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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Thermobifida fusca"

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Search Summary

This query matches 125 Structures.

Refinements

Structure Determination Methodology

experimental (125)

Scientific Name of Source Organism

	Thermobifida fusca (66)
	Thermobifida fusca YX (58)
	Thermobifida fusca TM51 (2)
	Homo sapiens (1)
	Human immunodeficiency virus (1)
	synthetic construct (1)

Taxonomy

	Bacteria (125)
	Eukaryota (1)
	Riboviria (1)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (118)
	SOLUTION NMR (4)
	ELECTRON MICROSCOPY (3)

Polymer Entity Type

	Protein (118)
	RNA (10)
	DNA (7)

Refinement Resolution (Å)

	1.0 - 1.5 (10)
	1.5 - 2.0 (51)
	2.0 - 2.5 (37)
	2.5 - 3.0 (14)
	3.0 - 3.5 (7)
	3.5 - 4.0 (2)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (7)
	2000 - 2004 (3)
	2005 - 2009 (16)
	2010 - 2014 (36)
	2015 - 2019 (25)
	2020 - 2024 (35)
	2025 - 2029 (2)

Enzyme Classification Name

	Hydrolases (37)
	Oxidoreductases (21)
	Lyases (7)
	Transferases (4)
	Ligases (3)
	Translocases (1)

Symmetry Type

	Asymmetric (95)
	Cyclic (24)
	Dihedral (7)

SCOP Classification

	Alpha and beta proteins (a/b) (28)
	All alpha proteins (10)
	Alpha and beta proteins (a+b) (7)
	All beta proteins (7)
	Artifacts (8)
	Multi-domain proteins (alpha and beta) (4)

AllSelected

1 to 25 of 125 Structures

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1BQC \| pdb_00001bqc	Download File View File

BETA-MANNANASE FROM THERMOMONOSPORA FUSCA

Hilge, M., Gloor, S.M., Piontek, K.

(1998) Structure 6: 1433-1444

Released	1999-08-13
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Thermobifida fusca
Macromolecule	PROTEIN (BETA-MANNANASE) (protein)

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1JS4 \| pdb_00001js4	Download File View File

ENDO/EXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA

Sakon, J., Wilson, D.B., Karplus, P.A.

(1997) Nat Struct Biol 4: 810-818

Released	1997-09-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Thermobifida fusca
Macromolecule	ENDO/EXOCELLULASE E4 (protein)
Unique Ligands	BGC, CA
Unique branched monosaccharides	BGC

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1MTP \| pdb_00001mtp	Download File View File

The X-ray crystal structure of a serpin from a thermophilic prokaryote

Irving, J.A., Cabrita, L.D., Rossjohn, J., Pike, R.N., Bottomley, S.P., Whisstock, J.C.

(2003) Structure 11: 387-397

Released	2003-04-15
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Thermobifida fusca
Macromolecule	Serine Proteinase Inhibitor (SERPIN), Chain A (protein) Serine Proteinase Inhibitor (SERPIN), Chain B (protein)

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1SNG \| pdb_00001sng	Download File View File

Structure of a Thermophilic Serpin in the Native State

Fulton, K.F., Buckle, A.M., Cabrita, L.D., Irving, J.A., Butcher, R.E., Smith, I., Reeve, S., Lesk, A.M., Bottomley, S.P., Rossjohn, J., Whisstock, J.C.

(2005) J Biological Chem 280: 8435-8442

Released	2004-12-14
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Thermobifida fusca
Macromolecule	COG4826: Serine protease inhibitor (protein)
Unique Ligands	SO4

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1TF4 \| pdb_00001tf4	Download File View File

ENDO/EXOCELLULASE FROM THERMOMONOSPORA

Sakon, J., Wilson, D.B., Karplus, P.A.

