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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Sondermann, H."

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Search Summary

This query matches 118 Structures.

Refinements

Structure Determination Methodology

experimental (118)

Scientific Name of Source Organism

	Homo sapiens (39)
	synthetic construct (27)
	Bartonella henselae (15)
	Pseudomonas aeruginosa PAO1 (11)
	Vibrio cholerae (8)
	Pseudomonas fluorescens Pf0-1 (7)
	Rattus norvegicus (7)
	Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (5)
	Aequorea victoria (4)
	Brucella melitensis (4)

More...

Taxonomy

	Bacteria (62)
	Eukaryota (52)
	other sequences (27)

Experimental Method

	X-RAY DIFFRACTION (110)
	ELECTRON MICROSCOPY (8)

Polymer Entity Type

	Protein (118)
	RNA (24)
	DNA (3)

Refinement Resolution (Å)

	1.0 - 1.5 (8)
	1.5 - 2.0 (40)
	2.0 - 2.5 (30)
	2.5 - 3.0 (20)
	3.0 - 3.5 (15)
	3.5 - 4.0 (3)
	4.0 - 4.5 (2)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (10)
	2005 - 2009 (24)
	2010 - 2014 (30)
	2015 - 2019 (25)
	2020 - 2024 (28)

Enzyme Classification Name

	Hydrolases (41)
	Transferases (9)

Membrane Protein Annotation

	OPM (2)
	mpstruc (2)

Symmetry Type

	Asymmetric (61)
	Cyclic (41)
	Dihedral (30)
	Helical (3)

SCOP Classification

	Alpha and beta proteins (a/b) (17)
	Alpha and beta proteins (a+b) (6)
	All alpha proteins (10)
	All beta proteins (3)
	Artifacts (3)

AllSelected

1 to 25 of 118 Structures

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1BYQ \| pdb_00001byq	Download File View File

HSP90 N-TERMINAL DOMAIN BOUND TO ADP-MG

Russo, A.A., Pavletich, N.P.

(1998) J Cell Biol 143: 901-910

Released	1998-10-28
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (HEAT SHOCK PROTEIN 90) (protein)
Unique Ligands	ADP, MG

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1HX1 \| pdb_00001hx1	Download File View File

CRYSTAL STRUCTURE OF A BAG DOMAIN IN COMPLEX WITH THE HSC70 ATPASE DOMAIN

Sondermann, H., Scheufler, C., Moarefi, I.

(2001) Science 291: 1553-1557

Released	2001-03-07
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bos taurus Homo sapiens
Macromolecule	BAG family molecular chaperone regulator 1 (protein) Heat shock 70 kDa protein 8 (protein)
Unique Ligands	TRS

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1NVU \| pdb_00001nvu	Download File View File

Structural evidence for feedback activation by RasGTP of the Ras-specific nucleotide exchange factor SOS

Margarit, S.M., Sondermann, H., Hall, B.E., Nagar, B., Hoelz, A., Pirruccello, M., Bar-Sagi, D., Kuriyan, J.

(2003) Cell 112: 685-695

Released	2003-04-01
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Son of sevenless protein homolog 1 (protein) Transforming protein p21/H-RAS-1 (protein)
Unique Ligands	GTP, MG, PO4

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1NVV \| pdb_00001nvv	Download File View File

Structural evidence for feedback activation by RasGTP of the Ras-specific nucleotide exchange factor SOS

Margarit, S.M., Sondermann, H., Hall, B.E., Nagar, B., Hoelz, A., Pirruccello, M., Bar-Sagi, D., Kuriyan, J.

(2003) Cell 112: 685-695

Released	2003-04-01
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Homo sapiens
Macromolecule	Son of sevenless protein homolog 1 (protein) Transforming protein p21/H-RAS-1 (protein)
Unique Ligands	GNP, MG, PO4

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1NVW \| pdb_00001nvw	Download File View File

Structural evidence for feedback activation by RasGTP of the Ras-specific nucleotide exchange factor SOS

Margarit, S.M., Sondermann, H., Hall, B.E., Nagar, B., Hoelz, A., Pirruccello, M., Bar-Sagi, D., Kuriyan, J.

