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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Synechocystis sp. PCC 6803 substr. Kazusa"

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This query matches 147 Structures.

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Structure Determination Methodology

experimental (147)

Scientific Name of Source Organism

	Synechocystis sp. PCC 6803 substr. Kazusa (147)
	Escherichia coli BL21(DE3) (2)
	synthetic construct (2)
	Deinococcus radiodurans (1)
	Equus caballus (1)
	Escherichia coli (1)
	Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE) (1)

Taxonomy

	Bacteria (147)
	other sequences (2)
	Eukaryota (1)
	Riboviria (1)

Experimental Method

	X-RAY DIFFRACTION (117)
	ELECTRON MICROSCOPY (23)
	SOLUTION NMR (7)
	NEUTRON DIFFRACTION (2)

Polymer Entity Type

	Protein (147)
	DNA (2)

Refinement Resolution (Å)

	1.0 - 1.5 (16)
	1.5 - 2.0 (43)
	2.0 - 2.5 (28)
	2.5 - 3.0 (31)
	3.0 - 3.5 (9)
	3.5 - 4.0 (8)
	4.0 - 4.5 (3)
	> 4.5 (3)

Release Date

	2000 - 2004 (3)
	2005 - 2009 (2)
	2010 - 2014 (26)
	2015 - 2019 (62)
	2020 - 2024 (50)
	2025 - 2029 (4)

Enzyme Classification Name

	Oxidoreductases (35)
	Hydrolases (19)
	Transferases (15)
	Lyases (14)
	Isomerases (4)
	Ligases (4)
	Translocases (1)

Membrane Protein Annotation

	PDBTM (12)
	OPM (10)
	mpstruc (8)
	MemProtMD (9)

Symmetry Type

	Asymmetric (76)
	Cyclic (60)
	Dihedral (15)
	Helical (2)
	Octahedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (20)
	All beta proteins (15)
	Alpha and beta proteins (a+b) (23)
	Artifacts (14)
	All alpha proteins (10)
	Membrane and cell surface proteins and peptides (2)

AllSelected

1 to 25 of 147 Structures

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1II5 \| pdb_00001ii5	Download File View File

CRYSTAL STRUCTURE OF THE GLUR0 LIGAND BINDING CORE COMPLEX WITH L-GLUTAMATE

Mayer, M.L., Olson, R., Gouaux, E.

(2001) J Mol Biology 311: 815-836

Released	2001-09-19
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Slr1257 protein (protein)
Unique Ligands	GLU

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1IIT \| pdb_00001iit	Download File View File

GLUR0 LIGAND BINDING CORE COMPLEX WITH L-SERINE

Mayer, M.L., Olson, R., Gouaux, E.

(2001) J Mol Biology 311: 815-836

Released	2001-09-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Slr1257 protein (protein)
Unique Ligands	SER

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1IIW \| pdb_00001iiw	Download File View File

GLUR0 LIGAND BINDING CORE: CLOSED-CLEFT LIGAND-FREE STRUCTURE

Mayer, M.L., Olson, R., Gouaux, E.

(2001) J Mol Biology 311: 815-836

Released	2001-09-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Slr1257 protein (protein)

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2LDI \| pdb_00002ldi	Download File View File

NMR solution structure of ZiaAN sub mutant

Banci, L., Bertini, I., Felli, I.C., Pavelkova, A.

(2012) Proc Natl Acad Sci U S A 109: 95-100

Released	2011-11-30
Method	SOLUTION NMR
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Zinc-transporting ATPase (protein)

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2MYN \| pdb_00002myn	Download File View File

An arsenate reductase in reduced state

Jin, C., Yu, C., Hu, C., Hu, Y.

(2015) J Biological Chem 290: 22262-22273

Released	2015-08-05
Method	SOLUTION NMR
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Glutaredoxin arsenate reductase (protein)

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2MYP \| pdb_00002myp	Download File View File

An arsenate reductase in the phosphate binding state

Jin, C., Yu, C., Hu, C., Hu, Y.

(2015) J Biological Chem 290: 22262-22273

Released	2015-08-05
Method	SOLUTION NMR
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Glutaredoxin arsenate reductase (protein)

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2MYT \| pdb_00002myt	Download File View File

An arsenate reductase in the intermediate state

Jin, C., Yu, C., Hu, C., Hu, Y.

