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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "AgamOBP7"

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Search Summary

This query matches 383 Structures.

Refinements

Structure Determination Methodology

experimental (383)

Scientific Name of Source Organism

	Homo sapiens (172)
	synthetic construct (58)
	Amanita phalloides (54)
	Oryctolagus cuniculus (30)
	Gallus gallus (23)
	Sus scrofa (18)
	Conus geographus (16)
	Chlamydomonas reinhardtii (15)
	Arabidopsis thaliana (13)
	Mus musculus (13)

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Taxonomy

	Eukaryota (296)
	other sequences (58)
	Eukaryota (eukaryotes) (23)
	Bacteria (22)
	Duplodnaviria (8)
	unclassified sequences (4)

Experimental Method

	X-RAY DIFFRACTION (234)
	SOLUTION NMR (79)
	ELECTRON MICROSCOPY (68)
	FIBER DIFFRACTION (2)

Polymer Entity Type

	Protein (383)
	DNA (18)
	RNA (18)

Refinement Resolution (Å)

	0.5 - 1.0 (7)
	1.0 - 1.5 (56)
	1.5 - 2.0 (92)
	2.0 - 2.5 (45)
	2.5 - 3.0 (36)
	3.0 - 3.5 (30)
	3.5 - 4.0 (26)
	> 4.5 (12)

Release Date

	1990 - 1994 (6)
	1995 - 1999 (14)
	2000 - 2004 (37)
	2005 - 2009 (54)
	2010 - 2014 (38)
	2015 - 2019 (99)
	2020 - 2024 (132)
	2025 - 2029 (3)

Enzyme Classification Name

	Hydrolases (114)
	Transferases (38)
	Lyases (19)
	Isomerases (11)
	Oxidoreductases (6)

Membrane Protein Annotation

	OPM (12)
	PDBTM (2)
	MemProtMD (1)
	mpstruc (1)

Symmetry Type

	Asymmetric (289)
	Helical (73)
	Cyclic (24)
	Dihedral (21)

SCOP Classification

	Alpha and beta proteins (a+b) (24)
	Alpha and beta proteins (a/b) (25)
	Artifacts (10)
	Designed proteins (9)
	Peptides (26)
	Small proteins (17)
	All beta proteins (11)
	Low resolution protein structures (3)
	All alpha proteins (4)
	Coiled coil proteins (2)

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AllSelected

1 to 25 of 383 Structures

Page 1 of 16

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1AG7 \| pdb_00001ag7	Download File View File

CONOTOXIN GS, NMR, 20 STRUCTURES

Hill, J.M., Alewood, P.F., Craik, D.J.

(1997) Structure 5: 571-583

Released	1998-04-08
Method	SOLUTION NMR
Organisms	Conus geographus
Macromolecule	CONOTOXIN GS (protein)

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1AS5 \| pdb_00001as5	Download File View File

SOLUTION STRUCTURE OF CONOTOXIN Y-PIIIE FROM CONUS PURPURASCENS, NMR, 14 STRUCTURES

Mitchell, S.S., Shon, K., Foster, M.P., Olivera, B.M., Ireland, C.M.

(1998) Biochemistry 37: 1215-1220

Released	1998-10-14
Method	SOLUTION NMR
Organisms	Conus purpurascens
Macromolecule	CONOTOXIN Y-PIIIE (protein)

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1AV3 \| pdb_00001av3	Download File View File

POTASSIUM CHANNEL BLOCKER KAPPA CONOTOXIN PVIIA FROM C. PURPURASCENS, NMR, 20 STRUCTURES

Scanlon, M.J., Naranjo, D., Thomas, L., Alewood, P.F., Lewis, R.J., Craik, D.J.

(1997) Structure 5: 1585-1597

Released	1998-10-14
Method	SOLUTION NMR
Organisms	Conus purpurascens
Macromolecule	Kappa-conotoxin PVIIA (protein)

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1BDK \| pdb_00001bdk	Download File View File

AN NMR, CD, MOLECULAR DYNAMICS, AND FLUOROMETRIC STUDY OF THE CONFORMATION OF THE BRADYKININ ANTAGONIST B-9340 IN WATER AND IN AQUEOUS MICELLAR SOLUTIONS

Sejbal, J., Kotovych, G., Cann, J.R., Stewart, J.M., Gera, L.

(1996) J Med Chem 39: 1281-1292

Released	1995-12-07
Method	SOLUTION NMR
Macromolecule	bradykinin antagonist B-9340 (protein)

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1BKV \| pdb_00001bkv	Download File View File

COLLAGEN

Kramer, R.Z., Bella, J., Mayville, P., Brodsky, B., Berman, H.M.

