RCSB PDB: Search

2KQT \| pdb_00002kqt	Download File View File

Solid-state NMR structure of the M2 transmembrane peptide of the influenza A virus in DMPC lipid bilayers bound to deuterated amantadine

Cady, S.D., Schmidt-Rohr, K., Wang, J., Soto, C.S., DeGrado, W.F., Hong, M.

(2010) Nature 463: 689-692

Released	2010-02-09
Method	SOLID-STATE NMR
Organisms	Influenza A virus (strain A/Hong Kong/156/1997 H5N1 genotype Gs/Gd)
Macromolecule	M2 protein (protein)
Unique Ligands	308

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4MMQ \| pdb_00004mmq	Download File View File

Crystal Structure of Prefusion-stabilized RSV F Variant DS

Mclellan, J.S., Joyce, M.G., Stewart-Jones, G.B.E., Sastry, M., Yang, Y., Graham, B.S., Kwong, P.D.

(2013) Science 342: 592-598

Released	2013-11-20
Method	X-RAY DIFFRACTION 3.253 Å
Organisms	Human respiratory syncytial virus A2 Tequatrovirus T4
Macromolecule	Fusion glycoprotein F1 fused with Fibritin trimerization domain (protein) Fusion glycoprotein F2 (protein)
Unique Ligands	SO4

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4MMR \| pdb_00004mmr	Download File View File

Crystal Structure of Prefusion-stabilized RSV F Variant Cav1 at pH 9.5

Stewart-Jones, G.B.E., McLellan, J.S., Joyce, M.G., Sastry, M., Yang, Y., Graham, B.S., Kwong, P.D.

(2013) Science 342: 592-598

Released	2013-11-20
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Human respiratory syncytial virus A2 Tequatrovirus T4
Macromolecule	Fusion glycoprotein F1 fused with Fibritin trimerization domain (protein) Fusion glycoprotein F2 (protein)

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4MMS \| pdb_00004mms	Download File View File

Crystal Structure of Prefusion-stabilized RSV F Variant Cav1 at pH 5.5

Mclellan, J.S., Joyce, M.G., Stewart-Jones, G.B.E., Sastry, M., Yang, Y., Graham, B.S., Kwong, P.D.

(2013) Science 342: 592-598

Released	2013-11-20
Method	X-RAY DIFFRACTION 2.397 Å
Organisms	Human respiratory syncytial virus A2 Tequatrovirus T4
Macromolecule	Fusion glycoprotein F1 fused with Fibritin trimerization domain (protein) Fusion glycoprotein F2 (protein)
Unique Ligands	SO4

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4MMT \| pdb_00004mmt	Download File View File

Crystal Structure of Prefusion-stabilized RSV F Variant DS-Cav1 at pH 9.5

Joyce, M.G., Mclellan, J.S., Stewart-Jones, G.B.E., Sastry, M., Yang, Y., Graham, B.S., Kwong, P.D.

(2013) Science 342: 592-598

Released	2013-11-20
Method	X-RAY DIFFRACTION 3.05 Å
Organisms	Human respiratory syncytial virus A2 Tequatrovirus T4
Macromolecule	Fusion glycoprotein F1 fused with Fibritin trimerization domain (protein) Fusion glycoprotein F2 (protein)

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4MMU \| pdb_00004mmu	Download File View File

Crystal Structure of Prefusion-stabilized RSV F Variant DS-Cav1 at pH 5.5

Joyce, M.G., Mclellan, J.S., Stewart-Jones, G.B.E., Sastry, M., Yang, Y., Graham, B.S., Kwong, P.D.

(2013) Science 342: 592-598

Released	2013-11-20
Method	X-RAY DIFFRACTION 3 Å
Organisms	Human respiratory syncytial virus A2 Tequatrovirus T4
Macromolecule	Fusion glycoprotein F1 fused with Fibritin trimerization domain (protein) Fusion glycoprotein F2 (protein)
Unique Ligands	NAG, PO4, SO4

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4MMV \| pdb_00004mmv	Download File View File

Crystal Structure of Prefusion-stabilized RSV F Variant DS-Cav1-TriC at pH 9.5

Stewart-Jones, G.B.E., McLellan, J.S., Joyce, M.G., Sastry, M., Yang, Y., Graham, B.S., Kwong, P.D.

