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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Reverter, D."

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Search Summary

This query matches 85 Structures.

Refinements

Structure Determination Methodology

experimental (85)

Scientific Name of Source Organism

	Homo sapiens (56)
	Hirudo medicinalis (5)
	Arabidopsis thaliana (3)
	Malacoplasma penetrans (3)
	Pseudomonas aeruginosa (3)
	Pyrococcus furiosus (3)
	Bos taurus (2)
	Bradyrhizobium (2)
	Nerita versicolor (2)
	Vibrio alginolyticus (2)

More...

Taxonomy

	Eukaryota (69)
	Bacteria (14)
	Archaea (4)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (82)
	SOLUTION NMR (3)

Polymer Entity Type

	Protein (85)
	DNA (2)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (14)
	1.5 - 2.0 (25)
	2.0 - 2.5 (18)
	2.5 - 3.0 (16)
	3.0 - 3.5 (8)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (9)
	2005 - 2009 (9)
	2010 - 2014 (16)
	2015 - 2019 (30)
	2020 - 2024 (20)

Enzyme Classification Name

	Hydrolases (29)
	Transferases (14)
	Ligases (5)
	Lyases (1)

Symmetry Type

	Asymmetric (48)
	Cyclic (16)
	Dihedral (20)
	Tetrahedral (2)

SCOP Classification

	Alpha and beta proteins (a+b) (21)
	All beta proteins (19)
	Alpha and beta proteins (a/b) (11)
	Artifacts (8)
	All alpha proteins (8)
	Small proteins (6)

AllSelected

1 to 25 of 85 Structures

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1AYE \| pdb_00001aye	Download File View File

HUMAN PROCARBOXYPEPTIDASE A2

Garcia-Saez, I., Reverte, D., Vendrell, J., Aviles, F.X., Coll, M.

(1997) EMBO J 16: 6906-6913

Released	1999-01-13
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	PROCARBOXYPEPTIDASE A2 (protein)
Unique Ligands	ZN

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1DTD \| pdb_00001dtd	Download File View File

CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN THE LEECH CARBOXYPEPTIDASE INHIBITOR AND THE HUMAN CARBOXYPEPTIDASE A2 (LCI-CPA2)

Reverter, D., Fernandez-Catalan, C., Bode, W., Holak, T.A., Aviles, F.X.

(2000) Nat Struct Biol 7: 322-328

Released	2000-07-12
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	CARBOXYPEPTIDASE A2 (protein) METALLOCARBOXYPEPTIDASE INHIBITOR (protein)
Unique Ligands	GLU, ZN

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1DTV \| pdb_00001dtv	Download File View File

NMR STRUCTURE OF THE LEECH CARBOXYPEPTIDASE INHIBITOR (LCI)

Reverter, D., Fernandez-Catalan, C., Bode, W., Holak, T.A., Aviles, F.X.

(2000) Nat Struct Biol 7: 322-328

Released	2000-07-19
Method	SOLUTION NMR
Organisms	Hirudo medicinalis
Macromolecule	CARBOXYPEPTIDASE INHIBITOR (protein)

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1JQG \| pdb_00001jqg	Download File View File

Crystal Structure of the Carboxypeptidase A from Helicoverpa Armigera

Estebanez-Perpina, E., Bayes, A., Vendrell, J., Jongsma, M.A., Bown, D.P., Gatehouse, J.A., Huber, R., Bode, W., Aviles, F.X., Reverter, D.

(2001) J Mol Biology 313: 629-638

Released	2002-08-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Helicoverpa armigera
Macromolecule	carboxypeptidase A (protein)
Unique Ligands	ZN

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1KFU \| pdb_00001kfu	Download File View File

Crystal Structure of Human m-Calpain Form II

Strobl, S., Fernandez-Catalan, C., Braun, M., Huber, R., Masumoto, H., Nakagawa, K., Irie, A., Sorimachi, H., Bourenkow, G., Bartunik, H., Suzuki, K., Bode, W.

(2000) Proc Natl Acad Sci U S A 97: 588-592

Released	2001-12-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	M-CALPAIN LARGE SUBUNIT (protein) M-CALPAIN SMALL SUBUNIT (protein)

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1KFX \| pdb_00001kfx	Download File View File

Crystal Structure of Human m-Calpain Form I

Strobl, S., Fernandez-Catalan, C., Braun, M., Huber, R., Masumoto, H., Nakagawa, K., Irie, A., Sorimachi, H., Bourenkow, G., Bartunik, H., Suzuki, K., Bode, W.

(2000) Proc Natl Acad Sci U S A 97: 588-592

Released	2001-12-07
Method	X-RAY DIFFRACTION 3.15 Å
Organisms	Homo sapiens
Macromolecule	M-CALPAIN LARGE SUBUNIT (protein) M-CALPAIN SMALL SUBUNIT (protein)

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1TGZ \| pdb_00001tgz	Download File View File

Structure of human Senp2 in complex with SUMO-1

Reverter, D., Lima, C.D.