(1999) Nat Struct Biol 6: 454-457

Released	1999-02-16
Method	X-RAY DIFFRACTION 2 Å
Macromolecule	T3-785 (protein)
Unique Ligands	ACY

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1CAG \| pdb_00001cag	Download File View File

CRYSTAL AND MOLECULAR STRUCTURE OF A COLLAGEN-LIKE PEPTIDE AT 1.9 ANGSTROM RESOLUTION

Bella, J., Eaton, M., Brodsky, B., Berman, H.M.

(1994) Science 266: 75-81

Released	1994-11-01
Method	X-RAY DIFFRACTION 1.85 Å
Macromolecule	COLLAGEN-LIKE PEPTIDE (protein)
Unique Ligands	ACY

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1CGD \| pdb_00001cgd	Download File View File

HYDRATION STRUCTURE OF A COLLAGEN PEPTIDE

Bella, J., Brodsky, B., Berman, H.M.

(1995) Structure 3: 893-906

Released	1996-06-20
Method	X-RAY DIFFRACTION 1.85 Å
Macromolecule	COLLAGEN-LIKE PEPTIDE (protein)
Unique Ligands	ACY

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1D7T \| pdb_00001d7t	Download File View File

NMR STRUCTURE OF AN ENGINEERED CONTRYPHAN CYCLIC PEPTIDE (MOTIF CPXXPXC)

Pallaghy, P.K., Norton, R.S.

(2000) Biopolymers 54: 173-179

Released	2000-09-13
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	YNK-CONTRYPHAN (protein)

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1DFY \| pdb_00001dfy	Download File View File

NMR STRUCTURE OF CONTRYPHAN-SM CYCLIC PEPTIDE (MAJOR FORM-CIS)

Pallaghy, P.K., He, W., Jimenez, E.C., Olivera, B.M., Norton, R.S.

(2000) Biochemistry 39: 12845-12852

Released	2002-05-01
Method	SOLUTION NMR
Organisms	Conus stercusmuscarum
Macromolecule	CONTRYPHAN-SM (protein)

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1DFZ \| pdb_00001dfz	Download File View File

NMR STRUCTURE OF CONTRYPHAN-SM CYCLIC PEPTIDE (MINOR FORM-TRANS)

Pallaghy, P.K., He, W., Jimenez, E.C., Olivera, B.M., Norton, R.S.

(2000) Biochemistry 39: 12845-12852

Released	2002-05-01
Method	SOLUTION NMR
Organisms	Conus stercusmuscarum
Macromolecule	CONTRYPHAN-SM (protein)

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1DG0 \| pdb_00001dg0	Download File View File

NMR STRUCTURE OF DES[GLY1]-CONTRYPHAN-R CYCLIC PEPTIDE (MAJOR FORM)

Pallaghy, P.K., He, W., Jimenez, E.C., Olivera, B.M., Norton, R.S.

(2000) Biochemistry 39: 12845-12852

Released	2003-09-09
Method	SOLUTION NMR
Organisms	Conus radiatus
Macromolecule	DES[GLY1]-CONTRYPHAN-R (protein)

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1DLZ \| pdb_00001dlz	Download File View File

SOLUTION STRUCTURE OF THE CHANNEL-FORMER ZERVAMICIN IIB (PEPTAIBOL ANTIBIOTIC)

Balashova, T.A., Shenkarev, Z.O., Tagaev, A.A., Ovchinnikova, T.V., Raap, J., Arseniev, A.S.

(2000) FEBS Lett 466: 333

Released	2000-02-03
Method	SOLUTION NMR
Organisms	Emericellopsis salmosynnemata
Macromolecule	ZERVAMICIN IIB (protein)

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1DZI \| pdb_00001dzi	Download File View File

integrin alpha2 I domain / collagen complex

Emsley, j., Knight, G., Farndale, R., Barnes, M., Liddington, R.

(2000) Cell 101: 47

Released	2001-03-01
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	COLLAGEN (protein) INTEGRIN (protein)
Unique Ligands	CO

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1EI8 \| pdb_00001ei8	Download File View File

STRUCTURAL CONSEQUENCES OF A DISCONTINUITY IN THE REPEATING TRIPEPTIDE SEQUENCE OF A COLLAGEN-LIKE TRIPLE-HELICAL PEPTIDE

Berman, H.M., Liu, J.

(2006) J Mol Biology 362: 298-311

Released	2003-09-09
Method	X-RAY DIFFRACTION 2 Å
Organisms	Drosophila melanogaster
Macromolecule	COLLAGEN-LIKE PEPTIDE (PRO-HYP-GLY)4-PG-(PRO-HYP-GLY)5 (protein)

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1EYO \| pdb_00001eyo	Download File View File

SOLUTION STRUCTURE OF CONOTOXIN TVIIA FROM CONUS TULIPA

Hill, J.M., Alewood, P.F., Craik, D.J.

