RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Chemical ID(s) = FTR

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Chemical Attributes

Help

NOT

Count

Add Subquery

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 43 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (43)

Scientific Name of Source Organism

	Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (14)
	synthetic construct (7)
	Homo sapiens (6)
	Saccharomyces cerevisiae (3)
	Acetobacter aceti 1023 (2)
	Lactococcus cremoris (2)
	Lactococcus lactis subsp. lactis (2)
	Methylosinus trichosporium OB3b (2)
	Bacillus anthracis (1)
	Lactococcus lactis subsp. lactis Il1403 (1)

More...

Taxonomy

	Bacteria (26)
	Eukaryota (11)
	other sequences (7)

Experimental Method

	X-RAY DIFFRACTION (41)
	SOLUTION NMR (2)

Polymer Entity Type

Protein (43)

Refinement Resolution (Å)

	1.0 - 1.5 (18)
	1.5 - 2.0 (12)
	2.0 - 2.5 (11)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (3)
	2005 - 2009 (3)
	2010 - 2014 (1)
	2015 - 2019 (7)
	2020 - 2024 (28)

Enzyme Classification Name

	Transferases (15)
	Isomerases (8)
	Hydrolases (3)
	Lyases (1)

Symmetry Type

	Cyclic (25)
	Asymmetric (16)
	Dihedral (2)

SCOP Classification

	Alpha and beta proteins (a/b) (24)
	Artifacts (4)
	All alpha proteins (4)
	All beta proteins (3)
	Alpha and beta proteins (a+b) (2)
	Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 25 of 43 Polymer Entities

Page 1 of 2

Sort by

Explore in 3D

1I45: Entity 1	Download File View File

YEAST TRIOSEPHOSPHATE ISOMERASE (MUTANT)

Rozovsky, S., Jogl, G., Tong, L., McDermott, A.E.

(2001) J Mol Biology 310: 271-280

Released	2001-06-30
Method	X-RAY DIFFRACTION 1.8 Å
Chain IDs	A, B
Organism	Saccharomyces cerevisiae
Macromolecule	TRIOSEPHOSPHATE ISOMERASE

Explore in 3D

1NEY: Entity 1	Download File View File

Triosephosphate Isomerase in Complex with DHAP

Jogl, G., Rozovsky, S., McDermott, A.E., Tong, L.

(2003) Proc Natl Acad Sci U S A 100: 50-55

Released	2003-01-07
Method	X-RAY DIFFRACTION 1.2 Å
Chain IDs	A, B
Organism	Saccharomyces cerevisiae
Macromolecule	triosephosphate isomerase

Explore in 3D

1NF0: Entity 1	Download File View File

Triosephosphate Isomerase in Complex with DHAP

Jogl, G., Rozovsky, S., McDermott, A.E., Tong, L.

(2003) Proc Natl Acad Sci U S A 100: 50-55

Released	2003-01-07
Method	X-RAY DIFFRACTION 1.6 Å
Chain IDs	A, B
Organism	Saccharomyces cerevisiae
Macromolecule	triosephosphate isomerase

Explore in 3D

2JT8: Entity 1	Download File View File

Solution structure of the F153-to-5-flurotryptophan mutant of human cardiac troponin C

Wang, X., Mercier, P., Letourneau, P., Sykes, B.D.

(2005) Protein Sci 14: 2447-2460

Released	2007-08-07
Method	SOLUTION NMR
Chain ID	A
Organism	Homo sapiens
Macromolecule	Troponin C, slow skeletal and cardiac muscles

Explore in 3D

2JTZ: Entity 1	Download File View File

Solution structure and chemical shift assignments of the F104-to-5-flurotryptophan mutant of cardiac troponin C

Wang, X., Mercier, P., Letourneau, P., Sykes, B.D.

(2005) Protein Sci 14: 2447-2460

Released	2007-08-28
Method	SOLUTION NMR
Chain ID	A
Organism	Homo sapiens
Macromolecule	Troponin C, slow skeletal and cardiac muscles

Explore in 3D

2ZNX: Entity 1	Download File View File

5-Fluorotryptophan Incorporated ScFv10 Complexed to Hen Egg Lysozyme

DeSantis, M.E., Acchione, M., Li, M., Walter, R.L., Wlodawer, A., Smith-Gill, S.