(2004) Structure 12: 1519-1531

Released	2004-09-14
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Sentrin-specific protease 2 (protein) Ubiquitin-like protein SMT3C (protein)
Unique Ligands	SO4

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1TH0 \| pdb_00001th0	Download File View File

Structure of human Senp2

Reverter, D., Lima, C.D.

(2004) Structure 12: 1519-1531

Released	2004-09-14
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Sentrin-specific protease 2 (protein)

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1UWY \| pdb_00001uwy	Download File View File

Crystal structure of human carboxypeptidase M

Maskos, K., Reverter, D., Bode, W.

(2004) J Mol Biology 338: 257

Released	2004-04-08
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	CARBOXYPEPTIDASE M (protein)
Unique Ligands	ZN
Unique branched monosaccharides	NAG

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1XT9 \| pdb_00001xt9	Download File View File

Crystal Structure of Den1 in complex with Nedd8

Reverter, D., Wu, K., Erdene, T.G., Pan, Z.Q., Wilkinson, K.D., Lima, C.D.

(2005) J Mol Biology 345: 141-151

Released	2004-12-21
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Neddylin (protein) Sentrin-specific protease 8 (protein)

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1Z5S \| pdb_00001z5s	Download File View File

Crystal structure of a complex between UBC9, SUMO-1, RANGAP1 and NUP358/RANBP2

Reverter, D., Lima, C.D.

(2005) Nature 435: 687-692

Released	2005-06-07
Method	X-RAY DIFFRACTION 3.01 Å
Organisms	Homo sapiens
Macromolecule	Ran GTPase-activating protein 1 (protein) Ran-binding protein 2 (protein) Ubiquitin-conjugating enzyme E2 I (protein) Ubiquitin-like protein SMT3C (protein)

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1ZFI \| pdb_00001zfi	Download File View File

Solution structure of the leech carboxypeptidase inhibitor

Arolas, J.L., D'Silva, L., Popowicz, G.M., Aviles, F.X., Holak, T.A., Ventura, S.

(2005) Structure 13: 1193-1202

Released	2005-09-13
Method	SOLUTION NMR
Organisms	Hirudo medicinalis
Macromolecule	Metallocarboxypeptidase inhibitor (protein)

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1ZFL \| pdb_00001zfl	Download File View File

Solution structure of III-A, the major intermediate in the oxidative folding of leech carboxypeptidase inhibitor

Arolas, J.L., D'Silva, L., Popowicz, G.M., Aviles, F.X., Holak, T.A., Ventura, S.

(2005) Structure 13: 1193-1202

Released	2005-09-13
Method	SOLUTION NMR
Organisms	Hirudo medicinalis
Macromolecule	Metallocarboxypeptidase inhibitor (protein)

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2ABZ \| pdb_00002abz	Download File View File

Crystal structure of C19A/C43A mutant of leech carboxypeptidase inhibitor in complex with bovine carboxypeptidase A

Arolas, J.L., Popowicz, G.M., Bronsoms, S., Aviles, F.X., Huber, R., Holak, T.A., Ventura, S.

(2005) J Mol Biology 352: 961-975

Released	2006-01-31
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Bos taurus Hirudo medicinalis
Macromolecule	Carboxypeptidase A1 (protein) Metallocarboxypeptidase inhibitor (protein)
Unique Ligands	ZN

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2IO0 \| pdb_00002io0	Download File View File

Crystal structure of human Senp2 in complex with preSUMO-2

Reverter, D., Lima, C.D.

(2006) Nat Struct Mol Biol 13: 1060-1068

Released	2006-11-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Sentrin-specific protease 2 (protein) Small ubiquitin-related modifier 2 precursor (protein)
Unique Ligands	SO4

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2IO1 \| pdb_00002io1	Download File View File

Crystal structure of human Senp2 in complex with preSUMO-3

Reverter, D., Lima, C.D.

(2006) Nat Struct Mol Biol 13: 1060-1068

Released	2006-11-14
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Sentrin-specific protease 2 (protein) Small ubiquitin-related modifier 3 precursor (protein)

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2IO2 \| pdb_00002io2	Download File View File

Crystal structure of human Senp2 in complex with RanGAP1-SUMO-1

Reverter, D., Lima, C.D.

(2006) Nat Struct Mol Biol 13: 1060-1068

Released	2006-11-21
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Ran GTPase-activating protein 1 (protein) Sentrin-specific protease 2 (protein) Small ubiquitin-related modifier 1 (protein)

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2IO3 \| pdb_00002io3	Download File View File

Crystal structure of human Senp2 in complex with RanGAP1-SUMO-2

Reverter, D., Lima, C.D.