(2000) Eur J Biochem 267: 4649-4657

Released	2000-09-06
Method	SOLUTION NMR
Organisms	Conus tulipa
Macromolecule	CONOTOXIN TVIIA (protein)

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1G1P \| pdb_00001g1p	Download File View File

NMR Solution Structures of delta-Conotoxin EVIA from Conus ermineus that Selectively Acts on Vertebrate Neuronal Na+ Channels

Volpon, L., Lamthanh, H., Barbier, J., Gilles, N., Molgo, J., Menez, A., Lancelin, J.M.

(2004) J Biological Chem 279: 21356-21366

Released	2000-11-01
Method	SOLUTION NMR
Organisms	Conus ermineus
Macromolecule	CONOTOXIN EVIA (protein)

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1G1Z \| pdb_00001g1z	Download File View File

NMR Solution Structures of delta-Conotoxin EVIA from Conus ermineus that Selectively Acts on Vertebrate Neuronal Na+ Channels, LEU12-PRO13 Cis isomer

Volpon, L., Lamthanh, H., Le Gall, F., Menez, A., Lancelin, J.M.

(2004) J Biological Chem 279: 21356-21366

Released	2000-11-01
Method	SOLUTION NMR
Organisms	Conus ermineus
Macromolecule	CONOTOXIN EVIA (protein)

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1GIB \| pdb_00001gib	Download File View File

MU-CONOTOXIN GIIIB, NMR

Hill, J.M., Alewood, P.F., Craik, D.J.

(1996) Biochemistry 35: 8824-8835

Released	1996-11-08
Method	SOLUTION NMR
Organisms	Conus geographus
Macromolecule	MU-CONOTOXIN GIIIB (protein)

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1GK8 \| pdb_00001gk8	Download File View File

Rubisco from Chlamydomonas reinhardtii

Taylor, T.C.

(2001) J Biological Chem 276: 48159

Released	2001-10-24
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Chlamydomonas reinhardtii
Macromolecule	RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1 (protein) RIBULOSE-1,5 BISPHOSPHATE CARBOXYLASE LARGE CHAIN (protein)
Unique Ligands	CAP, EDO, MG

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1GQ0 \| pdb_00001gq0	Download File View File

Solution structure of Antiamoebin I, a membrane channel-forming polypeptide; NMR, 20 structures

Galbraith, T.P., Harris, R., Driscoll, P.C., Wallace, B.A.

(2003) Biophys J 84: 185-194

Released	2003-01-24
Method	SOLUTION NMR
Organisms	Emericellopsis sp. 2723
Macromolecule	ANTIAMOEBIN I (protein)

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1IEO \| pdb_00001ieo	Download File View File

SOLUTION STRUCTURE OF MRIB-NH2

Sharpe, I.A., Gehrmann, J., Loughnan, M.L., Thomas, L., Adams, D.A., Atkins, A., Palant, E., Craik, D.J., Adams, D.J., Alewood, P.F., Lewis, R.J.

(2001) Nat Neurosci 4: 902-907

Released	2002-04-03
Method	SOLUTION NMR
Organisms	Conus marmoreus
Macromolecule	PROTEIN MRIB-NH2 (protein)

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1IH9 \| pdb_00001ih9	Download File View File

NMR Structure of Zervamicin IIB (peptaibol antibiotic) Bound to DPC Micelles

Shenkarev, Z.O., Balasheva, T.A., Efremov, R.G., Yakimenko, Z.A., Ovchinnikova, T.V., Raap, J., Arseniev, A.S.

(2002) Biophys J 82: 762

Released	2002-02-13
Method	SOLUTION NMR
Organisms	Emericellopsis salmosynnemata
Macromolecule	ZERVAMICIN IIB (protein)

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1IR2 \| pdb_00001ir2	Download File View File

Crystal Structure of Activated Ribulose-1,5-bisphosphate Carboxylase/oxygenase (Rubisco) from Green alga, Chlamydomonas reinhardtii Complexed with 2-Carboxyarabinitol-1,5-bisphosphate (2-CABP)

Mizohata, E., Matsumura, H., Okano, Y., Kumei, M., Takuma, H., Onodera, J., Kato, K., Shibata, N., Inoue, T., Yokota, A., Kai, Y.

(2002) J Mol Biology 316: 679-691

Released	2002-03-20
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Chlamydomonas reinhardtii
Macromolecule	Large subunit of Rubisco (protein) Small subunit of Rubisco (protein)
Unique Ligands	CAP, GOL, MG