(2013) Science 342: 592-598

Released	2013-11-20
Method	X-RAY DIFFRACTION 2.81 Å
Organisms	Human respiratory syncytial virus A2 Tequatrovirus T4
Macromolecule	Fusion glycoprotein F1 fused with Fibritin trimerization domain (protein) Fusion glycoprotein F2 (protein)

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4OCR \| pdb_00004ocr	Download File View File

Crystal structure of human Fab CAP256-VRC26.01, a potent V1V2-directed HIV-1 neutralizing antibody

Gorman, J., Doria-Rose, N.A., Schramm, C.A., Moore, P.L., Mascola, J.R., Shapiro, L., Morris, L., Kwong, P.D.

(2014) Nature 509: 55-62

Released	2014-02-26
Method	X-RAY DIFFRACTION 1.895 Å
Organisms	Homo sapiens
Macromolecule	CAP256-VRC26.01 heavy chain (protein) CAP256-VRC26.01 light chain (protein)

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4OCS \| pdb_00004ocs	Download File View File

Crystal structure of human Fab CAP256-VRC26.10, a potent V1V2-directed HIV-1 neutralizing antibody

Gorman, J., Doria-Rose, N.A., Schramm, C.A., Moore, P.L., Mascola, J.R., Shapiro, L., Morris, L., Kwong, P.D.

(2014) Nature 509: 55-62

Released	2014-02-26
Method	X-RAY DIFFRACTION 1.901 Å
Organisms	Homo sapiens
Macromolecule	CAP256-VRC26.10 heavy chain (protein) CAP256-VRC26.10 light chain (protein)

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4OCW \| pdb_00004ocw	Download File View File

Crystal structure of human Fab CAP256-VRC26.06, a potent V1V2-directed HIV-1 neutralizing antibody

Gorman, J., Doria-Rose, N.A., Schramm, C.A., Moore, P.L., Mascola, J.R., Shapiro, L., Morris, L., Kwong, P.D.

(2014) Nature 509: 55-62

Released	2014-02-26
Method	X-RAY DIFFRACTION 3.001 Å
Organisms	Homo sapiens
Macromolecule	CAP256-VRC26.06 heavy chain (protein) CAP256-VRC26.06 light chain (protein)

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4OD1 \| pdb_00004od1	Download File View File

Crystal structure of human Fab CAP256-VRC26.03, a potent V1V2-directed HIV-1 neutralizing antibody

Gorman, J., Doria-Rose, N.A., Schramm, C.A., Moore, P.L., Mascola, J.R., Shapiro, L., Morris, L., Kwong, P.D.

(2014) Nature 509: 55-62

Released	2014-02-26
Method	X-RAY DIFFRACTION 2.69 Å
Organisms	Homo sapiens
Macromolecule	CAP256-VRC26.03 heavy chain (protein) CAP256-VRC26.03 light chain (protein)

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4OD3 \| pdb_00004od3	Download File View File

Crystal structure of human Fab CAP256-VRC26.07, a potent V1V2-directed HIV-1 neutralizing antibody

Gorman, J., Doria-Rose, N.A., Schramm, C.A., Moore, P.L., Mascola, J.R., Shapiro, L., Morris, L., Kwong, P.D.

(2014) Nature 509: 55-62

Released	2014-02-26
Method	X-RAY DIFFRACTION 2.616 Å
Organisms	Homo sapiens
Macromolecule	CAP256-VRC26.07 heavy chain (protein) CAP256-VRC26.07 light chain (protein)
Unique Ligands	MES, ZN

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4ODH \| pdb_00004odh	Download File View File

Crystal structure of human Fab CAP256-VRC26.UCA, a potent V1V2-directed HIV-1 neutralizing antibody

Gorman, J., Doria-Rose, N.A., Schramm, C.A., Moore, P.L., Mascola, J.R., Shapiro, L., Morris, L., Kwong, P.D.

