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235,183 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Mycolicibacterium smegmatis"

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Search Summary

This query matches 776 Structures.

Refinements

Structure Determination Methodology

experimental (776)

Scientific Name of Source Organism

	Mycolicibacterium smegmatis MC2 155 (602)
	Mycolicibacterium smegmatis (177)
	synthetic construct (15)
	Mycobacterium tuberculosis H37Rv (9)
	Escherichia coli (6)
	Mycolicibacterium smegmatis MC2 51 (5)
	Tequatrovirus T4 (5)
	Enterobacteria phage RB59 (2)
	Mycobacterium tuberculosis (2)
	Streptomyces muensis (2)

More...

Taxonomy

	Bacteria (776)
	other sequences (15)
	Duplodnaviria (7)
	Eukaryota (1)
	unclassified sequences (1)

Experimental Method

	X-RAY DIFFRACTION (554)
	ELECTRON MICROSCOPY (216)
	SOLUTION NMR (6)

Polymer Entity Type

	Protein (775)
	RNA (47)
	DNA (38)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (37)
	1.5 - 2.0 (207)
	2.0 - 2.5 (186)
	2.5 - 3.0 (149)
	3.0 - 3.5 (110)
	3.5 - 4.0 (56)
	4.0 - 4.5 (12)
	> 4.5 (11)

Release Date

	2000 - 2004 (10)
	2005 - 2009 (63)
	2010 - 2014 (137)
	2015 - 2019 (219)
	2020 - 2024 (320)
	2025 - 2029 (27)

Enzyme Classification Name

	Transferases (150)
	Oxidoreductases (131)
	Translocases (54)
	Hydrolases (138)
	Lyases (50)
	Isomerases (24)
	Ligases (23)

Membrane Protein Annotation

	PDBTM (108)
	mpstruc (81)
	OPM (80)
	MemProtMD (68)

Symmetry Type

	Asymmetric (455)
	Cyclic (239)
	Dihedral (70)
	Tetrahedral (21)
	Icosahedral (4)
	Octahedral (2)
	Helical (1)

SCOP Classification

	Alpha and beta proteins (a/b) (86)
	All alpha proteins (40)
	Alpha and beta proteins (a+b) (58)
	Artifacts (31)
	All beta proteins (15)
	Multi-domain proteins (alpha and beta) (10)
	Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 25 of 776 Structures

Page 1 of 32

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1GX3 \| pdb_00001gx3	Download File View File

M. smegmatis arylamine N-acetyl transferase

Sandy, J., Mushtaq, A., Kawamura, A., Sinclair, J., Sim, E., Noble, M.

(2002) J Mol Biology 318: 1071

Released	2002-06-13
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	ARYLAMINE N-ACETYLTRANSFERASE (protein)

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1TEX \| pdb_00001tex	Download File View File

Mycobacterium smegmatis Stf0 Sulfotransferase with Trehalose

Mougous, J.D., Petzold, C.J., Senaratne, R.H., Lee, D.H., Akey, D.L., Lin, F.L., Munchel, S.E., Pratt, M.R., Riley, L.W., Leary, J.A., Berger, J.M., Bertozzi, C.R.

(2004) Nat Struct Mol Biol 11: 721-729

Released	2004-07-20
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	Stf0 Sulfotransferase (protein)
Unique branched monosaccharides	GLC

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1UBC \| pdb_00001ubc	Download File View File

Structure of Reca Protein

Datta, S., Krishna, R., Ganesh, N., Chandra, N.R., Muniyappa, K., Vijayan, M.

(2003) J Bacteriol 185: 4280-4284

Released	2003-07-22
Method	X-RAY DIFFRACTION 3.8 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	RecA (protein)

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1UBE \| pdb_00001ube	Download File View File

MsRecA-ADP Complex

Datta, S., Krishna, R., Ganesh, N., Chandra, N.R., Muniyappa, K., Vijayan, M.

(2003) J Bacteriol 185: 4280-4284

Released	2003-07-22
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	RecA (protein)
Unique Ligands	ADP

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1UBF \| pdb_00001ubf	Download File View File

MsREcA-ATPgS complex

Datta, S., Krishna, R., Ganesh, N., Chandra, N.R., Muniyappa, K., Vijayan, M.

