RCSB PDB: Search

3LK7 \| pdb_00003lk7	Download File View File

The Crystal Structure of UDP-N-acetylmuramoylalanine-D-glutamate (MurD) ligase from Streptococcus agalactiae to 1.5A

Stein, A.J., Sather, A., Shakelford, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2010-02-09
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Streptococcus agalactiae serogroup V
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	CL, SO4

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7SIR \| pdb_00007sir	Download File View File

Crystal Structure of UDP-N-acetylmuramoylalanine-D-glutamate ligase from Acinetobacter baumannii AB5075-UW

Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2021-11-03
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Acinetobacter baumannii AB307-0294
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	FMT

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7SY9 \| pdb_00007sy9	Download File View File

Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from Pseudomonas aeruginosa PAO1

Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2021-12-15
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	ACT, FMT

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7TI7 \| pdb_00007ti7	Download File View File

Crystal Structure of UDP-N-acetylmuramoylalanine-D-glutamate ligase from Acinetobacter baumannii AB5075-UW in complex with ADP

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2022-01-26
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Acinetobacter baumannii
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	ADP, CA, CL, EDO, MG

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7U35 \| pdb_00007u35	Download File View File

Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from Pseudomonas aeruginosa PAO1 in complex with ADP

Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2022-03-09
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	ADP, EDO

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8DP2 \| pdb_00008dp2	Download File View File

Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from Pseudomonas aeruginosa PAO1 in complex with UMA (Uridine-5'-diphosphate-N-acetylmuramoyl-L-Alanine)

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2022-08-17
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	ACT, GOL, MG, PE8, PO4, SIN, UMA

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8V8W \| pdb_00008v8w	Download File View File

Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (Tetragonal P form)

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2023-12-13
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Escherichia coli K-12
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	ACT, MPD, OXM, SO4

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8V8X \| pdb_00008v8x	Download File View File

Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (Orthorhombic P form2)

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2023-12-13
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli K-12
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	GLY

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8V8Y \| pdb_00008v8y	Download File View File

Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (Orthorhombic P form)

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2023-12-13
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Escherichia coli K-12
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	CL, GOL, MG, MPD, NA

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8VW0 \| pdb_00008vw0	Download File View File

Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (AMP bound)

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2024-02-14
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Escherichia coli K-12
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	AMP, CA, DMS, MG, MPD

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8VW1 \| pdb_00008vw1	Download File View File

Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (ADP bound)

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2024-02-14
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Escherichia coli K-12
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	ADP, CA, DMS, MG, MPD

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8VW2 \| pdb_00008vw2	Download File View File

Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (ATP bound)

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2024-02-14
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Escherichia coli K-12
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	ATP, CA, DMS, MG, MPD

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9BN8 \| pdb_00009bn8	Download File View File

Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli in complex with UMA and inhibitor A19

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2024-05-15
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Escherichia coli K-12
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	A1AQS, GOL, SO4, UMA

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9BN9 \| pdb_00009bn9	Download File View File

Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli in complex with UMA and two inhibitor A19 molecules

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2024-05-15
Method	X-RAY DIFFRACTION 1.23 Å
Organisms	Escherichia coli K-12
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	A1AQS, CL, GOL, SO4, UMA

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9DQW \| pdb_00009dqw	Download File View File

Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli in complex with UMA and AMP-PNP

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2024-10-09
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Escherichia coli K-12
Macromolecule	UDP-N-acetylmuramoylalanine--D-glutamate ligase (protein)
Unique Ligands	ANP, CL, EPE, GOL, MG, SO4, UMA

3LK7 | pdb_00003lk7

The Crystal Structure of UDP-N-acetylmuramoylalanine-D-glutamate (MurD) ligase from Streptococcus agalactiae to 1.5A

7SIR | pdb_00007sir

Crystal Structure of UDP-N-acetylmuramoylalanine-D-glutamate ligase from Acinetobacter baumannii AB5075-UW

7SY9 | pdb_00007sy9

Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from Pseudomonas aeruginosa PAO1

7TI7 | pdb_00007ti7

Crystal Structure of UDP-N-acetylmuramoylalanine-D-glutamate ligase from Acinetobacter baumannii AB5075-UW in complex with ADP

7U35 | pdb_00007u35

Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from Pseudomonas aeruginosa PAO1 in complex with ADP

8DP2 | pdb_00008dp2

Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from Pseudomonas aeruginosa PAO1 in complex with UMA (Uridine-5'-diphosphate-N-acetylmuramoyl-L-Alanine)

8V8W | pdb_00008v8w

Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (Tetragonal P form)

8V8X | pdb_00008v8x

Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (Orthorhombic P form2)

8V8Y | pdb_00008v8y

Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (Orthorhombic P form)

8VW0 | pdb_00008vw0

Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (AMP bound)

8VW1 | pdb_00008vw1

Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (ADP bound)

8VW2 | pdb_00008vw2

Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (ATP bound)

9BN8 | pdb_00009bn8

Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli in complex with UMA and inhibitor A19

9BN9 | pdb_00009bn9

Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli in complex with UMA and two inhibitor A19 molecules

9DQW | pdb_00009dqw

Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli in complex with UMA and AMP-PNP

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Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

3LK7 | pdb_00003lk7

7SIR | pdb_00007sir

7SY9 | pdb_00007sy9

7TI7 | pdb_00007ti7

7U35 | pdb_00007u35

8DP2 | pdb_00008dp2

8V8W | pdb_00008v8w

8V8X | pdb_00008v8x

8V8Y | pdb_00008v8y

8VW0 | pdb_00008vw0

8VW1 | pdb_00008vw1

8VW2 | pdb_00008vw2

9BN8 | pdb_00009bn8

9BN9 | pdb_00009bn9

9DQW | pdb_00009dqw