(2012) Biochemistry 51: 6017-6027

Released	2009-01-27
Method	X-RAY DIFFRACTION 2.3 Å
Chain IDs	A, C [auth B]
Organism	Mus musculus synthetic construct
Macromolecule	ScFv

Explore in 3D

4NAM: Entity 1	Download File View File

1.7A structure of 5-Fluoro Tryptophan Labeled Protective Antigen (W206Y)

Lovell, S., Battaile, K.P., Chadegani, F., Mulangi, V., Miyagi, M., Bann, J.G.

(2014) Biochemistry 53: 690-701

Released	2014-01-22
Method	X-RAY DIFFRACTION 1.7 Å
Chain ID	A
Organism	Bacillus anthracis
Macromolecule	Protective antigen

Explore in 3D

5CTJ: Entity 1	Download File View File

Structure of a single tryptophan mutant of Acetobacter aceti PurE containing 5-fluorotryptophan

Sullivan, K.L., Kappock, T.J.

To be published

Released	2016-08-03
Method	X-RAY DIFFRACTION 1.928 Å
Chain IDs	A, B
Organism	Acetobacter aceti 1023
Macromolecule	N5-carboxyaminoimidazole ribonucleotide mutase

Explore in 3D

5CVT: Entity 1	Download File View File

Structure of a single tryptophan mutant of Acetobacter aceti PurE containing 5-fluorotryptophan, pH 5.4

Sullivan, K.L., Kappock, T.J.

To be published

Released	2016-08-10
Method	X-RAY DIFFRACTION 1.78 Å
Chain IDs	A, B
Organism	Acetobacter aceti 1023
Macromolecule	N5-carboxyaminoimidazole ribonucleotide mutase

Explore in 3D

5FWG: Entity 1	Download File View File

TETRA-(5-FLUOROTRYPTOPHANYL)-GLUTATHIONE TRANSFERASE

Parsons, J.F., Xiao, G., Armstrong, R.N., Gilliland, G.L.

(1998) Biochemistry 37: 6286-6294

Released	1999-01-27
Method	X-RAY DIFFRACTION 2 Å
Chain IDs	A, B
Organism	Rattus norvegicus
Macromolecule	TETRA-(5-FLUOROTRYPTOPHANYL)-GLUTATHIONE TRANSFERASE MU CLASS

Explore in 3D

5K3C: Entity 1	Download File View File

Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - WT/5-Fluorotryptophan

Mehrabi, P., Kim, T.H., Prosser, S.R., Pai, E.F.

(2017) Science 355:

Released	2017-02-01
Method	X-RAY DIFFRACTION 1.541 Å
Chain IDs	A, B
Organism	Rhodopseudomonas palustris CGA009
Macromolecule	Fluoroacetate dehalogenase

Explore in 3D

5O7V: Entity 1	Download File View File

Crystal structure of the 5F-tryptophan RSL lectin in complex with Lewis x tetrasaccharide

Varrot, A.

(2018) ACS Chem Biol 13: 2211-2219

Released	2018-06-06
Method	X-RAY DIFFRACTION 1.28 Å
Chain IDs	A, B
Organism	Ralstonia solanacearum
Macromolecule	Fucose-binding lectin protein

Explore in 3D

5OLW: Entity 1	Download File View File

5-fluorotryptophan labeled beta-phosphoglucomutase in an open conformation

Bowler, M.W., von Velsen, J.

(2017) Chem Sci 8: 8427-8434

Released	2017-11-01
Method	X-RAY DIFFRACTION 2.28 Å
Chain IDs	A, B
Organism	Lactococcus lactis subsp. lactis Il1403
Macromolecule	Beta-phosphoglucomutase

Explore in 3D

5OLX: Entity 1	Download File View File

5-fluorotryptophan labeled beta-phosphoglucomutase in a closed conformation, orthorhomic crystal form

Bowler, M.W., von Velsen, J.

(2017) Chem Sci 8: 8427-8434

Released	2017-11-01
Method	X-RAY DIFFRACTION 1.38 Å
Chain ID	A
Organism	Lactococcus lactis subsp. lactis
Macromolecule	Beta-phosphoglucomutase

Explore in 3D

5OLY: Entity 1	Download File View File

5-fluorotryptophan labeled beta-phosphoglucomutase in a closed conformation, monoclinic crystal form

Bowler, M.W., von Velsen, J.

