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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Chemical ID(s) = NHE

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Search Summary

This query matches 285 Structures.

Refinements

Structure Determination Methodology

experimental (285)

Scientific Name of Source Organism

	Homo sapiens (48)
	Rattus norvegicus (40)
	Arabidopsis thaliana (21)
	human respiratory syncytial virus (13)
	metagenomes (9)
	synthetic construct (9)
	Human respiratory syncytial virus A2 (8)
	Pseudomonas aeruginosa PAO1 (6)
	Pyrococcus furiosus (6)
	Mycolicibacterium thermoresistibile (5)

More...

Taxonomy

	Eukaryota (134)
	Bacteria (94)
	Riboviria (32)
	Archaea (10)
	other sequences (9)
	unclassified sequences (9)
	Duplodnaviria (6)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (285)
	NEUTRON DIFFRACTION (1)

Polymer Entity Type

	Protein (285)
	RNA (2)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (56)
	1.5 - 2.0 (98)
	2.0 - 2.5 (66)
	2.5 - 3.0 (52)
	3.0 - 3.5 (11)

Release Date

	2000 - 2004 (8)
	2005 - 2009 (33)
	2010 - 2014 (53)
	2015 - 2019 (125)
	2020 - 2024 (63)
	2025 - 2029 (3)

Enzyme Classification Name

	Transferases (97)
	Hydrolases (57)
	Oxidoreductases (12)
	Lyases (6)
	Ligases (2)
	Isomerases (1)

Symmetry Type

	Asymmetric (176)
	Cyclic (94)
	Dihedral (32)
	Tetrahedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (87)
	All beta proteins (30)
	Artifacts (18)
	Alpha and beta proteins (a+b) (15)
	All alpha proteins (14)
	Small proteins (7)
	Coiled coil proteins (2)
	Multi-domain proteins (alpha and beta) (2)

AllSelected

1 to 25 of 285 Structures

Page 1 of 12

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1H9X \| pdb_00001h9x	Download File View File

Cytochrome cd1 Nitrite Reductase, reduced form

Sjogren, T., Hajdu, J.

(2001) J Biological Chem 276: 29450

Released	2001-08-09
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Paracoccus pantotrophus
Macromolecule	CYTOCHROME CD1 NITRITE REDUCTASE (protein)
Unique Ligands	DHE, HEC, NHE, SO4

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1L5B \| pdb_00001l5b	Download File View File

DOMAIN-SWAPPED CYANOVIRIN-N DIMER

Barrientos, L.G., Louis, J.M., Botos, I., Mori, T., Han, Z., O'Keefe, B.R., Boyd, M.R., Wlodawer, A., Gronenborn, A.M.

(2002) Structure 10: 673-686

Released	2002-05-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Nostoc ellipsosporum
Macromolecule	cyanovirin-N (protein)
Unique Ligands	NA, NHE

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1OKS \| pdb_00001oks	Download File View File

Crystal structure of the measles virus phosphoprotein XD domain

Johansson, K., Bourhis, J.-M., Campanacci, V., Cambillau, C., Canard, B., Longhi, S.

(2003) J Biological Chem 278: 44567

Released	2003-09-01
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Measles morbillivirus
Macromolecule	RNA POLYMERASE ALPHA SUBUNIT (protein)
Unique Ligands	NHE

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1P7I \| pdb_00001p7i	Download File View File

CRYSTAL STRUCTURE OF ENGRAILED HOMEODOMAIN MUTANT K52A

Stollar, E.J., Mayor, U., Lovell, S.C., Federici, L., Freund, S.M., Fersht, A.R., Luisi, B.F.

(2003) J Biological Chem 278: 43699-43708

Released	2003-10-14
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Drosophila melanogaster
Macromolecule	Segmentation polarity homeobox protein engrailed (protein)
Unique Ligands	NHE

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1P7J \| pdb_00001p7j	Download File View File

Crystal structure of engrailed homeodomain mutant K52E

Stollar, E.J., Mayor, U., Lovell, S.C., Federici, L., Freund, S.M., Fersht, A.R., Luisi, B.F.

(2003) J Biological Chem 278: 43699-43708

Released	2003-10-14
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Drosophila melanogaster
Macromolecule	Segmentation polarity homeobox protein engrailed (protein)
Unique Ligands	NHE

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1Q1Q \| pdb_00001q1q	Download File View File

Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP

Lee, K.A., Fuda, H., Lee, Y.C., Negishi, M., Strott, C.A., Pedersen, L.C.