(2015) J Biological Chem 290: 22262-22273

Released	2015-08-05
Method	SOLUTION NMR
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Glutaredoxin arsenate reductase (protein)

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2MYU \| pdb_00002myu	Download File View File

An arsenate reductase in oxidized state

Jin, C., Hu, C., Hu, Y.

(2015) J Biological Chem 290: 22262-22273

Released	2015-08-05
Method	SOLUTION NMR
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Glutaredoxin arsenate reductase (protein)

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2N47 \| pdb_00002n47	Download File View File

EC-NMR Structure of Synechocystis sp. PCC 6803 Slr1183 Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data. Northeast Structural Genomics Consortium target SgR145

Tang, Y., Huang, Y.J., Hopf, T.A., Sander, C., Marks, D., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)

(2015) Nat Methods 12: 751-754

Released	2015-07-01
Method	SOLUTION NMR
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Slr1183 protein (protein)

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2OV1 \| pdb_00002ov1	Download File View File

Crystal structure of apo form of ZnuA with flexible loop deletion

Smith, T.J., Wei, B.

(2007) Biochemistry 46: 8734-8743

Released	2007-07-10
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Periplasmic binding protein component of an ABC type zinc uptake transporter (protein)

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3GV2 \| pdb_00003gv2	Download File View File

X-ray Structure of Hexameric HIV-1 CA

Kelly, B.N.

(2009) Cell 137: 1282-1292

Released	2009-06-23
Method	X-RAY DIFFRACTION 7 Å
Organisms	Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE) Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Capsid protein p24,Carbon dioxide-concentrating mechanism protein CcmK homolog 4 (protein)

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3WUY \| pdb_00003wuy	Download File View File

Crystal structure of Nit6803

Yuan, Y.A., Yin, B., Wang, C.

(2014) J Struct Biol 188: 93-101

Released	2014-12-31
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Nitrilase (protein)

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4EML \| pdb_00004eml	Download File View File

Synechocystis sp. PCC 6803 1,4-dihydroxy-2-naphthoyl-coenzyme A synthase (MenB) in complex with bicarbonate

Song, H.G.

(2012) Biochemistry 51: 4580-4589

Released	2012-06-20
Method	X-RAY DIFFRACTION 2.043 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Naphthoate synthase (protein)
Unique Ligands	BCT, CL, GOL, MPD, SO4

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4EOC \| pdb_00004eoc	Download File View File

Crystal structure of h74q Synechocystis sp. PCYA

Kabasakal, B.V., Fisher, A.J.

To be published

Released	2012-08-29
Method	X-RAY DIFFRACTION 1.49 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Phycocyanobilin:ferredoxin oxidoreductase (protein)
Unique Ligands	BLA, CL

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4EOD \| pdb_00004eod	Download File View File

Crystal structure of H74E synechocystis sp. pcya sp. PCYA

Kabasakal, B.V., Gae, D.D.

To be published

Released	2012-08-29
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Phycocyanobilin:ferredoxin oxidoreductase (protein)
Unique Ligands	BLA, CL

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4EOE \| pdb_00004eoe	Download File View File

Crystal structure of H74A synechocystis sp. pcya

Kabasakal, B.V., Fisher, A.J.

To be published

Released	2012-08-29
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Phycocyanobilin:ferredoxin oxidoreductase (protein)
Unique Ligands	BLA, CL

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4F0T \| pdb_00004f0t	Download File View File

X-Ray Crystal Structure of Phycocyanin from Synechocystis sp. PCC 6803

Marx, A., Adir, N.

(2013) Biochim Biophys Acta 1827: 311-318

Released	2013-03-06
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	C-phycocyanin alpha chain (protein) C-phycocyanin beta chain (protein)
Unique Ligands	CYC

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4GIG \| pdb_00004gig	Download File View File

crystal structure of T69A mutant of trapped Dnae intein precursor

Van Roey, P.

(2013) Protein Sci 22: 557-563

Released	2013-03-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	DNA polymerase III subunit alpha (protein)
Unique Ligands	SO4

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4I4Z \| pdb_00004i4z	Download File View File

Synechocystis sp. PCC 6803 1,4-dihydroxy-2-naphthoyl-coenzyme A synthase (MenB) in complex with salicylyl-CoA

Song, H.G., Sun, Y.R., Li, J., Li, Y., Jiang, M., Zhou, J.H., Guo, Z.H.

