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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Expression Organism = "Lactococcus cremoris subsp. cremoris NZ9000"

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This query matches 17 Structures.

Refinements

Structure Determination Methodology

experimental (17)

Scientific Name of Source Organism

	Lactococcus cremoris subsp. cremoris NZ9000 (5)
	Homo sapiens (3)
	Halalkalibacterium halodurans C-125 (2)
	Lacticaseibacillus rhamnosus HN001 (2)
	Lactococcus cremoris subsp. cremoris MG1363 (2)
	Bacillus cereus ATCC 10987 (1)
	Bacillus cereus ATCC 14579 (1)
	Lactococcus lactis (1)

Taxonomy

	Bacteria (14)
	Eukaryota (3)

Experimental Method

X-RAY DIFFRACTION (17)

Polymer Entity Type

Protein (17)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.0 - 2.5 (10)
	2.5 - 3.0 (4)

Release Date

	2010 - 2014 (15)
	2015 - 2019 (1)
	2020 - 2024 (1)

Enzyme Classification Name

	Isomerases (1)
	Hydrolases (2)

Membrane Protein Annotation

	MemProtMD (3)
	PDBTM (3)
	mpstruc (3)
	OPM (2)

Symmetry Type

	Asymmetric (10)
	Cyclic (8)
	Dihedral (1)

SCOP Classification

	All alpha proteins (3)
	Artifacts (2)
	Alpha and beta proteins (a/b) (1)
	Alpha and beta proteins (a+b) (1)

AllSelected

1 to 17 of 17 Structures

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3RLB \| pdb_00003rlb	Download File View File

Crystal structure at 2.0 A of the S-component for thiamin from an ECF-type ABC transporter

Erkens, G.B., Berntsson, R.P.-A., Fulyani, F., Majsnerowska, M., Vujicic-Zagar, A., ter Beek, J., Poolman, B., Slotboom, D.J.

(2011) Nat Struct Mol Biol 18: 755-760

Released	2011-06-29
Method	X-RAY DIFFRACTION 2 Å
Organisms	Lactococcus cremoris subsp. cremoris NZ9000
Macromolecule	ThiT (protein)
Unique Ligands	BNG, VIB

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4BND \| pdb_00004bnd	Download File View File

Structure of an atypical alpha-phosphoglucomutase similar to eukaryotic phosphomannomutases

Nogly, P., Matias, P.M., De Rosa, M., Castro, R., Santos, H., Neves, A.R., Archer, M.

(2013) Acta Crystallogr D Biol Crystallogr 69: 2008

Released	2013-10-02
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Lactococcus cremoris subsp. cremoris MG1363
Macromolecule	ALPHA-PHOSPHOGLUCOMUTASE (protein)
Unique Ligands	GOL, SO4

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4ESB \| pdb_00004esb	Download File View File

Crystal structure of PadR-like transcriptional regulator (BC4206) from Bacillus cereus strain ATCC 14579

Fibriansah, G., Kovacs, A.T., Kuipers, O.P., Thunnissen, A.M.W.H.

(2012) PLoS One 7: e48015-e48015

Released	2012-12-05
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bacillus cereus ATCC 14579
Macromolecule	Transcriptional regulator, PadR family (protein)
Unique Ligands	GOL, SO4

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4ESF \| pdb_00004esf	Download File View File

Crystal structure of PadR-like transcriptional regulator (BCE3449) from Bacillus cereus strain ATCC 10987

Fibriansah, G., Kovacs, A.T., Kuipers, O.P., Thunnissen, A.M.W.H.

(2012) PLoS One 7: e48015-e48015

Released	2012-12-05
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bacillus cereus ATCC 10987
Macromolecule	PadR-like transcriptional regulator (protein)

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4IUW \| pdb_00004iuw	Download File View File

Crystal structure of PEPO from Lactobacillus rhamnosis HN001 (DR20)

Anderson, B.F., Knapp, K.M., Holland, R., Norris, G.E., Christensson, C., Bratt, H., Collins, L.J., Coolbear, T., Lubbers, M.W., Toole, P.W.O., Reid, J.R., Jameson, G.B.

To be published

Released	2013-03-20
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Lacticaseibacillus rhamnosus HN001
Macromolecule	Neutral endopeptidase (protein)
Unique Ligands	CIT, CO3, NA, OXD, SO4, ZN

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4K7C \| pdb_00004k7c	Download File View File

Crystal structure of pepw from lactobacillus rhamnosis hn001 (dr20) determined as the selenomet derivative

Webby, C., Knapp, K.M., Anderson, B.F., Norris, G.E.