(2003) J Biological Chem 278: 44593-44599

Released	2003-11-11
Method	X-RAY DIFFRACTION 2.91 Å
Organisms	Homo sapiens
Macromolecule	sulfotransferase family, cytosolic, 2B, member 1 isoform a (protein)
Unique Ligands	A3P, NA, NHE

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1R6L \| pdb_00001r6l	Download File View File

Crystal Structure Of The tRNA Processing Enzyme Rnase pH From Pseudomonas Aeruginosa

Choi, J.M., Park, E.Y., Kim, J.H., Chang, S.K., Cho, Y.

(2004) J Biological Chem 279: 755-764

Released	2004-02-17
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Ribonuclease PH (protein)
Unique Ligands	NHE, SO4

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1V30 \| pdb_00001v30	Download File View File

Crystal Structure Of Uncharacterized Protein PH0828 From Pyrococcus horikoshii

Tajika, Y., Sakai, N., Yao, M., Watanabe, N., Tanaka, I.

(2004) Proteins 57: 862-865

Released	2004-11-09
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Pyrococcus horikoshii
Macromolecule	Hypothetical UPF0131 protein PH0828 (protein)
Unique Ligands	NHE

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1YBH \| pdb_00001ybh	Download File View File

Crystal structure of Arabidopsis thaliana Acetohydroxyacid synthase In Complex With A Sulfonylurea Herbicide Chlorimuron Ethyl

McCourt, J.A., Pang, S.S., King-Scott, J., Guddat, L.W., Duggleby, R.G.

(2006) Proc Natl Acad Sci U S A 103: 569-573

Released	2006-01-10
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Arabidopsis thaliana
Macromolecule	Acetolactate synthase, chloroplast (protein)
Unique Ligands	CIE, FAD, MG, NHE, P22

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1YHY \| pdb_00001yhy	Download File View File

Crystal structure of Arabidopsis thaliana Acetohydroxyacid synthase In Complex With A Sulfonylurea Herbicide, Metsulfuron methyl

McCourt, J.A., Pang, S.S., King-Scott, J., Guddat, L.W., Duggleby, R.G.

(2006) Proc Natl Acad Sci U S A 103: 569-573

Released	2006-01-17
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Arabidopsis thaliana
Macromolecule	Acetolactate synthase (protein)
Unique Ligands	1MM, FAD, MG, NHE, P22

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1YHZ \| pdb_00001yhz	Download File View File

Crystal structure of Arabidopsis thaliana Acetohydroxyacid synthase In Complex With A Sulfonylurea Herbicide, Chlorsulfuron

McCourt, J.A., Pang, S.S., King-Scott, J., Guddat, L.W., Duggleby, R.G.

(2006) Proc Natl Acad Sci U S A 103: 569-573

Released	2006-01-17
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Arabidopsis thaliana
Macromolecule	Acetolactate synthase (protein)
Unique Ligands	1CS, FAD, MG, NHE, P22

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1YI0 \| pdb_00001yi0	Download File View File

Crystal structure of Arabidopsis thaliana Acetohydroxyacid synthase In Complex With A Sulfonylurea Herbicide, Sulfometuron methyl

McCourt, J.A., Pang, S.S., King-Scott, J., Guddat, L.W., Duggleby, R.G.

(2006) Proc Natl Acad Sci U S A 103: 569-573

Released	2006-01-17
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Arabidopsis thaliana
Macromolecule	Acetolactate synthase (protein)
Unique Ligands	1SM, FAD, MG, NHE, P22

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1YI1 \| pdb_00001yi1	Download File View File

Crystal structure of Arabidopsis thaliana Acetohydroxyacid synthase In Complex With A Sulfonylurea Herbicide, Tribenuron methyl

McCourt, J.A., Pang, S.S., King-Scott, J., Guddat, L.W., Duggleby, R.G.

(2006) Proc Natl Acad Sci U S A 103: 569-573

Released	2006-01-17
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Arabidopsis thaliana
Macromolecule	Acetolactate synthase (protein)
Unique Ligands	1TB, FAD, MG, NHE, P22

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1Z8N \| pdb_00001z8n	Download File View File

Crystal structure of Arabidopsis thaliana Acetohydroxyacid synthase In Complex With An Imidazolinone Herbicide, Imazaquin

McCourt, J.A., Pang, S.S., King-Scott, J., Guddat, L.W., Duggleby, R.G.