(2013) PLoS One 8: e63095-e63095

Released	2013-05-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Naphthoate synthase (protein)
Unique Ligands	2NE, BCT, MLI

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4I52 \| pdb_00004i52	Download File View File

scMenB im complex with 1-hydroxy-2-naphthoyl-CoA

Song, H.G., Sun, Y.R., Li, J., Li, Y., Jiang, M., Zhou, J.H., Guo, Z.H.

(2013) PLoS One 8: e63095-e63095

Released	2013-05-08
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Naphthoate synthase (protein)
Unique Ligands	1HA, CL

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4JDQ \| pdb_00004jdq	Download File View File

Structure of the Fluorescence Recovery Protein from Synechocystis sp PCC 6803, R60K mutant

Sutter, M., Kerfeld, C.A.

(2013) Proc Natl Acad Sci U S A 110: 10022-10027

Released	2013-05-29
Method	X-RAY DIFFRACTION 3.52 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Slr1964 protein (protein)

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4JDX \| pdb_00004jdx	Download File View File

Structure of the Fluorescence Recovery Protein from Synechocystis sp PCC 6803

Sutter, M., Kerfeld, C.A.

(2013) Proc Natl Acad Sci U S A 110: 10022-10027

Released	2013-05-29
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Slr1964 protein (protein)

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4K00 \| pdb_00004k00	Download File View File

Crystal structure of Slr0204, a 1,4-dihydroxy-2-naphthoyl-CoA thioesterase from Synechocystis

Furt, F., Allen, W.J., Widhalm, J.R., Madzelan, P., Rizzo, R.C., Basset, G., Wilson, M.A.

(2013) Acta Crystallogr D Biol Crystallogr 69: 1876-1888

Released	2013-04-17
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	1,4-dihydroxy-2-naphthoyl-CoA hydrolase (protein)
Unique Ligands	EDO

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4LGL \| pdb_00004lgl	Download File View File

Crystal Structure of Glycine Decarboxylase P-protein from Synechocystis sp. PCC 6803, apo form

Hasse, D., Andersson, E., Carlsson, G., Masloboy, A., Hagemann, M., Bauwe, H., Andersson, I.

(2013) J Biological Chem 288: 35333-35345

Released	2013-10-16
Method	X-RAY DIFFRACTION 2.0004 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Glycine dehydrogenase [decarboxylating] (protein)
Unique Ligands	CL, TRS

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4LHC \| pdb_00004lhc	Download File View File

Crystal structure of Synechocystis sp. PCC 6803 glycine decarboxylase (P-protein), holo form with pyridoxal-5'-phosphate and glycine

Hasse, D., Andersson, E., Carlsson, G., Masloboy, A., Hagemann, M., Bauwe, H., Andersson, I.

(2013) J Biological Chem 288: 35333-35345

Released	2013-10-16
Method	X-RAY DIFFRACTION 1.899 Å
Organisms	Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Glycine dehydrogenase [decarboxylating] (protein)
Unique Ligands	BCN, BCT, EDO, GLY, PO4

1 to 25 of 147 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1II5 | pdb_00001ii5

1IIT | pdb_00001iit

1IIW | pdb_00001iiw

2LDI | pdb_00002ldi

2MYN | pdb_00002myn

2MYP | pdb_00002myp

2MYT | pdb_00002myt

2MYU | pdb_00002myu

2N47 | pdb_00002n47

2OV1 | pdb_00002ov1

3GV2 | pdb_00003gv2

3WUY | pdb_00003wuy

4EML | pdb_00004eml

4EOC | pdb_00004eoc

4EOD | pdb_00004eod

4EOE | pdb_00004eoe

4F0T | pdb_00004f0t

4GIG | pdb_00004gig

4I4Z | pdb_00004i4z

4I52 | pdb_00004i52

4JDQ | pdb_00004jdq

4JDX | pdb_00004jdx

4K00 | pdb_00004k00

4LGL | pdb_00004lgl

4LHC | pdb_00004lhc