To be published

Released	2013-06-19
Method	X-RAY DIFFRACTION 1.66 Å
Organisms	Lacticaseibacillus rhamnosus HN001
Macromolecule	Aminopeptidase C (protein)
Unique Ligands	GOL

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4MES \| pdb_00004mes	Download File View File

Crystal structure of ThiT complexed with LMG116

Swier, L.J.Y.M., Guskov, A., Slotboom, D.J.

To be published

Released	2014-08-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Lactococcus cremoris subsp. cremoris NZ9000
Macromolecule	Thiamine transporter ThiT (protein)
Unique Ligands	1PE, 26G, BNG, P6G, PEG, PG0, PG4

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4MHW \| pdb_00004mhw	Download File View File

Crystal structure of ThiT with small molecule BAT-25

Swier, L.J.Y.M., Guskov, A., Slotboom, D.J.

To be published

Released	2014-09-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Lactococcus cremoris subsp. cremoris NZ9000
Macromolecule	Thiamine transporter ThiT (protein)
Unique Ligands	0YN, 1PE, BNG, P6G, PE4, PEG, PG0, PG4

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4MUU \| pdb_00004muu	Download File View File

Structure of ThiT with pyrithiamine bound

Swier, L.J.Y.M., Guskov, A., Slotboom, D.J.

To be published

Released	2014-09-17
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Lactococcus cremoris subsp. cremoris NZ9000
Macromolecule	Thiamine transporter ThiT (protein)
Unique Ligands	1PE, 218, BNG, P6G, PE5, PEG, PG0, PG4, PGE

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4N4D \| pdb_00004n4d	Download File View File

Structure of ThiT with AV-38 bound

Swier, L.J.Y.M., Guskov, A., Slotboom, D.J.

To be published

Released	2014-09-17
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Lactococcus cremoris subsp. cremoris NZ9000
Macromolecule	thiamine binding protein ThiT (protein)
Unique Ligands	1PE, BNG, CL, P33, PEG, PG0, PG4, PGE, XX8

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4P5W \| pdb_00004p5w	Download File View File

Structure of the N- and C-terminal domain fusion of the human mitochondrial aspartate/glutamate carrier Citrin in the calcium-bound state

Thangaratnarajah, C., Ruprecht, J.J., Kunji, E.R.S.

(2014) Nat Commun 5: 5491-5491

Released	2014-11-26
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Calcium-binding mitochondrial carrier protein Aralar2,Calcium-binding mitochondrial carrier protein Aralar2 (protein)
Unique Ligands	CA

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4P5X \| pdb_00004p5x	Download File View File

Structure of the N-terminal domain of the human mitochondrial aspartate/glutamate carrier Aralar in the calcium-bound state

Thangaratnarajah, C., Ruprecht, J.J., Kunji, E.R.S.

(2014) Nat Commun 5: 5491-5491

Released	2014-11-26
Method	X-RAY DIFFRACTION 2.261 Å
Organisms	Homo sapiens
Macromolecule	Calcium-binding mitochondrial carrier protein Aralar1 (protein)
Unique Ligands	CA

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4P60 \| pdb_00004p60	Download File View File

Structure of the N-terminal domain of the human mitochondrial aspartate/glutamate carrier Aralar in the apo state

Thangaratnarajah, C., Ruprecht, J.J., Kunji, E.R.S.

(2014) Nat Commun 5: 5491-5491

Released	2014-11-26
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Calcium-binding mitochondrial carrier protein Aralar1 (protein)
Unique Ligands	NA

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4US3 \| pdb_00004us3	Download File View File

Crystal Structure of the bacterial NSS member MhsT in an Occluded Inward-Facing State

Malinauskaite, L., Quick, M., Reinhard, L., Lyons, J.A., Yano, H., Javitch, J.A., Nissen, P.

(2014) Nat Struct Mol Biol 21: 1006

Released	2014-09-24
Method	X-RAY DIFFRACTION 2.098 Å
Organisms	Halalkalibacterium halodurans C-125
Macromolecule	TRANSPORTER (protein)
Unique Ligands	BNG, LMU, NA, TRP

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4US4 \| pdb_00004us4	Download File View File

Crystal Structure of the Bacterial NSS Member MhsT in an Occluded Inward-Facing State (lipidic cubic phase form)

Malinauskaite, L., Quick, M., Reinhard, L., Lyons, J.A., Yano, H., Javitch, J.A., Nissen, P.