(2003) J Bacteriol 185: 4280-4284

Released	2003-07-22
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	RecA (protein)
Unique Ligands	AGS

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1UBG \| pdb_00001ubg	Download File View File

MsREcA-dATP complex

Datta, S., Krishna, R., Ganesh, N., Chandra, N.R., Muniyappa, K., Vijayan, M.

(2003) J Bacteriol 185: 4280-4284

Released	2003-07-22
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	RecA (protein)
Unique Ligands	DTP

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1UUN \| pdb_00001uun	Download File View File

Main porin from Mycobacterium smegmatis (MspA)

Faller, M., Niederweis, M., Schulz, G.E.

(2004) Science 303: 1189

Released	2004-02-26
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	MSPA (protein)

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1UVH \| pdb_00001uvh	Download File View File

X-ray structure of Dps from Mycobacterium smegmatis

Ilari, A., Ceci, P., Falvo, E., Chiancone, E.

(2005) J Biological Chem 280: 34776

Released	2005-02-09
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	STARVATION-INDUCED DNA PROTECTING PROTEIN (protein)
Unique Ligands	FE

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1VEI \| pdb_00001vei	Download File View File

Mycobacterium smegmatis Dps

Roy, S., Gupta, S., Das, S., Sekar, K., Chatterji, D., Vijayan, M.

(2004) J Mol Biology 339: 1103-1113

Released	2004-06-29
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	starvation-induced DNA protecting protein (protein)
Unique Ligands	FE, SO4

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1VEL \| pdb_00001vel	Download File View File

Mycobacterium smegmatis Dps tetragonal form

Roy, S., Gupta, S., Das, S., Sekar, K., Chatterji, D., Vijayan, M.

(2004) J Mol Biology 339: 1103-1113

Released	2004-06-29
Method	X-RAY DIFFRACTION 2.99 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	starvation-induced DNA protecting protein (protein)
Unique Ligands	CD, NA, SO4

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1VEQ \| pdb_00001veq	Download File View File

Mycobacterium smegmatis Dps Hexagonal form

Roy, S., Gupta, S., Das, S., Sekar, K., Chatterji, D., Vijayan, M.

(2004) J Mol Biology 339: 1103-1113

Released	2004-06-29
Method	X-RAY DIFFRACTION 3.98 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	starvation-induced DNA protecting protein (protein)
Unique Ligands	FE

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1W5R \| pdb_00001w5r	Download File View File

X-ray crystallographic structure of a C70Q Mycobacterium smegmatis N- arylamine Acetyltransferase

Holton, S.J., Sandy, J., Rodrigues-Lima, F., Dupret, J.-M., Bhakta, S., Noble, M.E.M., Sim, E.

(2005) Biochem J 390: 115

Released	2005-05-11
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	ARYLAMINE N-ACETYLTRANSFERASE (protein)

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1W6F \| pdb_00001w6f	Download File View File

Arylamine N-acetyltransferase from Mycobacterium smegmatis with the anti-tubercular drug isoniazid bound in the active site.

Sandy, J., Holton, S., Fullham, E., Sim, E., Noble, M.E.M.

(2005) Protein Sci 14: 775

Released	2005-02-23
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	ARYLAMINE N-ACETYLTRANSFERASE (protein)
Unique Ligands	ISZ

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1X3E \| pdb_00001x3e	Download File View File

Crystal structure of the single-stranded DNA-binding protein from Mycobacterium smegmatis

Saikrishnan, K., Manjunath, G.P., Singh, P., Jeyakanthan, J., Dauter, Z., Sekar, K., Muniyappa, K., Vijayan, M.

(2005) Acta Crystallogr D Biol Crystallogr 61: 1140-1148

Released	2005-08-15
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	Single-strand binding protein (protein)
Unique Ligands	CD

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1X3F \| pdb_00001x3f	Download File View File

Crystal structure of the single-stranded DNA-binding protein from Mycobacterium SMEGMATIS

Saikrishnan, K., Manjunath, G.P., Singh, P., Jeyakanthan, J., Dauter, Z., Sekar, K., Muniyappa, K., Vijayan, M.

