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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Orth, P."

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Search Summary

This query matches 97 Structures.

Refinements

Structure Determination Methodology

experimental (97)

Scientific Name of Source Organism

	Homo sapiens (71)
	synthetic construct (8)
	Escherichia coli (6)
	Human immunodeficiency virus 1 (4)
	Escherichia coli K-12 (3)
	Fusarium graminearum (2)
	Kluyvera cryocrescens (2)
	Synechococcus elongatus (2)
	Aquifex aeolicus (1)
	Aspergillus oryzae (1)

More...

Taxonomy

	Eukaryota (75)
	Bacteria (18)
	other sequences (8)
	Riboviria (5)
	Duplodnaviria (1)

Experimental Method

X-RAY DIFFRACTION (97)

Polymer Entity Type

	Protein (97)
	DNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (10)
	1.5 - 2.0 (53)
	2.0 - 2.5 (22)
	2.5 - 3.0 (9)
	3.0 - 3.5 (1)
	3.5 - 4.0 (2)

Release Date

	1995 - 1999 (6)
	2000 - 2004 (9)
	2005 - 2009 (16)
	2010 - 2014 (30)
	2015 - 2019 (20)
	2020 - 2024 (16)

Enzyme Classification Name

	Hydrolases (74)
	Ligases (2)
	Oxidoreductases (2)
	Lyases (1)

Symmetry Type

	Asymmetric (78)
	Cyclic (23)

SCOP Classification

	All beta proteins (32)
	Alpha and beta proteins (a+b) (24)
	Low resolution protein structures (2)
	All alpha proteins (11)
	Artifacts (11)
	Alpha and beta proteins (a/b) (9)
	Small proteins (6)

AllSelected

1 to 25 of 97 Structures

Page 1 of 4

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1A6I \| pdb_00001a6i	Download File View File

TET REPRESSOR, CLASS D VARIANT

Orth, P., Cordes, F., Schnappinger, D., Hillen, W., Saenger, W., Hinrichs, W.

(1998) J Mol Biology 279: 439-447

Released	1999-03-02
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	TETRACYCLINE REPRESSOR PROTEIN CLASS D (protein)

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1A9B \| pdb_00001a9b	Download File View File

DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS

Menssen, R., Orth, P., Ziegler, A., Saenger, W.

(1999) J Mol Biology 285: 645-653

Released	1998-10-21
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	BETA-2-MICROGLOBULIN (protein) HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-35 B*3501 (ALPHA CHAIN) (protein) PEPTIDE LPPLDITPY (protein)

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1A9E \| pdb_00001a9e	Download File View File

DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS

Menssen, R., Orth, P., Ziegler, A., Saenger, W.

(1999) J Mol Biology 285: 645-653

Released	1998-10-21
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	BETA-2-MICROGLOBULIN (protein) HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-35 B*3501 (ALPHA CHAIN) (protein) PEPTIDE LPPLDITPY (protein)

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1BJZ \| pdb_00001bjz	Download File View File

TETRACYCLINE CHELATED MG2+-ION INITIATES HELIX UNWINDING FOR TET REPRESSOR INDUCTION

Orth, P., Saenger, W., Hinrichs, W.

(1999) Biochemistry 38: 191-198

Released	1999-01-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	TETRACYCLINE REPRESSOR (protein)

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1CG9 \| pdb_00001cg9	Download File View File

COMPLEX RECOGNITION OF THE SUPERTYPIC BW6-DETERMINANT ON HLA-B AND-C MOLECULES BY THE MONOCLONAL ANTIBODY SFR8-B6

Menssen, R., Orth, P., Ziegler, A., Saenger, W.

To be published

Released	2003-11-18
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Epstein-Barr virus (strain B95-8) Homo sapiens
Macromolecule	PROTEIN (BETA-2-MICROGLOBULIN) (protein) PROTEIN (EBNA-6 NUCLEAR PROTEIN (EBNA-3C) (EBNA-4B)) (protein) PROTEIN (HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-35 B* 3501 ALPHA CHAIN) (protein)

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1CH0 \| pdb_00001ch0	Download File View File

RNASE T1 VARIANT WITH ALTERED GUANINE BINDING SEGMENT

Hoeschler, K., Hoier, H., Orth, P., Hubner, B., Saenger, W., Hahn, U.