(2017) Chem Sci 8: 8427-8434

Released	2017-11-01
Method	X-RAY DIFFRACTION 2 Å
Chain IDs	A, B [auth G]
Organism	Lactococcus lactis subsp. lactis
Macromolecule	Beta-phosphoglucomutase

Explore in 3D

6V5T: Entity 1	Download File View File

Crystal structure of human prethrombin-2 with tryptophans replaced by 5-F-tryptophan

Ruben, E.A., Chen, Z., Di Cera, E.

(2020) J Biological Chem 295: 8227-8235

Released	2020-05-13
Method	X-RAY DIFFRACTION 2.1 Å
Chain ID	A [auth E]
Organism	Homo sapiens
Macromolecule	Prothrombin

Explore in 3D

6V64: Entity 2	Download File View File

Crystal structure of human thrombin bound to ppack with tryptophans replaced by 5-F-tryptophan

Ruben, E.A., Chen, Z., Di Cera, E.

(2020) J Biological Chem 295: 8227-8235

Released	2020-05-13
Method	X-RAY DIFFRACTION 2.29 Å
Chain ID	B
Organism	Homo sapiens
Macromolecule	Thrombin heavy chain

Explore in 3D

6XIB: Entity 3	Download File View File

PCSK9(deltaCRD) in complex with cyclic peptide 30

Orth, P.

(2020) J Med Chem 63: 13796-13824

Released	2020-11-18
Method	X-RAY DIFFRACTION 1.546 Å
Chain ID	C [auth I]
Organism	synthetic construct
Macromolecule	Peptide 30

Explore in 3D

6XIC: Entity 3	Download File View File

PCSK9(deltaCRD) in complex with cyclic peptide 40

Orth, P.

(2020) J Med Chem 63: 13796-13824

Released	2020-11-18
Method	X-RAY DIFFRACTION 1.377 Å
Chain ID	C [auth I]
Organism	synthetic construct
Macromolecule	Peptide 40

Explore in 3D

6XID: Entity 3	Download File View File

PCSK9(deltaCRD) in complex with cyclic peptide 51

Orth, P.

(2020) J Med Chem 63: 13796-13824

Released	2020-11-18
Method	X-RAY DIFFRACTION 1.482 Å
Chain ID	C [auth I]
Organism	synthetic construct
Macromolecule	Peptide 51

Explore in 3D

6XIE: Entity 3	Download File View File

PCSK9(deltaCRD) in complex with cyclic peptide 77

Orth, P.

(2020) J Med Chem 63: 13796-13824

Released	2020-11-18
Method	X-RAY DIFFRACTION 1.43 Å
Chain ID	C [auth I]
Organism	synthetic construct
Macromolecule	Peptide 77

Explore in 3D

6YGL: Entity 1	Download File View File

TGT W326F mutant labelled mit 5F-Trp crystallised at pH 5.5

Nguyen, A., Heine, A., Klebe, G.

To be published

Released	2020-04-08
Method	X-RAY DIFFRACTION 1.48 Å
Chain ID	A
Organism	Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Macromolecule	Queuine tRNA-ribosyltransferase

Explore in 3D

6YGM: Entity 1	Download File View File

TGT W95F mutant labelled mit 5F-Trp crystallised at pH 5.5

Nguyen, A., Heine, A., Klebe, G.

To be published

Released	2020-04-08
Method	X-RAY DIFFRACTION 1.23 Å
Chain ID	A
Organism	Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Macromolecule	Queuine tRNA-ribosyltransferase

Explore in 3D

6YGO: Entity 1	Download File View File

TGT W95F mutant labelled mit 5F-Trp crystallised at pH 8.5

Nguyen, A., Heine, A., Klebe, G.

To be published

Released	2020-04-08
Method	X-RAY DIFFRACTION 1.26 Å
Chain ID	A
Organism	Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Macromolecule	Queuine tRNA-ribosyltransferase

Explore in 3D

6YGP: Entity 1	Download File View File

TGT WT labelled mit 5F-Trp crystallised at pH 5.5

Nguyen, A., Heine, A., Klebe, G.

To be published

Released	2020-04-08
Method	X-RAY DIFFRACTION 1.33 Å
Chain ID	A
Organism	Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Macromolecule	Queuine tRNA-ribosyltransferase