(2005) Acta Crystallogr D Biol Crystallogr 61: 1140-1148

Released	2005-08-15
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	Single-strand binding protein (protein)
Unique Ligands	CD

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1X3G \| pdb_00001x3g	Download File View File

Crystal structure of the single-stranded DNA-binding protein from Mycobacterium SMEGMATIS

Saikrishnan, K., Manjunath, G.P., Singh, P., Jeyakanthan, J., Dauter, Z., Sekar, K., Muniyappa, K., Vijayan, M.

(2005) Acta Crystallogr D Biol Crystallogr 61: 1140-1148

Released	2005-08-15
Method	X-RAY DIFFRACTION 3 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	Single-strand binding protein (protein)
Unique Ligands	CD

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2G88 \| pdb_00002g88	Download File View File

MSRECA-dATP COMPLEX

Krishna, R., Manjunath, G.P., Kumar, P., Surolia, A., Chandra, N.R., Muniyappa, K., Vijayan, M.

(2006) Nucleic Acids Res 34: 2186-2195

Released	2006-05-16
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	Protein recA (protein)
Unique Ligands	CIT, DTP, MG

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2GEJ \| pdb_00002gej	Download File View File

Crystal Structure of phosphatidylinositol mannosyltransferase (PimA) from Mycobacterium smegmatis in complex with GDP-Man

Guerin, M.E., Buschiazzo, A., Kordulakova, J., Jackson, M., Alzari, P.M.

(2007) J Biological Chem 282: 20705-20714

Released	2007-04-03
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	PHOSPHATIDYLINOSITOL MANNOSYLTRANSFERASE (PimA) (protein)
Unique Ligands	GDD

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2GEK \| pdb_00002gek	Download File View File

Crystal Structure of phosphatidylinositol mannosyltransferase (PimA) from Mycobacterium smegmatis in complex with GDP

Guerin, M.E., Buschiazzo, A., Kordulakova, J., Jackson, M., Alzari, P.M.

(2007) J Biological Chem 282: 20705-20714

Released	2007-04-03
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	PHOSPHATIDYLINOSITOL MANNOSYLTRANSFERASE (PimA) (protein)
Unique Ligands	GDP

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2GRV \| pdb_00002grv	Download File View File

Crystal Structure of LpqW

Marland, Z., Rossjohn, J.

(2006) J Mol Biology 359: 983-997

Released	2006-07-18
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	LpqW (protein)

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2HW2 \| pdb_00002hw2	Download File View File

Crystal structure of Rifampin ADP-ribosyl transferase in complex with Rifampin

Baysarowich, J., Wright, G.D., Junop, M.

(2008) Proc Natl Acad Sci U S A 105: 4886-4891

Released	2007-07-31
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Mycolicibacterium smegmatis
Macromolecule	Rifampin ADP-ribosyl transferase (protein)
Unique Ligands	GLY, RFP

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2JFR \| pdb_00002jfr	Download File View File

Crystal structure of the PPM Ser-Thr phosphatase MsPP from Mycobacterium smegmatis in complex with phosphate at 0.83 A resolution

Bellinzoni, M., Wehenkel, A., Shepard, W., Alzari, P.M.

(2007) Structure 15: 863

Released	2007-07-24
Method	X-RAY DIFFRACTION 0.83 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	SER-THR PHOSPHATASE MSPP (protein)
Unique Ligands	CL, MG, MN, PO4

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2JFS \| pdb_00002jfs	Download File View File

Crystal structure of the PPM Ser-Thr phosphatase MsPP from Mycobacterium smegmatis in complex with cacodylate

Bellinzoni, M., Wehenkel, A., Shepard, W., Alzari, P.M.

(2007) Structure 15: 863

Released	2007-07-24
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	SER-THR PHOSPHATASE MSPP (protein)
Unique Ligands	CAC, GOL, MN

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2JFT \| pdb_00002jft	Download File View File

Crystal structure of the PPM Ser-Thr phosphatase MsPP from Mycobacterium smegmatis in complex with sulfate

Bellinzoni, M., Wehenkel, A., Shepard, W., Alzari, P.M.

(2007) Structure 15: 863

Released	2007-07-24
Method	X-RAY DIFFRACTION 1.08 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	SER-THR PHOSPHATASE MSPP (protein)
Unique Ligands	MG, MN, SO4