(2006) Proc Natl Acad Sci U S A 103: 569-573

Released	2006-01-17
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Arabidopsis thaliana
Macromolecule	Acetolactate synthase (protein)
Unique Ligands	1IQ, FAD, MG, NHE, TPP

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1ZHH \| pdb_00001zhh	Download File View File

Crystal Structure of the Apo Form of Vibrio Harveyi LUXP Complexed with the Periplasmic Domain of LUXQ

Neiditch, M.B., Federle, M.J., Miller, S.T., Bassler, B.L., Hughson, F.M.

(2005) Mol Cell 18: 507-518

Released	2005-05-24
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Vibrio harveyi
Macromolecule	Autoinducer 2 sensor kinase/phosphatase luxQ (protein) Autoinducer 2-binding periplasmic protein luxP (protein)
Unique Ligands	NHE

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2CUK \| pdb_00002cuk	Download File View File

Crystal structure of TT0316 protein from Thermus thermophilus HB8

Lokanath, N.K., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2006-08-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thermus thermophilus HB8
Macromolecule	glycerate dehydrogenase/glyoxylate reductase (protein)
Unique Ligands	NHE

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2D0T \| pdb_00002d0t	Download File View File

Crystal structure of 4-phenylimidazole bound form of human indoleamine 2,3-dioxygenase

Sugimoto, H., Oda, S., Otsuki, T., Hino, T., Yoshida, T., Shiro, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2006) Proc Natl Acad Sci U S A 103: 2611-2616

Released	2006-01-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Indoleamine 2,3-dioxygenase (protein)
Unique Ligands	HEM, NHE, PIM

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2D0U \| pdb_00002d0u	Download File View File

Crystal structure of cyanide bound form of human indoleamine 2,3-dioxygenase

Sugimoto, H., Oda, S., Otsuki, T., Hino, T., Yoshida, T., Shiro, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2006) Proc Natl Acad Sci U S A 103: 2611-2616

Released	2006-01-31
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Homo sapiens
Macromolecule	Indoleamine 2,3-dioxygenase (protein)
Unique Ligands	CYN, HEM, NHE

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2DSY \| pdb_00002dsy	Download File View File

Crystal structure of TTHA0281 from thermus thermophilus HB8

Okazaki, N., Kumei, M., Shinkai, A., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2007) Acta Crystallogr Sect F Struct Biol Cryst Commun 63: 173-177

Released	2007-03-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thermus thermophilus
Macromolecule	Hypothetical protein TTHA0281 (protein)
Unique Ligands	MG, NHE

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2ICH \| pdb_00002ich	Download File View File

CRYSTAL STRUCTURE OF A PUTATIVE ATTH (NE1406) FROM NITROSOMONAS EUROPAEA AT 2.00 A RESOLUTION

Joint Center for Structural Genomics (JCSG)

(2010) Acta Crystallogr Sect F Struct Biol Cryst Commun 66: 1153-1159

Released	2006-10-03
Method	X-RAY DIFFRACTION 2 Å
Organisms	Nitrosomonas europaea
Macromolecule	Putative AttH (protein)
Unique Ligands	GOL, NHE, SO4

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2ITE \| pdb_00002ite	Download File View File

Crystal structure of the IsdA NEAT domain from Staphylococcus aureus

Grigg, J.C., Vermeiren, C.L., Heinrichs, D.E., Murphy, M.E.

(2007) Mol Microbiol 63: 139-149

Released	2006-12-26
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Staphylococcus aureus
Macromolecule	Iron-regulated surface determinant protein A (protein)
Unique Ligands	NHE

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2QVN \| pdb_00002qvn	Download File View File

Crystal structure of adenosine deaminase from Plasmodium vivax in complex with guanosine

Larson, E.T., Merritt, E.A., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

(2008) J Mol Biology 381: 975-988

Released	2007-09-04
Method	X-RAY DIFFRACTION 2.19 Å
Organisms	Plasmodium vivax Sal-1
Macromolecule	Adenosine deaminase (protein)
Unique Ligands	GMP, NHE

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2VSY \| pdb_00002vsy	Download File View File

Xanthomonas campestris putative OGT (XCC0866), apostructure

Schuettelkopf, A.W., Clarke, A.J., van Aalten, D.M.F.

(2008) EMBO J 27: 2780

Released	2008-11-18
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Xanthomonas campestris pv. campestris str. ATCC 33913
Macromolecule	XCC0866 (protein)
Unique Ligands	CL, NHE, PEG, PR