RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Source Organism Taxonomy ID (Full Lineage) = "1114302"

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 18 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (18)

Scientific Name of Source Organism

	Synechocystis sp. (18)
	Spinacia oleracea (3)

Taxonomy

	Bacteria (18)
	Eukaryota (3)

Experimental Method

	X-RAY DIFFRACTION (17)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (18)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (8)
	2.0 - 2.5 (4)
	2.5 - 3.0 (1)
	3.0 - 3.5 (2)

Release Date

	2000 - 2004 (5)
	2005 - 2009 (12)
	2010 - 2014 (1)

Enzyme Classification Name

	Oxidoreductases (6)
	Isomerases (1)
	Transferases (1)

Symmetry Type

	Asymmetric (10)
	Cyclic (6)
	Dihedral (2)

SCOP Classification

	Alpha and beta proteins (a+b) (5)
	Alpha and beta proteins (a/b) (7)
	All beta proteins (7)
	Small proteins (6)
	Artifacts (3)
	All alpha proteins (1)

AllSelected

1 to 18 of 18 Polymer Entities

Page 1 of 1

Sort by

Explore in 3D

1E29 \| pdb_00001e29	Download File View File

PSII associated cytochrome C549 from Synechocystis sp.

Frazao, C., Enguita, F.J., Coelho, R., Sheldrick, G.M.

(2001) J Biol Inorg Chem 6: 324

Released	2001-05-04
Method	X-RAY DIFFRACTION 1.21 Å
Organisms	Synechocystis sp.
Macromolecule	CYTOCHROME C549 (protein)
Unique Ligands	CA, HEC

Explore in 3D

1M9W \| pdb_00001m9w	Download File View File

Study of electrostatic potential surface distribution using high resolution side-chain conformation determined by NMR

Monleon, D., Celda, B.

(2003) Biopolymers 70: 212-220

Released	2002-08-14
Method	SOLUTION NMR
Organisms	Synechocystis sp.
Macromolecule	plastocyanin (protein)

Explore in 3D

1T3I \| pdb_00001t3i	Download File View File

Structure of slr0077/SufS, the Essential Cysteine Desulfurase from Synechocystis PCC 6803

Tirupati, B., Vey, J.L., Drennan, C.L., Bollinger Jr., J.M.

(2004) Biochemistry 43: 12210-12219

Released	2004-09-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Synechocystis sp.
Macromolecule	Probable cysteine desulfurase (protein)
Unique Ligands	GOL, PLP
Unique branched monosaccharides	FRU, TU4

Explore in 3D

1TQJ \| pdb_00001tqj	Download File View File

Crystal structure of D-ribulose 5-phosphate 3-epimerase from Synechocystis to 1.6 angstrom resolution

Wise, E.L., Akana, J., Gerlt, J.A., Rayment, I.

(2004) Acta Crystallogr D Biol Crystallogr 60: 1687-1690

Released	2004-08-31
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Synechocystis sp.
Macromolecule	Ribulose-phosphate 3-epimerase (protein)

Explore in 3D

1UL3 \| pdb_00001ul3	Download File View File

Crystal Structure of PII from Synechocystis sp. PCC 6803

Xu, Y., Carr, P.D., Clancy, P., Garcia-Dominguez, M., Forchhammer, K., Florencio, F., Tandeau de Marsac, N., Vasudevan, S.G., Ollis, D.L.

(2003) Acta Crystallogr D Biol Crystallogr 59: 2183-2190

Released	2003-12-16
Method	X-RAY DIFFRACTION 2 Å
Organisms	Synechocystis sp.
Macromolecule	Nitrogen regulatory protein P-II (protein)
Unique Ligands	CA, GOL

Explore in 3D

1WWJ \| pdb_00001wwj	Download File View File

crystal structure of KaiB from Synechocystis sp.

Hitomi, K., Oyama, T., Han, S., Arvai, A.S., Tainer, J.A., Getzoff, E.D.

(2005) J Biological Chem 280: 19127-19135

Released	2005-02-15
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Synechocystis sp.
Macromolecule	Circadian clock protein kaiB (protein)
Unique Ligands	BET, IMD, MLT

Explore in 3D

2G29 \| pdb_00002g29	Download File View File

crystal structure of the periplasmic nitrate-binding protein NrtA from Synechocystis PCC 6803

Koropatkin, N.M., Pakrasi, H.B., Smith, T.J.