(2014) Nature 509: 55-62

Released	2014-02-26
Method	X-RAY DIFFRACTION 2.894 Å
Organisms	Homo sapiens
Macromolecule	CAP256-VRC26.UCA heavy chain (protein) CAP256-VRC26.UCA light chain (protein)

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4OLU \| pdb_00004olu	Download File View File

Crystal structure of antibody VRC07 in complex with clade A/E 93TH057 HIV-1 gp120 core

Kwon, Y.D., Kwong, P.D.

(2014) J Virol 88: 12669-12682

Released	2014-09-03
Method	X-RAY DIFFRACTION 2.202 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Antigen binding fragment of heavy chain: Antibody VRC01 (protein) Antigen binding fragment of light chain: Antibody VRC01 (protein) Envelope glycoprotein gp160 (protein)
Unique Ligands	NAG

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4OLV \| pdb_00004olv	Download File View File

Crystal structure of antibody VRC07-G54F in complex with clade A/E 93TH057 HIV-1 gp120 core

Kwon, Y.D., Kwong, P.D.

(2014) J Virol 88: 12669-12682

Released	2014-09-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Antigen binding fragment of heavy chain: Antibody VRC01 (protein) Antigen binding fragment of light chain: Antibody VRC01 (protein) Envelope glycoprotein gp160 (protein)
Unique Ligands	NAG

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4OLW \| pdb_00004olw	Download File View File

Crystal structure of antibody VRC07-G54H in complex with clade A/E 93TH057 HIV-1 gp120 core

Kwon, Y.D., Kwong, P.D.

(2014) J Virol 88: 12669-12682

Released	2014-09-03
Method	X-RAY DIFFRACTION 2.709 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Antigen binding fragment of heavy chain: Antibody VRC01 (protein) Antigen binding fragment of light chain: Antibody VRC01 (protein) Envelope glycoprotein gp160 (protein)
Unique Ligands	NAG

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4OLX \| pdb_00004olx	Download File View File

Crystal structure of antibody VRC07-G54L in complex with clade A/E 93TH057 HIV-1 gp120 core

Kwon, Y.D., Kwong, P.D.

(2014) J Virol 88: 12669-12682

Released	2014-09-03
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Antigen binding fragment of heavy chain: Antibody VRC01 (protein) Antigen binding fragment of light chain: Antibody VRC01 (protein) Envelope glycoprotein gp160 (protein)
Unique Ligands	NAG

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4OLY \| pdb_00004oly	Download File View File

Crystal structure of antibody VRC07-G54R in complex with clade A/E 93TH057 HIV-1 gp120 core

Kwon, Y.D., Kwong, P.D.

(2014) J Virol 88: 12669-12682

Released	2014-09-03
Method	X-RAY DIFFRACTION 2.351 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Antigen binding fragment of heavy chain: Antibody VRC01 (protein) Antigen binding fragment of light chain: Antibody VRC01 (protein) Envelope glycoprotein gp160 (protein)
Unique Ligands	NAG

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4OLZ \| pdb_00004olz	Download File View File

Crystal structure of antibody VRC07-G54W in complex with clade A/E 93TH057 HIV-1 gp120 core

Kwon, Y.D., Kwong, P.D.

(2014) J Virol 88: 12669-12682

Released	2014-09-03
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Antigen binding fragment of heavy chain: Antibody VRC01 (protein) Antigen binding fragment of light chain: Antibody VRC01 (protein) Envelope glycoprotein gp160 (protein)
Unique Ligands	NAG

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4OM0 \| pdb_00004om0	Download File View File

Crystal structure of antibody VRC07-G54Y in complex with clade A/E 93TH057 HIV-1 gp120 core

Kwon, Y.D., Kwong, P.D.

