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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Schmitz, C."

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Search Summary

This query matches 14 Structures.

Refinements

Structure Determination Methodology

experimental (14)

Scientific Name of Source Organism

	Flavobacterium johnsoniae UW101 (5)
	Homo sapiens (3)
	Mus musculus (3)
	Porphyromonas gingivalis W83 (3)
	Astacus astacus (2)
	Escherichia coli (1)
	synthetic construct (1)

Taxonomy

	Bacteria (9)
	Eukaryota (5)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (12)
	SOLUTION NMR (2)

Polymer Entity Type

	Protein (14)
	RNA (1)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (5)
	2.5 - 3.0 (4)
	3.0 - 3.5 (2)

Release Date

	2000 - 2004 (1)
	2010 - 2014 (1)
	2015 - 2019 (3)
	2020 - 2024 (9)

Enzyme Classification Name

	Hydrolases (3)
	Transferases (1)

Symmetry Type

	Cyclic (9)
	Asymmetric (5)

SCOP Classification

	Alpha and beta proteins (a+b) (2)
	All alpha proteins (1)
	Alpha and beta proteins (a/b) (1)
	Artifacts (1)
	Small proteins (1)

AllSelected

1 to 14 of 14 Structures

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1PPQ \| pdb_00001ppq	Download File View File

NMR structure of 16th module of Immune Adherence Receptor, Cr1 (Cd35)

O'Leary, J.M., Bromek, K., Black, G.M., Uhrinova, S., Schmitz, C., Krych, M., Atkinson, J.P., Uhrin, D., Barlow, P.N.

(2004) Protein Sci 13: 1238-1250

Released	2004-05-04
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Complement receptor type 1 (protein)

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2XY8 \| pdb_00002xy8	Download File View File

Paramagnetic-based NMR structure of the complex between the N- terminal epsilon domain and the theta domain of the DNA polymerase III

Schmitz, C., Bonvin, A.M.J.J.

(2011) J Biomol NMR 50: 263-266

Released	2011-06-29
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	DNA POLYMERASE III SUBUNIT EPSILON (protein) DNA POLYMERASE III SUBUNIT THETA (protein)
Unique Ligands	CA

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6HPV \| pdb_00006hpv	Download File View File

Crystal structure of mouse fetuin-B

Fahrenkamp, D., Dietzel, E., de Sanctis, D., Jovine, L.

(2019) IUCrJ 6: 317-330

Released	2019-02-20
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mus musculus
Macromolecule	Fetuin-B (protein)
Unique Ligands	ACT, NAG

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6HT9 \| pdb_00006ht9	Download File View File

Mouse fetuin-B in complex with crayfish astacin

Gomis-Ruth, F.X., Goulas, T., Guevara, T., Cuppari, A.

(2019) IUCrJ 6: 317-330

Released	2019-03-13
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Astacus astacus Mus musculus
Macromolecule	Astacin (protein) Fetuin-B (protein)
Unique Ligands	GOL, NAG, ZN
Unique branched monosaccharides	NAG

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6SAZ \| pdb_00006saz	Download File View File

Cleaved human fetuin-b in complex with crayfish astacin

Gomis-Ruth, F.X., Guevara, T., Cuppari, A., Korschgen, H., Schmitz, C., Kuske, M., Yiallouros, I., Floehr, J., Jahnen-Dechent, W., Stocker, W.

(2019) Sci Rep 9: 14683-14683

Released	2019-10-23
Method	X-RAY DIFFRACTION 3 Å
Organisms	Astacus astacus Homo sapiens
Macromolecule	Astacin (protein) Fetuin-B (protein)
Unique Ligands	NAG, ZN
Unique branched monosaccharides	BMA, FUC, NAG

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7AUW \| pdb_00007auw	Download File View File

Inhibitory complex of human meprin beta with mouse fetuin-B.

Eckhard, U., Gomis-Ruth, F.X.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-04-14
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Fetuin-B (protein) Meprin A subunit beta (protein)
Unique Ligands	NA, NAG, SO4, ZN
Unique branched monosaccharides	BMA, FUC, GLC, MAN, NAG

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7PV7 \| pdb_00007pv7	Download File View File

Crystal structure of dimeric Porphyromonas gingivalis PorX, a type 9 secretion system response regulator.

Schmitz, C.A., Madej, M., Potempa, J., Sola, M.

(2022) Nucleic Acids Res 50: 12558-12577

Released	2022-12-14
Method	X-RAY DIFFRACTION 2.41 Å
Organisms	Porphyromonas gingivalis W83
Macromolecule	Response regulator (protein)
Unique Ligands	BEF, FMT, GOL, MG, ZN

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7PVA \| pdb_00007pva	Download File View File

1.9 Angstrom crystal structure of dimeric PorX, co-crystallized in the presence of zinc

Schmitz, C.A., Madej, M., Potempa, J., Sola, M.