(1999) J Mol Biology 294: 1231-1238

Released	1999-12-22
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Aspergillus oryzae
Macromolecule	PROTEIN (RIBONUCLEASE T1) (protein)
Unique Ligands	2GP, CA, CL

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1FE1 \| pdb_00001fe1	Download File View File

CRYSTAL STRUCTURE PHOTOSYSTEM II

Zouni, A., Witt, H.-T., Kern, J., Fromme, P., Krauss, N., Saenger, W., Orth, P.

(2001) Nature 409: 739-743

Released	2001-02-14
Method	X-RAY DIFFRACTION 3.8 Å
Organisms	Synechococcus elongatus
Macromolecule	Unique protein chains: 9
Unique Ligands	CD, CLA, FE, HEM, MN, PHO, PLA, TYR

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1ILX \| pdb_00001ilx	Download File View File

Excited State Dynamics in Photosystem II Revised. New Insights from the X-ray Structure.

Vasilev, S., Orth, P., Zouni, A., Owens, T.G., Bruce, D.

(2001) Proc Natl Acad Sci U S A 98: 8602-8607

Released	2001-07-18
Method	X-RAY DIFFRACTION 3.8 Å
Organisms	Synechococcus elongatus
Macromolecule	Unique protein chains: 9
Unique Ligands	CD, CLA, FE, HEM, MN, PHO, PL9

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1IRQ \| pdb_00001irq	Download File View File

Crystal structure of omega transcriptional repressor at 1.5A resolution

Murayama, K., Orth, P., De La Hoz, A.B., Alonso, J.C., Saenger, W.

(2001) J Mol Biology 314: 789-796

Released	2001-12-12
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Streptococcus pyogenes
Macromolecule	omega transcriptional repressor (protein)

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1NZE \| pdb_00001nze	Download File View File

Crystal structure of PsbQ polypeptide of photosystem II from higher plants

Calderone, V., Trabucco, M., Vujicic, A., Battistutta, R., Giacometti, G.M., Andreucci, F., Barbato, R., Zanotti, G.

(2003) EMBO Rep 4: 900-905

Released	2003-08-26
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Spinacia oleracea
Macromolecule	Oxygen-evolving enhancer protein 3 (protein)
Unique Ligands	ZN

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1ORK \| pdb_00001ork	Download File View File

TET REPRESSOR, CLASS D IN COMPLEX WITH 9-(N,N-DIMETHYLGLYCYLAMIDO)-6-DEMETHYL-6-DEOXY-TETRACYCLINE

Orth, P., Schnappinger, D., Sum, P.-E., Ellestad, G.A., Hillen, W., Saenger, W., Hinrichs, W.

(1999) J Mol Biology 285: 455-461

Released	1999-06-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	TETRACYCLINE REPRESSOR (protein)
Unique Ligands	ATC, MG

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1QEW \| pdb_00001qew	Download File View File

HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A 0201) COMPLEX WITH A NONAMERIC PEPTIDE FROM MELANOMA-ASSOCIATED ANTIGEN 3 (RESIDUES 271-279)

Orth, P., Alings, C., Saenger, W., Ziegler, A.

To be published

Released	2003-11-18
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (BETA-2-MICROGLOBULIN) (protein) PROTEIN (HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-35 B* 3501 ALPHA CHAIN) (protein) PROTEIN (MELANOMA-ASSOCIATED ANTIGEN 3) (protein)

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1QPI \| pdb_00001qpi	Download File View File

CRYSTAL STRUCTURE OF TETRACYCLINE REPRESSOR/OPERATOR COMPLEX

Orth, P., Schnappinger, D., Hillen, W., Saenger, W., Hinrichs, W.

(2000) Nat Struct Biol 7: 215-219

Released	2000-02-28
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	PROTEIN (TETRACYCLINE REPRESSOR) (protein) DNA (5'-D(CPCPTPAPTPCPAPAPTPGPAPTPAPGPA)-3') (nucleic acid) DNA (5'-D(TPCPTPAPTPCPAPTPTPGPAPTPAPGPG)-3') (nucleic acid)
Unique Ligands	IMD

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1R54 \| pdb_00001r54	Download File View File

Crystal structure of the catalytic domain of human ADAM33

Orth, P., Reicher, P., Wang, W., Prosise, W.W., Yarosh-Tomaine, T., Hammond, G., Xiao, L., Mirza, U.A., Zou, J., Strickland, C., Taremi, S.S.