(1997) Nat Struct Biol 4: 810-818

Released	1997-09-04
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thermobifida fusca
Macromolecule	T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMAIN AND CELLULOSE-BINDING DOMAIN (protein)
Unique Ligands	CA

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1TML \| pdb_00001tml	Download File View File

CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF A THERMOPHILIC ENDOCELLULASE

Spezio, M., Wilson, D.B., Karplus, P.A.

(1993) Biochemistry 32: 9906-9916

Released	1994-01-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Thermobifida fusca
Macromolecule	ENDO-1,4-BETA-D-GLUCANASE (protein)
Unique Ligands	SO4

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1W4X \| pdb_00001w4x	Download File View File

Phenylacetone Monooxygenase, a Baeyer-Villiger Monooxygenase

Malito, E., Alfieri, A., Mattevi, A.

(2004) Proc Natl Acad Sci U S A 101: 13157

Released	2004-09-02
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Thermobifida fusca
Macromolecule	PHENYLACETONE MONOOXYGENASE (protein)
Unique Ligands	FAD, SO4

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2BMM \| pdb_00002bmm	Download File View File

X-ray structure of a novel thermostable hemoglobin from the actinobacterium Thermobifida fusca

Ilari, A., Franceschini, S., Bonamore, A., Boffi, A.

(2005) FEBS J 272: 4189

Released	2005-07-20
Method	X-RAY DIFFRACTION 2.48 Å
Organisms	Thermobifida fusca
Macromolecule	THERMOSTABLE HEMOGLOBIN FROM THERMOBIFIDA FUSCA (protein)
Unique Ligands	ACT, HEM

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2BOD \| pdb_00002bod	Download File View File

Catalytic domain of endo-1,4-glucanase Cel6A from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta-cellobioside

Larsson, A.M., Bergfors, T., Dultz, E., Irwin, D.C., Roos, A., Driguez, H., Wilson, D.B., Jones, T.A.

(2005) Biochemistry 44: 12915

Released	2005-10-05
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Thermobifida fusca
Macromolecule	ENDOGLUCANASE E-2 (protein)
Unique branched monosaccharides	BGC, MGL, SGC

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2BOE \| pdb_00002boe	Download File View File

Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca

Larsson, A.M., Bergfors, T., Dultz, E., Irwin, D.C., Roos, A., Driguez, H., Wilson, D.B., Jones, T.A.

(2005) Biochemistry 44: 12915

Released	2005-10-05
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Thermobifida fusca
Macromolecule	ENDOGLUCANASE E-2 (protein)

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2BOF \| pdb_00002bof	Download File View File

Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with cellotetrose

Larsson, A.M., Bergfors, T., Dultz, E., Irwin, D.C., Roos, A., Driguez, H., Wilson, D.B., Jones, T.A.

(2005) Biochemistry 44: 12915

Released	2005-10-05
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Thermobifida fusca
Macromolecule	ENDOGLUCANASE E-2 (protein)
Unique branched monosaccharides	BGC

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2BOG \| pdb_00002bog	Download File View File

Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta- cellobioside

Larsson, A.M., Bergfors, T., Dultz, E., Irwin, D.C., Roos, A., Driguez, H., Wilson, D.B., Jones, T.A.

(2005) Biochemistry 44: 12915

Released	2005-10-05
Method	X-RAY DIFFRACTION 1.04 Å
Organisms	Thermobifida fusca
Macromolecule	ENDOGLUCANASE E-2 (protein)
Unique branched monosaccharides	BGC, MGL, SGC

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2CKR \| pdb_00002ckr	Download File View File

X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF THERMOBIFIDA FUSCA ENDOGLUCANASE CEL5A (E5) E355Q IN COMPLEX WITH CELLOTETRAOSE

Berglund, G.I., Gualfetti, P.J., Requadt, C., Gross, L.S., Bergfors, T., Shaw, A., Saldajeno, M., Mitchinson, C., Sandgren, M.