(2003) Cell 112: 685-695

Released	2003-04-01
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Son of sevenless protein homolog 1 (protein) Transforming protein p21/H-RAS-1 (protein)
Unique Ligands	GNP, MG, PO4

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1NVX \| pdb_00001nvx	Download File View File

Structural evidence for feedback activation by RasGTP of the Ras-specific nucleotide exchange factor SOS

Margarit, S.M., Sondermann, H., Hall, B.E., Nagar, B., Hoelz, A., Pirruccello, M., Bar-Sagi, D., Kuriyan, J.

(2003) Cell 112: 685-695

Released	2003-04-01
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	Son of sevenless protein homolog 1 (protein) Transforming protein p21/H-RAS-1 (protein)
Unique Ligands	GTP, MG, PO4

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1OEB \| pdb_00001oeb	Download File View File

Mona/Gads SH3C domain

Harkiolaki, M., Lewitzky, M., Gilbert, R.J.C., Jones, E.Y., Bourette, R.P., Mouchiroud, G., Sondermann, H., Moarefi, I., Feller, S.M.

(2003) EMBO J 22: 2571

Released	2003-04-02
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Mus musculus
Macromolecule	GRB2-RELATED ADAPTOR PROTEIN 2 (protein) LYMPHOCYTE CYTOSOLIC PROTEIN 2 (protein)
Unique Ligands	CD

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1Q9C \| pdb_00001q9c	Download File View File

Crystal Structure of the Histone domain of Son of Sevenless

Sondermann, H., Soisson, S.M., Bar-Sagi, D., Kuriyan, J.

(2003) Structure 11: 1583-1593

Released	2003-12-09
Method	X-RAY DIFFRACTION 3.21 Å
Organisms	Homo sapiens
Macromolecule	Son of sevenless protein (protein)

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1XD2 \| pdb_00001xd2	Download File View File

Crystal Structure of a ternary Ras:SOS:Ras*GDP complex

Sondermann, H., Soisson, S.M., Boykevisch, S., Yang, S.S., Bar-Sagi, D., Kuriyan, J.

(2004) Cell 119: 393-405

Released	2004-11-02
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Son of sevenless protein homolog 1 (protein) Transforming protein p21/H-Ras-1 (protein)
Unique Ligands	GDP, MG, PO4

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1XD4 \| pdb_00001xd4	Download File View File

Crystal structure of the DH-PH-cat module of Son of Sevenless (SOS)

Sondermann, H., Soisson, S.M., Boykevisch, S., Yang, S.S., Bar-Sagi, D., Kuriyan, J.

(2004) Cell 119: 393-405

Released	2004-11-02
Method	X-RAY DIFFRACTION 3.64 Å
Organisms	Homo sapiens
Macromolecule	Son of sevenless protein homolog 1 (protein)

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1XDV \| pdb_00001xdv	Download File View File

Experimentally Phased Structure of Human the Son of Sevenless protein at 4.1 Ang.

Sondermann, H., Soisson, S.M., Boykevisch, S., Yang, S.S., Bar-Sagi, D., Kuriyan, J.

(2004) Cell 119: 393-405

Released	2004-11-02
Method	X-RAY DIFFRACTION 4.1 Å
Organisms	Homo sapiens
Macromolecule	Son of sevenless protein homolog 1 (protein)

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1YVL \| pdb_00001yvl	Download File View File

Structure of Unphosphorylated STAT1

Mao, X., Ren, Z., Parker, G.N., Sondermann, H., Pastorello, M.A., Wang, W., McMurray, J.S., Demeler, B., Darnell Jr., J.E., Chen, X.

(2005) Mol Cell 17: 761-771

Released	2005-03-22
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	5-residue peptide (protein) Signal transducer and activator of transcription 1-alpha/beta (protein)
Unique Ligands	AU

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2II0 \| pdb_00002ii0	Download File View File

Crystal Structure of catalytic domain of Son of sevenless (Rem-Cdc25) in the absence of Ras

Freedman, T.S., Sondermann, H., Friedland, G.D., Kortemme, T., Bar-Sagi, D., Marqusee, S., Kuriyan, J.

(2006) Proc Natl Acad Sci U S A 103: 16692-16697

Released	2006-10-31
Method	X-RAY DIFFRACTION 2.02 Å
Organisms	Homo sapiens
Macromolecule	Son of sevenless homolog 1 (protein)

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2IJE \| pdb_00002ije	Download File View File

Crystal Structure of the Cdc25 domain of RasGRF1

Freedman, T.S., Kuriyan, J.