(2006) Proc Natl Acad Sci U S A 103: 9820-9825

Released	2006-07-11
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Synechocystis sp.
Macromolecule	Nitrate transport protein nrtA (protein)
Unique Ligands	NO3

Explore in 3D

2HFN \| pdb_00002hfn	Download File View File

Crystal Structures of the Synechocystis Photoreceptor Slr1694 Reveal Distinct Structural States Related to Signaling

Yuan, H., Anderson, S., Masuda, S., Dragnea, V., Moffat, K., Bauer, C.E.

(2006) Biochemistry 45: 12687-12694

Released	2006-12-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Synechocystis sp.
Macromolecule	Synechocystis Photoreceptor (Slr1694) (protein)
Unique Ligands	FMN

Explore in 3D

2OV3 \| pdb_00002ov3	Download File View File

Crystal structure of 138-173 ZnuA deletion mutant plus zinc bound

Smith, T.J., Wei, B.

(2007) Biochemistry 46: 8734-8743

Released	2007-08-07
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Synechocystis sp.
Macromolecule	Periplasmic binding protein component of an ABC type zinc uptake transporter (protein)
Unique Ligands	ZN

Explore in 3D

2PU9 \| pdb_00002pu9	Download File View File

Crystal srtucture of the binary complex between ferredoxin: thioredoxin reductase and thioredoxin f

Dai, S.

(2007) Nature 448: 92-96

Released	2007-07-10
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Spinacia oleracea Synechocystis sp.
Macromolecule	Ferredoxin-thioredoxin reductase, catalytic chain (protein) Ferredoxin-thioredoxin reductase, variable chain (protein) Thioredoxin F-type, chloroplast (protein)
Unique Ligands	SF4, SO4

Explore in 3D

2PUK \| pdb_00002puk	Download File View File

Crystal structure of the binary complex between ferredoxin: thioredoxin reductase and thioredoxin m

Dai, S., Friemann, R., Schurmann, P., Eklund, H.

(2007) Nature 448: 92-96

Released	2007-07-10
Method	X-RAY DIFFRACTION 3 Å
Organisms	Spinacia oleracea Synechocystis sp.
Macromolecule	Ferredoxin-thioredoxin reductase, catalytic chain (protein) Ferredoxin-thioredoxin reductase, variable chain (protein) Thioredoxin M-type, chloroplast (TRX-M) (protein)
Unique Ligands	SF4

Explore in 3D

2PUO \| pdb_00002puo	Download File View File

Crystal srtucture of the NEM modified ferredoxin:thioredoxin reductase

Dai, S.

(2007) Nature 448: 92-96

Released	2007-07-10
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Synechocystis sp.
Macromolecule	Ferredoxin-thioredoxin reductase, catalytic chain (protein) Ferredoxin-thioredoxin reductase, variable chain (protein)
Unique Ligands	NEQ, SF4, SO4

Explore in 3D

2PVD \| pdb_00002pvd	Download File View File

Crystal srtucture of the reduced ferredoxin:thioredoxin reductase

Dai, S.

(2007) Nature 448: 92-96

Released	2007-07-10
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Synechocystis sp.
Macromolecule	Ferredoxin-thioredoxin reductase, catalytic chain (protein) Ferredoxin-thioredoxin reductase, variable chain (protein)
Unique Ligands	SF4, SO4

Explore in 3D

2PVG \| pdb_00002pvg	Download File View File

Crystal srtucture of the binary complex between ferredoxin and ferredoxin:thioredoxin reductase

Dai, S.

(2007) Nature 448: 92-96

Released	2007-07-10
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Synechocystis sp.
Macromolecule	Ferredoxin-1 (protein) Ferredoxin-thioredoxin reductase, catalytic chain (protein) Ferredoxin-thioredoxin reductase, variable chain (protein)
Unique Ligands	FES, SF4

Explore in 3D

2PVO \| pdb_00002pvo	Download File View File

Crystal srtucture of the ternary complex between thioredoxin f, ferredoxin, and ferredoxin: thioredoxin reductase

Dai, S.

(2007) Nature 448: 92-96

Released	2007-07-10
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Spinacia oleracea Synechocystis sp.
Macromolecule	Ferredoxin-1 (protein) Ferredoxin-thioredoxin reductase, catalytic chain (protein) Ferredoxin-thioredoxin reductase, variable chain (protein) Thioredoxin F-type, chloroplast (protein)
Unique Ligands	FES, SF4, SO4

Explore in 3D

3BN4 \| pdb_00003bn4	Download File View File

Carboxysome Subunit, CcmK1

Tanaka, S., Sawaya, M.R., Yeates, T.O.