To be published

Released	2007-05-29
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Thermobifida fusca
Macromolecule	ENDOGLUCANASE E-5 (protein)
Unique Ligands	BEN, NA, PG4, ZN
Unique branched monosaccharides	BGC

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2CKS \| pdb_00002cks	Download File View File

X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF THERMOBIFIDA FUSCA ENDOGLUCANASE CEL5A (E5)

Berglund, G.I., Gualfetti, P.J., Requadt, C., Gross, L.S., Bergfors, T., Shaw, A., Saldajeno, M., Mitchinson, C., Sandgren, M.

To be published

Released	2007-05-29
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Thermobifida fusca
Macromolecule	ENDOGLUCANASE E-5 (protein)
Unique Ligands	BEN, NA, ZN

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2LE1 \| pdb_00002le1	Download File View File

Solution NMR Structure of Tfu_2981 from Thermobifida fusca, Northeast Structural Genomics Consortium Target TfR85A

Pulavarti, S.V.S.R.K., Eletsky, A., Mills, J.L., Sukumaran, D.K., Wang, D., Ciccosanti, C., Hamilton, K., Rost, B., Acton, T.B., Xiao, R., Everett, J.K., Lee, H., Prestegard, J.H., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2011-06-29
Method	SOLUTION NMR
Organisms	Thermobifida fusca YX
Macromolecule	Uncharacterized protein (protein)

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2MAN \| pdb_00002man	Download File View File

MANNOTRIOSE COMPLEX OF THERMOMONOSPORA FUSCA BETA-MANNANASE

Hilge, M., Gloor, S.M., Piontek, K.

(1998) Structure 6: 1433-1444

Released	1999-08-13
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thermobifida fusca
Macromolecule	PROTEIN (BETA-MANNANASE) (protein)
Unique branched monosaccharides	BMA, MAN

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2OPJ \| pdb_00002opj	Download File View File

Crystal structure of O-succinylbenzoate synthase

Sugadev, R., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2007-02-20
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Thermobifida fusca YX
Macromolecule	O-succinylbenzoate-CoA synthase (protein)

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2PFE \| pdb_00002pfe	Download File View File

Crystal Structure of Thermobifida fusca Protease A (TFPA)

Kelch, B.A., Agard, D.A.

(2007) J Mol Biology 370: 784-795

Released	2007-07-03
Method	X-RAY DIFFRACTION 1.436 Å
Organisms	Thermobifida fusca YX
Macromolecule	Alkaline serine protease (protein)
Unique Ligands	AES, GOL, SO4

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2QE6 \| pdb_00002qe6	Download File View File

CRYSTAL STRUCTURE OF A PUTATIVE METHYLTRANSFERASE (TFU_2867) FROM THERMOBIFIDA FUSCA YX AT 1.95 A RESOLUTION

Joint Center for Structural Genomics (JCSG)

To be published

Released	2007-07-03
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Thermobifida fusca YX
Macromolecule	Uncharacterized protein Tfu_2867 (protein)
Unique Ligands	MPD, SAM, SO4

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2QVH \| pdb_00002qvh	Download File View File

Crystal structure of O-succinylbenzoate synthase complexed with O-succinyl benzoate (OSB)

Sugadev, R., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2007-08-28
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Thermobifida fusca YX
Macromolecule	O-succinylbenzoate-CoA synthase (protein)
Unique Ligands	MG, OSB

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2YLR \| pdb_00002ylr	Download File View File

SNAPSHOTS OF ENZYMATIC BAEYER-VILLIGER CATALYSIS: OXYGEN ACTIVATION AND INTERMEDIATE STABILIZATION: COMPLEX WITH NADP

Orru, R., Dudek, H.M., Martinoli, C., Torres Pazmino, D.E., Royant, A., Weik, M., Fraaije, M.W., Mattevi, A.