(2006) Proc Natl Acad Sci U S A 103: 16692-16697

Released	2006-10-31
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Mus musculus
Macromolecule	Guanine nucleotide-releasing protein (protein)
Unique Ligands	GOL

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3BRE \| pdb_00003bre	Download File View File

Crystal Structure of P.aeruginosa PA3702

De, N., Pirruccello, M., Krasteva, P.V., Bae, N., Raghavan, R.V., Sondermann, H.

(2008) PLoS Biol 6: e67-e67

Released	2008-04-01
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Probable two-component response regulator (protein)
Unique Ligands	C2E, MG

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3DLN \| pdb_00003dln	Download File View File

Crystal structure of the binding domain of the AMPA subunit GluR3 bound to glutamate

Ahmed, A.H., Wang, Q., Sondermann, H., Oswald, R.E.

(2008) Proteins 75: 628-637

Released	2008-11-25
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor 3 (protein)
Unique Ligands	GLU, ZN

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3DP4 \| pdb_00003dp4	Download File View File

Crystal structure of the binding domain of the AMPA subunit GluR3 bound to AMPA

Ahmed, A.H., Wang, Q., Sondermann, H., Oswald, R.E.

(2008) Proteins 75: 628-637

Released	2008-11-25
Method	X-RAY DIFFRACTION 2.11 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor 3 (protein)
Unique Ligands	AMQ, ZN

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3DP6 \| pdb_00003dp6	Download File View File

Crystal structure of the binding domain of the AMPA subunit GluR2 bound to glutamate

Ahmed, A.H., Wang, Q., Sondermann, H., Oswald, R.E.

(2008) Proteins 75: 628-637

Released	2008-11-25
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Rattus norvegicus
Macromolecule	Glutamate receptor 2 (protein)
Unique Ligands	GLU, ZN

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3DYT \| pdb_00003dyt	Download File View File

Crystal structure of Snx9PX-BAR (230-595), C2221

Wang, Q., Kaan, H.Y.K., Sondermann, H.

(2008) Structure 16: 1574-1587

Released	2008-09-16
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Homo sapiens
Macromolecule	Sorting nexin-9 (protein)
Unique Ligands	SO4

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3DYU \| pdb_00003dyu	Download File View File

Crystal structure of Snx9PX-BAR (230-595), H32

Wang, Q., Kaan, H.Y.K., Sondermann, H.

(2008) Structure 16: 1574-1587

Released	2008-09-16
Method	X-RAY DIFFRACTION 4.1 Å
Organisms	Homo sapiens
Macromolecule	Sorting nexin-9 (protein)

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3EVP \| pdb_00003evp	Download File View File

crystal structure of circular-permutated EGFP

Wang, Q., Shui, B., Kotlikoff, M.I., Sondermann, H.

(2008) Structure 16: 1817-1827

Released	2008-12-09
Method	X-RAY DIFFRACTION 1.453 Å
Organisms	Aequorea victoria
Macromolecule	Green fluorescent protein,Green fluorescent protein (protein)

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3EVR \| pdb_00003evr	Download File View File

Crystal structure of Calcium bound monomeric GCAMP2

Wang, Q., Shui, B., Kotlikoff, M.I., Sondermann, H.

(2008) Structure 16: 1817-1827

Released	2008-12-09
Method	X-RAY DIFFRACTION 2 Å
Organisms	Aequorea victoria Rattus norvegicus
Macromolecule	Myosin light chain kinase, Green fluorescent protein, Calmodulin-1 chimera (protein)
Unique Ligands	CA

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3EVU \| pdb_00003evu	Download File View File

Crystal structure of Calcium bound dimeric GCAMP2

Wang, Q., Shui, B., Kotlikoff, M.I., Sondermann, H.

(2008) Structure 16: 1817-1827

Released	2008-12-09
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Aequorea victoria Gallus gallus Rattus norvegicus
Macromolecule	Myosin light chain kinase, Green fluorescent protein, Calmodulin-1 chimera (protein)
Unique Ligands	CA

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3EVV \| pdb_00003evv	Download File View File

Crystal Structure of Calcium bound dimeric GCAMP2 (#2)

Wang, Q., Shui, B., Kotlikoff, M.I., Sondermann, H.

(2008) Structure 16: 1817-1827

Released	2008-12-09
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Aequorea victoria Homo sapiens
Macromolecule	Myosin light chain kinase, Green fluorescent protein, Calmodulin chimera (protein)
Unique Ligands	CA