(2014) J Virol 88: 12669-12682

Released	2014-09-03
Method	X-RAY DIFFRACTION 2.289 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Antigen binding fragment of heavy chain: Antibody VRC01 (protein) Antigen binding fragment of light chain: Antibody VRC01 (protein) Envelope glycoprotein gp160 (protein)
Unique Ligands	NAG

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4OM1 \| pdb_00004om1	Download File View File

Crystal structure of antibody VRC07-I30Q, G54W, S58N in complex with clade A/E 93TH057 HIV-1 gp120 core

Kwon, Y.D., Kwong, P.D.

(2014) J Virol 88: 12669-12682

Released	2014-09-03
Method	X-RAY DIFFRACTION 2.131 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Antigen binding fragment of heavy chain: Antibody VRC01 (protein) Antigen binding fragment of light chain: Antibody VRC01 (protein) Envelope glycoprotein gp160 (protein)
Unique Ligands	NAG

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4ORG \| pdb_00004org	Download File View File

Crystal structure of human Fab CAP256-VRC26.04, a potent V1V2-directed HIV-1 neutralizing antibody

Gorman, J., Doria-Rose, N.A., Schramm, C.A., Moore, P.L., Mascola, J.R., Shapiro, L., Morris, L., Kwong, P.D.

(2014) Nature 509: 55-62

Released	2014-02-26
Method	X-RAY DIFFRACTION 3.121 Å
Organisms	Homo sapiens
Macromolecule	CAP256-VRC26.04 heavy chain (protein) CAP256-VRC26.04 light chain (protein)

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4RWY \| pdb_00004rwy	Download File View File

Crystal structure of VH1-46 germline-derived CD4-binding site-directed antibody 8ANC131 in complex with HIV-1 clade B YU2 gp120

Acharya, P., Luongo, T.S., Kwong, P.D.

(2015) Cell 161: 1280-1292

Released	2015-07-01
Method	X-RAY DIFFRACTION 2.128 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Antibody 8ANC131 Heavy chain (protein) Antibody 8ANC131 Light chain (protein) HIV-1 YU2 gp120 (protein)
Unique Ligands	EDO, EPE, NA, NAG

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4RX4 \| pdb_00004rx4	Download File View File

Crystal structure of VH1-46 germline-derived CD4-binding site-directed antibody 8ANC134 in complex with HIV-1 clade A Q842.d12 gp120

Zhou, T., Acharya, P., Moquin, S., Kwong, P.D.

(2015) Cell 161: 1280-1292

Released	2015-07-01
Method	X-RAY DIFFRACTION 3.45 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	8ANC134 Heavy chain (protein) 8ANC134 Light Chain (protein) HIV-1 Clade A Q842.d12 gp120 (protein)
Unique Ligands	EDO, NAG, SO4

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4S1Q \| pdb_00004s1q	Download File View File

Crystal structure of a VRC01-lineage antibody, 45-VRC01.H03+06.D-001739, in complex with clade A/E HIV-1 gp120 core

Kwon, Y.D., Yang, Y., Zhang, B., Kwong, P.D.

(2015) Cell 161: 470-485

Released	2015-04-22
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Fab of VRC01 light chain (protein) Fab of VRC01-lineage antibody,45-VRC01.H03+06.D-001739 heavy chain (protein) HIV-1 gp120 core (protein)
Unique Ligands	NAG

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2KQT | pdb_00002kqt

4MMQ | pdb_00004mmq

4MMR | pdb_00004mmr

4MMS | pdb_00004mms

4MMT | pdb_00004mmt

4MMU | pdb_00004mmu

4MMV | pdb_00004mmv

4OCR | pdb_00004ocr

4OCS | pdb_00004ocs

4OCW | pdb_00004ocw

4OD1 | pdb_00004od1

4OD3 | pdb_00004od3

4ODH | pdb_00004odh

4OLU | pdb_00004olu

4OLV | pdb_00004olv

4OLW | pdb_00004olw

4OLX | pdb_00004olx

4OLY | pdb_00004oly

4OLZ | pdb_00004olz

4OM0 | pdb_00004om0

4OM1 | pdb_00004om1

4ORG | pdb_00004org

4RWY | pdb_00004rwy

4RX4 | pdb_00004rx4

4S1Q | pdb_00004s1q