement Component C2 produced during C3-convertase Formation

3FRP | pdb_00003frp

Crystal Structure of Cobra Venom Factor, a Co-factor for C3- and C5 convertase CVFBb

3TVY | pdb_00003tvy

Structural Analysis of Adhesive Tip pilin, GBS104 from Group B Streptococcus agalactiae

3TW0 | pdb_00003tw0

Structural Analysis of Adhesive Tip pilin, GBS104 from Group B Streptococcus agalactiae

3TXA | pdb_00003txa

Structural Analysis of Adhesive Tip pilin, GBS104 from Group B Streptococcus agalactiae

4JCN | pdb_00004jcn

Structure of ESP, serine protease from Staphylococcus epidermidis

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1RRK | pdb_00001rrk

1RS0 | pdb_00001rs0

1RTK | pdb_00001rtk

2ODP | pdb_00002odp

2ODQ | pdb_00002odq

3ERB | pdb_00003erb

3FRP | pdb_00003frp

3TVY | pdb_00003tvy

3TW0 | pdb_00003tw0

3TXA | pdb_00003txa

4JCN | pdb_00004jcn