(2022) Nucleic Acids Res 50: 12558-12577

Released	2022-12-14
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Porphyromonas gingivalis W83
Macromolecule	Response regulator (protein)
Unique Ligands	BEF, CL, FMT, GOL, MG, ZN

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7PVK \| pdb_00007pvk	Download File View File

X-ray structure of dimeric PorX (T272A mutant), in complex with pGpG.

Schmitz, C.A., Madej, M., Potempa, J., Sola, M.

(2022) Nucleic Acids Res 50: 12558-12577

Released	2022-12-14
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Porphyromonas gingivalis W83 synthetic construct
Macromolecule	Response regulator (protein) pGpG (nucleic acid)
Unique Ligands	BEF, FMT, GOL, MG, ZN

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8TED \| pdb_00008ted	Download File View File

PorX primitive orthorhombic crystal form

Saran, A., Zeytuni, N.

(2024) PNAS Nexus 3: pgae316-pgae316

Released	2024-04-17
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Flavobacterium johnsoniae UW101
Macromolecule	Response regulator receiver protein (protein)
Unique Ligands	ACT, BR, CA

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8TEF \| pdb_00008tef	Download File View File

PorX primitive monoclinic crystal form

Saran, A., Zeytuni, N.

(2024) PNAS Nexus 3: pgae316-pgae316

Released	2024-04-17
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Flavobacterium johnsoniae UW101
Macromolecule	Response regulator receiver protein (protein)
Unique Ligands	MG, SO4

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8TFF \| pdb_00008tff	Download File View File

PorX with BeF3 phosphate analog

Saran, A., Zeytuni, N.

(2024) PNAS Nexus 3: pgae316-pgae316

Released	2024-04-17
Method	X-RAY DIFFRACTION 2.34 Å
Organisms	Flavobacterium johnsoniae UW101
Macromolecule	Response regulator receiver protein (protein)
Unique Ligands	ACT, BEF, CA

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8TFM \| pdb_00008tfm	Download File View File

PorX with Zn (primitive orthorhombic crystal form)

Saran, A., Zeytuni, N.

(2024) PNAS Nexus 3: pgae316-pgae316

Released	2024-04-17
Method	X-RAY DIFFRACTION 2.72 Å
Organisms	Flavobacterium johnsoniae UW101
Macromolecule	Response regulator receiver protein (protein)
Unique Ligands	GOL, ZN

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8THP \| pdb_00008thp	Download File View File

PorX phosphatase null mutant (T271V)

Saran, A., Zeytuni, N.

(2024) PNAS Nexus 3: pgae316-pgae316

Released	2024-04-17
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Flavobacterium johnsoniae UW101
Macromolecule	Response regulator receiver protein (protein)
Unique Ligands	CA, GOL

1 to 14 of 14 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1PPQ | pdb_00001ppq

NMR structure of 16th module of Immune Adherence Receptor, Cr1 (Cd35)

2XY8 | pdb_00002xy8

Paramagnetic-based NMR structure of the complex between the N- terminal epsilon domain and the theta domain of the DNA polymerase III

6HPV | pdb_00006hpv

Crystal structure of mouse fetuin-B

6HT9 | pdb_00006ht9

Mouse fetuin-B in complex with crayfish astacin

6SAZ | pdb_00006saz

Cleaved human fetuin-b in complex with crayfish astacin

7AUW | pdb_00007auw

Inhibitory complex of human meprin beta with mouse fetuin-B.

7PV7 | pdb_00007pv7

Crystal structure of dimeric Porphyromonas gingivalis PorX, a type 9 secretion system response regulator.

7PVA | pdb_00007pva

1.9 Angstrom crystal structure of dimeric PorX, co-crystallized in the presence of zinc

7PVK | pdb_00007pvk

X-ray structure of dimeric PorX (T272A mutant), in complex with pGpG.

8TED | pdb_00008ted

PorX primitive orthorhombic crystal form

8TEF | pdb_00008tef

PorX primitive monoclinic crystal form

8TFF | pdb_00008tff

PorX with BeF3 phosphate analog

8TFM | pdb_00008tfm

PorX with Zn (primitive orthorhombic crystal form)

8THP | pdb_00008thp

PorX phosphatase null mutant (T271V)

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1PPQ | pdb_00001ppq

2XY8 | pdb_00002xy8

6HPV | pdb_00006hpv

6HT9 | pdb_00006ht9

6SAZ | pdb_00006saz

7AUW | pdb_00007auw

7PV7 | pdb_00007pv7

7PVA | pdb_00007pva

7PVK | pdb_00007pvk

8TED | pdb_00008ted

8TEF | pdb_00008tef

8TFF | pdb_00008tff

8TFM | pdb_00008tfm

8THP | pdb_00008thp