(2011) J Biological Chem 286: 29284

Released	2011-06-22
Method	X-RAY DIFFRACTION 2.26 Å
Organisms	Thermobifida fusca
Macromolecule	PHENYLACETONE MONOOXYGENASE (protein)
Unique Ligands	FAD, NAP

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2YLS \| pdb_00002yls	Download File View File

SNAPSHOTS OF ENZYMATIC BAEYER-VILLIGER CATALYSIS: OXYGEN ACTIVATION AND INTERMEDIATE STABILIZATION: REDUCED ENZYME BOUND TO NADP

Orru, R., Dudek, H.M., Martinoli, C., Torres Pazmino, D.E., Royant, A., Weik, M., Fraaije, M.W., Mattevi, A.

(2011) J Biological Chem 286: 29284

Released	2011-06-22
Method	X-RAY DIFFRACTION 2.26 Å
Organisms	Thermobifida fusca
Macromolecule	PHENYLACETONE MONOOXYGENASE (protein)
Unique Ligands	FAD, NAP

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2YLT \| pdb_00002ylt	Download File View File

SNAPSHOTS OF ENZYMATIC BAEYER-VILLIGER CATALYSIS: OXYGEN ACTIVATION AND INTERMEDIATE STABILIZATION: COMPLEX WITH NADP and MES

Orru, R., Dudek, H.M., Martinoli, C., Torres Pazmino, D.E., Royant, A., Weik, M., Fraaije, M.W., Mattevi, A.

(2011) J Biological Chem 286: 29284

Released	2011-06-22
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Thermobifida fusca
Macromolecule	PHENYLACETONE MONOOXYGENASE (protein)
Unique Ligands	FAD, MES, NAP

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2YLW \| pdb_00002ylw	Download File View File

SNAPSHOTS OF ENZYMATIC BAEYER-VILLIGER CATALYSIS: OXYGEN ACTIVATION AND INTERMEDIATE STABILIZATION: Arg337Lys MUTANT IN COMPLEX WITH MES

Orru, R., Dudek, H.M., Martinoli, C., Torres Pazmino, D.E., Royant, A., Weik, M., Fraaije, M.W., Mattevi, A.

(2011) J Biological Chem 286: 29284

Released	2011-06-22
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Thermobifida fusca
Macromolecule	PHENYLACETONE MONOOXYGENASE (protein)
Unique Ligands	FAD, MES, NAP

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2YLX \| pdb_00002ylx	Download File View File

SNAPSHOTS OF ENZYMATIC BAEYER-VILLIGER CATALYSIS: OXYGEN ACTIVATION AND INTERMEDIATE STABILIZATION: Asp66Ala MUTANT IN COMPLEX WITH NADP AND MES

Orru, R., Dudek, H.M., Martinoli, C., Torres Pazmino, D.E., Royant, A., Weik, M., Fraaije, M.W., Mattevi, A.

(2011) J Biological Chem 286: 29284

Released	2011-06-22
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Thermobifida fusca
Macromolecule	PHENYLACETONE MONOOXYGENASE (protein)
Unique Ligands	FAD, MES, NAP

1 to 25 of 125 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1BQC | pdb_00001bqc

1JS4 | pdb_00001js4

1MTP | pdb_00001mtp

1SNG | pdb_00001sng

1TF4 | pdb_00001tf4

1TML | pdb_00001tml

1W4X | pdb_00001w4x

2BMM | pdb_00002bmm

2BOD | pdb_00002bod

2BOE | pdb_00002boe

2BOF | pdb_00002bof

2BOG | pdb_00002bog

2CKR | pdb_00002ckr

2CKS | pdb_00002cks

2LE1 | pdb_00002le1

2MAN | pdb_00002man

2OPJ | pdb_00002opj

2PFE | pdb_00002pfe

2QE6 | pdb_00002qe6

2QVH | pdb_00002qvh

2YLR | pdb_00002ylr

2YLS | pdb_00002yls

2YLT | pdb_00002ylt

2YLW | pdb_00002ylw

2YLX | pdb_00002ylx