(2006) Nat Struct Mol Biol 13: 1060-1068

Released	2006-11-14
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	Ran GTPase-activating protein 1 (protein) Sentrin-specific protease 2 (protein) Small ubiquitin-related modifier 2 (protein)

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3EAY \| pdb_00003eay	Download File View File

Crystal structure of the human SENP7 catalytic domain

Lima, C.D., Reverter, D.

(2008) J Biological Chem 283: 32045-32055

Released	2008-09-16
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Sentrin-specific protease 7 (protein)
Unique Ligands	SO4

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3UIN \| pdb_00003uin	Download File View File

Complex between human RanGAP1-SUMO2, UBC9 and the IR1 domain from RanBP2

Gareau, J.R., Reverter, D., Lima, C.D.

(2012) J Biological Chem 287: 4740-4751

Released	2011-12-28
Method	X-RAY DIFFRACTION 2.597 Å
Organisms	Homo sapiens
Macromolecule	E3 SUMO-protein ligase RanBP2 (protein) Ran GTPase-activating protein 1 (protein) SUMO-conjugating enzyme UBC9 (protein) Small ubiquitin-related modifier 2 (protein)

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3UIO \| pdb_00003uio	Download File View File

Complex between human RanGAP1-SUMO2, UBC9 and the IR1 domain from RanBP2 containing IR2 Motif II

Gareau, J.R., Reverter, D., Lima, C.D.

(2012) J Biological Chem 287: 4740-4751

Released	2011-12-28
Method	X-RAY DIFFRACTION 2.602 Å
Organisms	Homo sapiens
Macromolecule	E3 SUMO-protein ligase RanBP2 (protein) Ran GTPase-activating protein 1 (protein) SUMO-conjugating enzyme UBC9 (protein) Small ubiquitin-related modifier 2 (protein)

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3UIP \| pdb_00003uip	Download File View File

Complex between human RanGAP1-SUMO1, UBC9 and the IR1 domain from RanBP2 containing IR2 Motif II

Gareau, J.R., Reverter, D., Lima, C.D.

(2012) J Biological Chem 287: 4740-4751

Released	2011-12-28
Method	X-RAY DIFFRACTION 2.293 Å
Organisms	Homo sapiens
Macromolecule	E3 SUMO-protein ligase RanBP2 (protein) Ran GTPase-activating protein 1 (protein) SUMO-conjugating enzyme UBC9 (protein) Small ubiquitin-related modifier 1 (protein)

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3ZKE \| pdb_00003zke	Download File View File

Structure of LC8 in complex with Nek9 peptide

Gallego, P., Velazquez-Campoy, A., Regue, L., Roig, J., Reverter, D.

(2013) J Biological Chem 288: 12283

Released	2013-03-20
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	DYNEIN LIGHT CHAIN 1, CYTOPLASMIC (protein) NEK9 PROTEIN (protein)

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3ZKF \| pdb_00003zkf	Download File View File

Structure of LC8 in complex with Nek9 phosphopeptide

Gallego, P., Velazquez-Campoy, A., Regue, L., Roig, J., Reverter, D.

(2013) J Biological Chem 288: 12283

Released	2013-03-20
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	DYNEIN LIGHT CHAIN 1, CYTOPLASMIC (protein) NEK9 PROTEIN (protein)

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3ZO5 \| pdb_00003zo5	Download File View File

Structure of SENP2-Loop1 in complex with preSUMO-2

Alegre, K.O., Reverter, D.

(2014) Protein Sci 23: 433

Released	2014-01-29
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens
Macromolecule	SENTRIN-SPECIFIC PROTEASE 2 (protein) SMALL UBIQUITIN-RELATED MODIFIER 2 (protein)

1 to 25 of 85 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1AYE | pdb_00001aye

1DTD | pdb_00001dtd

1DTV | pdb_00001dtv

1JQG | pdb_00001jqg

1KFU | pdb_00001kfu

1KFX | pdb_00001kfx

1TGZ | pdb_00001tgz

1TH0 | pdb_00001th0

1UWY | pdb_00001uwy

1XT9 | pdb_00001xt9

1Z5S | pdb_00001z5s

1ZFI | pdb_00001zfi

1ZFL | pdb_00001zfl

2ABZ | pdb_00002abz

2IO0 | pdb_00002io0

2IO1 | pdb_00002io1

2IO2 | pdb_00002io2

2IO3 | pdb_00002io3

3EAY | pdb_00003eay

3UIN | pdb_00003uin

3UIO | pdb_00003uio

3UIP | pdb_00003uip

3ZKE | pdb_00003zke

3ZKF | pdb_00003zkf

3ZO5 | pdb_00003zo5