(2014) Nat Struct Mol Biol 21: 1006

Released	2014-09-24
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Halalkalibacterium halodurans C-125
Macromolecule	TRANSPORTER (protein)
Unique Ligands	78M, 78N, NA, TRP

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4ZZD \| pdb_00004zzd	Download File View File

CRYSTAL STRUCTURE OF MULTIDRUG RESISTANCE REGULATOR LMRR BOUND TO RIBOFLAVIN

Madoori, P.K., Thunnissen, A.-M.W.H.

(2015) PLoS One 10: e0135467-e0135467

Released	2015-08-26
Method	X-RAY DIFFRACTION 2.351 Å
Organisms	Lactococcus cremoris subsp. cremoris MG1363
Macromolecule	TRANSCRIPTIONAL REGULATOR, PADR-LIKE FAMILY (protein)
Unique Ligands	RBF

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6T1Z \| pdb_00006t1z	Download File View File

LmrP from L. lactis, in an outward-open conformation, bound to Hoechst 33342

Hutchin, A., Debruycker, V., Masureel, M., Legrand, P., Remaut, H., Govaerts, C.

(2020) Nat Struct Mol Biol 27: 829-835

Released	2020-07-29
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Lactococcus lactis
Macromolecule	LmrP integral membrane protein (protein)
Unique Ligands	GOL, HT1, LMU, XP4

1 to 17 of 17 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3RLB | pdb_00003rlb

Crystal structure at 2.0 A of the S-component for thiamin from an ECF-type ABC transporter

4BND | pdb_00004bnd

Structure of an atypical alpha-phosphoglucomutase similar to eukaryotic phosphomannomutases

4ESB | pdb_00004esb

Crystal structure of PadR-like transcriptional regulator (BC4206) from Bacillus cereus strain ATCC 14579

4ESF | pdb_00004esf

Crystal structure of PadR-like transcriptional regulator (BCE3449) from Bacillus cereus strain ATCC 10987

4IUW | pdb_00004iuw

Crystal structure of PEPO from Lactobacillus rhamnosis HN001 (DR20)

4K7C | pdb_00004k7c

Crystal structure of pepw from lactobacillus rhamnosis hn001 (dr20) determined as the selenomet derivative

4MES | pdb_00004mes

Crystal structure of ThiT complexed with LMG116

4MHW | pdb_00004mhw

Crystal structure of ThiT with small molecule BAT-25

4MUU | pdb_00004muu

Structure of ThiT with pyrithiamine bound

4N4D | pdb_00004n4d

Structure of ThiT with AV-38 bound

4P5W | pdb_00004p5w

Structure of the N- and C-terminal domain fusion of the human mitochondrial aspartate/glutamate carrier Citrin in the calcium-bound state

4P5X | pdb_00004p5x

Structure of the N-terminal domain of the human mitochondrial aspartate/glutamate carrier Aralar in the calcium-bound state

4P60 | pdb_00004p60

Structure of the N-terminal domain of the human mitochondrial aspartate/glutamate carrier Aralar in the apo state

4US3 | pdb_00004us3

Crystal Structure of the bacterial NSS member MhsT in an Occluded Inward-Facing State

4US4 | pdb_00004us4

Crystal Structure of the Bacterial NSS Member MhsT in an Occluded Inward-Facing State (lipidic cubic phase form)

4ZZD | pdb_00004zzd

CRYSTAL STRUCTURE OF MULTIDRUG RESISTANCE REGULATOR LMRR BOUND TO RIBOFLAVIN

6T1Z | pdb_00006t1z

LmrP from L. lactis, in an outward-open conformation, bound to Hoechst 33342

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

3RLB | pdb_00003rlb

4BND | pdb_00004bnd

4ESB | pdb_00004esb

4ESF | pdb_00004esf

4IUW | pdb_00004iuw

4K7C | pdb_00004k7c

4MES | pdb_00004mes

4MHW | pdb_00004mhw

4MUU | pdb_00004muu

4N4D | pdb_00004n4d

4P5W | pdb_00004p5w

4P5X | pdb_00004p5x

4P60 | pdb_00004p60

4US3 | pdb_00004us3

4US4 | pdb_00004us4

4ZZD | pdb_00004zzd

6T1Z | pdb_00006t1z