(2008) Science 319: 1083-1086

Released	2008-03-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Synechocystis sp.
Macromolecule	Carbon dioxide-concentrating mechanism protein ccmK homolog 1 (protein)
Unique Ligands	SO4

Explore in 3D

3CIM \| pdb_00003cim	Download File View File

Carboxysome shell protein, CcmK2 C-terminal deletion mutant

Tanaka, S., Sawaya, M.R., Yeates, T.O.

(2009) Protein Sci 18: 108-120

Released	2009-02-03
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Synechocystis sp.
Macromolecule	Carbon dioxide-concentrating mechanism protein ccmK homolog 2 (protein)
Unique Ligands	GOL, SO4

Explore in 3D

4BWI \| pdb_00004bwi	Download File View File

Structure of the phytochrome Cph2 from Synechocystis sp. PCC6803

Anders, K., Angerer, V., Widany, G.D., Mroginski, M.A., von Stetten, D., Essen, L.-O.

(2013) J Biological Chem 288: 35714

Released	2013-10-30
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Synechocystis sp.
Macromolecule	PHYTOCHROME-LIKE PROTEIN CPH2 (protein)
Unique Ligands	CYC, FMT, GLU, GOL

1 to 18 of 18 Polymer Entities

Page 1 of 1

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1E29 | pdb_00001e29

PSII associated cytochrome C549 from Synechocystis sp.

1M9W | pdb_00001m9w

Study of electrostatic potential surface distribution using high resolution side-chain conformation determined by NMR

1T3I | pdb_00001t3i

Structure of slr0077/SufS, the Essential Cysteine Desulfurase from Synechocystis PCC 6803

1TQJ | pdb_00001tqj

Crystal structure of D-ribulose 5-phosphate 3-epimerase from Synechocystis to 1.6 angstrom resolution

1UL3 | pdb_00001ul3

Crystal Structure of PII from Synechocystis sp. PCC 6803

1WWJ | pdb_00001wwj

crystal structure of KaiB from Synechocystis sp.

2G29 | pdb_00002g29

crystal structure of the periplasmic nitrate-binding protein NrtA from Synechocystis PCC 6803

2HFN | pdb_00002hfn

Crystal Structures of the Synechocystis Photoreceptor Slr1694 Reveal Distinct Structural States Related to Signaling

2OV3 | pdb_00002ov3

Crystal structure of 138-173 ZnuA deletion mutant plus zinc bound

2PU9 | pdb_00002pu9

Crystal srtucture of the binary complex between ferredoxin: thioredoxin reductase and thioredoxin f

2PUK | pdb_00002puk

Crystal structure of the binary complex between ferredoxin: thioredoxin reductase and thioredoxin m

2PUO | pdb_00002puo

Crystal srtucture of the NEM modified ferredoxin:thioredoxin reductase

2PVD | pdb_00002pvd

Crystal srtucture of the reduced ferredoxin:thioredoxin reductase

2PVG | pdb_00002pvg

Crystal srtucture of the binary complex between ferredoxin and ferredoxin:thioredoxin reductase

2PVO | pdb_00002pvo

Crystal srtucture of the ternary complex between thioredoxin f, ferredoxin, and ferredoxin: thioredoxin reductase

3BN4 | pdb_00003bn4

Carboxysome Subunit, CcmK1

3CIM | pdb_00003cim

Carboxysome shell protein, CcmK2 C-terminal deletion mutant

4BWI | pdb_00004bwi

Structure of the phytochrome Cph2 from Synechocystis sp. PCC6803

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1E29 | pdb_00001e29

1M9W | pdb_00001m9w

1T3I | pdb_00001t3i

1TQJ | pdb_00001tqj

1UL3 | pdb_00001ul3

1WWJ | pdb_00001wwj

2G29 | pdb_00002g29

2HFN | pdb_00002hfn

2OV3 | pdb_00002ov3

2PU9 | pdb_00002pu9

2PUK | pdb_00002puk

2PUO | pdb_00002puo

2PVD | pdb_00002pvd

2PVG | pdb_00002pvg

2PVO | pdb_00002pvo

3BN4 | pdb_00003bn4

3CIM | pdb_00003cim

4BWI | pdb_00004bwi