(2004) J Mol Biology 335: 129-137

Released	2004-10-12
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	ADAM 33 (protein)
Unique Ligands	CA, CL, ZN
Unique branched monosaccharides	NAG

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1R55 \| pdb_00001r55	Download File View File

Crystal structure of the catalytic domain of human ADAM 33

Orth, P., Reichert, P., Wang, W., Prosise, W.W., Yarosh-Tomaine, T., Hammond, G., Xiao, L., Mirza, U.A., Zou, J., Strickland, C., Taremi, S.S., Le, H.V., Madison, V.

(2004) J Mol Biology 335: 129-137

Released	2004-10-12
Method	X-RAY DIFFRACTION 1.58 Å
Organisms	Homo sapiens
Macromolecule	ADAM 33 (protein)
Unique Ligands	097, CA, CL, ZN
Unique branched monosaccharides	MAN, NAG

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2DDF \| pdb_00002ddf	Download File View File

Crystal structure of TACE in complex with TAPI-2

Orth, P.

(2006) Protein Eng Des Sel 19: 155-161

Released	2006-03-14
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	ADAM 17 (protein)
Unique Ligands	CA, CIT, IMD, INN, IPA, ZN

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2FJ1 \| pdb_00002fj1	Download File View File

Crystal Structure Analysis of Tet Repressor (class D) in Complex with 7-Chlortetracycline-Nickel(II)

Orth, P., Saenger, W., Palm, G.J., Hinrichs, W.

(2008) J Biol Inorg Chem 13: 1097-1110

Released	2007-01-09
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	Tetracycline repressor protein class D (protein)
Unique Ligands	CL, CTC, NI

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2FV5 \| pdb_00002fv5	Download File View File

Crystal structure of TACE in complex with IK682

Orth, P., Niu, X.

(2006) Arch Biochem Biophys 451: 43-50

Released	2006-07-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	ADAM 17 (protein)
Unique Ligands	541, ZN

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2FV9 \| pdb_00002fv9	Download File View File

Crystal structure of TACE in complex with JMV 390-1

Orth, P.

(2006) Protein Eng Des Sel 19: 155-161

Released	2006-03-14
Method	X-RAY DIFFRACTION 2.02 Å
Organisms	Homo sapiens
Macromolecule	ADAM 17 (protein)
Unique Ligands	002, INN, ZN

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2JCG \| pdb_00002jcg	Download File View File

Apo form of the catabolite control protein A (ccpA) from bacillus megaterium, with the DNA binding domain

Singh, R.K., Panjikar, S., Palm, G.J., Hinrichs, W.

(2007) Acta Crystallogr Sect F Struct Biol Cryst Commun 63: 253

Released	2007-03-06
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Priestia megaterium
Macromolecule	GLUCOSE-RESISTANCE AMYLASE REGULATOR (protein)
Unique Ligands	CA

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2VKE \| pdb_00002vke	Download File View File

Tet repressor class D complexed with cobalt and tetracycline

Palm, G.J., Hinrichs, W.

(2008) J Biol Inorg Chem 13: 1097

Released	2008-07-01
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Escherichia coli
Macromolecule	TETRACYCLINE REPRESSOR PROTEIN CLASS D (protein)
Unique Ligands	CL, CO, TAC

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2VPR \| pdb_00002vpr	Download File View File

Tet repressor class H in complex with 5a,6- anhydrotetracycline-Mg

Schuldt, L., Palm, G., Hinrichs, W.

(2008) J Mol Biology 378: 896

Released	2008-03-11
Method	X-RAY DIFFRACTION 2.49 Å
Organisms	Pasteurella multocida
Macromolecule	TETRACYCLINE RESISTANCE REPRESSOR PROTEIN (protein)
Unique Ligands	MG, SO4, TDC

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3D85 \| pdb_00003d85	Download File View File

Crystal structure of IL-23 in complex with neutralizing FAB

Beyer, B.M., Ingram, R., Ramanathan, L., Reichert, P., Le, H., Madison, V.

(2008) J Mol Biology 382: 942-955

Released	2008-09-02
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	FAB of antibody 7G10, heavy chain (protein) FAB of antibody 7G10, light chain (protein) Interleukin-12 subunit p40 (protein) Interleukin-23 subunit p19 (protein)
Unique Ligands	IMD, MPD

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3D87 \| pdb_00003d87	Download File View File

Crystal structure of Interleukin-23

Beyer, B.M., Ingram, R., Ramanathan, L., Reichert, P., Le, H., Madison, V.

(2008) J Mol Biology 382: 942-955

Released	2008-09-02
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Interleukin-12 subunit p40 (protein) Interleukin-23 subunit p19 (protein)
Unique Ligands	K, MAN, PO4