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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Yersinia enterocolitica"

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Search Summary

This query matches 118 Structures.

Refinements

Structure Determination Methodology

experimental (118)

Scientific Name of Source Organism

	Yersinia enterocolitica (89)
	Yersinia enterocolitica subsp. enterocolitica 8081 (17)
	Yersinia enterocolitica (type O:9) (3)
	Yersinia enterocolitica subsp. palearctica Y11 (3)
	Yersinia enterocolitica subsp. palearctica YE-P4 (3)
	Aeromonas hydrophila (2)
	Spodoptera frugiperda (2)
	Yersinia enterocolitica W22703 (2)
	Listeria monocytogenes EGD-e (1)
	Yersinia enterocolitica subsp. enterocolitica WA-314 (1)

More...

Taxonomy

	Bacteria (118)
	Eukaryota (2)

Experimental Method

	X-RAY DIFFRACTION (112)
	ELECTRON MICROSCOPY (3)
	SOLUTION NMR (2)
	SOLID-STATE NMR (1)

Polymer Entity Type

	Protein (117)
	RNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (13)
	1.5 - 2.0 (43)
	2.0 - 2.5 (33)
	2.5 - 3.0 (15)
	3.0 - 3.5 (6)
	3.5 - 4.0 (2)
	4.0 - 4.5 (2)
	> 4.5 (1)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (3)
	2000 - 2004 (7)
	2005 - 2009 (34)
	2010 - 2014 (19)
	2015 - 2019 (34)
	2020 - 2024 (20)

Enzyme Classification Name

	Hydrolases (31)
	Lyases (4)
	Isomerases (1)
	Oxidoreductases (1)
	Transferases (1)

Membrane Protein Annotation

	PDBTM (5)
	MemProtMD (4)
	OPM (3)
	mpstruc (3)

Symmetry Type

	Asymmetric (73)
	Cyclic (40)
	Dihedral (2)
	Tetrahedral (2)

SCOP Classification

	Alpha and beta proteins (a/b) (30)
	Alpha and beta proteins (a+b) (9)
	Artifacts (7)
	All beta proteins (4)
	Multi-domain proteins (alpha and beta) (4)
	All alpha proteins (1)

AllSelected

1 to 25 of 118 Structures

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1LYV \| pdb_00001lyv	Download File View File

High-resolution structure of the catalytically inactive yersinia tyrosine phosphatase C403A mutant in complex with phosphate.

Evdokimov, A.G., Waugh, D.S., Routzahn, K., Tropea, J., Cherry, S.

To be published

Released	2002-07-03
Method	X-RAY DIFFRACTION 1.363 Å
Organisms	Yersinia enterocolitica
Macromolecule	PROTEIN-TYROSINE PHOSPHATASE YOPH (protein)
Unique Ligands	CL, PO4

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1N5B \| pdb_00001n5b	Download File View File

Crystal Structure Of The Yersinia enterocolitica Molecular Chaperone Syce

Trame, C.B., McKay, D.B.

(2003) Acta Crystallogr D Biol Crystallogr 59: 389-392

Released	2002-11-20
Method	X-RAY DIFFRACTION 2 Å
Organisms	Yersinia enterocolitica
Macromolecule	YOPE regulator (protein)

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1P9H \| pdb_00001p9h	Download File View File

CRYSTAL STRUCTURE OF THE COLLAGEN-BINDING DOMAIN OF YERSINIA ADHESIN YadA

Nummelin, H., Merckel, M.C., Skurnik, M., Goldman, A.

(2004) EMBO J 23: 701-711

Released	2004-03-23
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Yersinia enterocolitica
Macromolecule	Invasin (protein)

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1PA9 \| pdb_00001pa9	Download File View File

Yersinia Protein-Tyrosine Phosphatase complexed with pNCS (Yop51,Pasteurella X,Ptpase,Yop51delta162) (Catalytic Domain, Residues 163-468) Mutant With Cys 235 Replaced By Arg (C235r)

Sun, J.P., Wu, L., Fedorov, A.A., Almo, S.C., Zhang, Z.Y.

(2003) J Biological Chem 278: 33392-33399

Released	2003-11-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Yersinia enterocolitica
Macromolecule	Protein-tyrosine phosphatase yopH (protein)
Unique Ligands	CSN

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1TTW \| pdb_00001ttw	Download File View File

Crystal structure of the Yersinia Pestis type III secretion chaperone SycH in complex with a stable fragment of YscM2

Phan, J., Tropea, J.E., Waugh, D.S.

(2004) Acta Crystallogr D Biol Crystallogr 60: 1591-1599

Released	2004-08-31
Method	X-RAY DIFFRACTION 2.38 Å
Organisms	Yersinia enterocolitica Yersinia pestis CO92
Macromolecule	YscM2 (protein) secretion chaperone (protein)

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1XVX \| pdb_00001xvx	Download File View File

Crystal Structure of iron-loaded Yersinia enterocolitica YfuA

Shouldice, S.R., McRee, D.E., Dougan, D.R., Tari, L.W., Schryvers, A.B.

(2005) J Biological Chem 280: 5820-5827

Released	2004-12-14
Method	X-RAY DIFFRACTION 1.53 Å
Organisms	Yersinia enterocolitica
Macromolecule	YfuA (protein)
Unique Ligands	CO3, EDO, FE, ZN

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1XVY \| pdb_00001xvy	Download File View File

Crystal Structure of iron-free Serratia marcescens SfuA

Shouldice, S.R., McRee, D.E., Dougan, D.R., Tari, L.W., Schryvers, A.B.

(2005) J Biological Chem 280: 5820-5827

Released	2004-12-14
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Yersinia enterocolitica
Macromolecule	sfuA (protein)
Unique Ligands	CIT

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1XXP \| pdb_00001xxp	Download File View File

Yersinia YopH (residues 163-468) C403S binds phosphotyrosyl peptide at two sites

Ivanov, M.I., Stuckey, J.A., Schubert, H.L., Saper, M.A., Bliska, J.B.

(2005) Mol Microbiol 55: 1346-1356

Released	2005-03-22
Method	X-RAY DIFFRACTION 3 Å
Organisms	Yersinia enterocolitica
Macromolecule	Hexapeptide ASP-ALA-ASP-GLU-PTR-CLE (protein) Protein-tyrosine phosphatase yopH (protein)

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1XXV \| pdb_00001xxv	Download File View File

Yersinia YopH (residues 163-468) binds phosphonodifluoromethyl-Phe containing hexapeptide at two sites

Ivanov, M.I., Stuckey, J.A., Schubert, H.L., Saper, M.A., Bliska, J.B.

(2005) Mol Microbiol 55: 1346-1356

Released	2005-03-22
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Yersinia enterocolitica
Macromolecule	Epidermal growth factor receptor derived peptide (protein) Protein-tyrosine phosphatase yopH (protein)

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1YPT \| pdb_00001ypt	Download File View File

CRYSTAL STRUCTURE OF YERSINIA PROTEIN TYROSINE PHOSPHATASE AT 2.5 ANGSTROMS AND THE COMPLEX WITH TUNGSTATE

Stuckey, J.A., Schubert, H.L., Fauman, E.B., Zhang, Z.-Y., Dixon, J.E., Saper, M.A.

(1994) Nature 370: 571-575

Released	1994-12-20
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Yersinia enterocolitica
Macromolecule	PROTEIN-TYROSINE PHOSPHATASE YERSINIA (CATALYTIC DOMAIN) (protein)

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1YTN \| pdb_00001ytn	Download File View File

HYDROLASE

Yuvaniyama, C., Fauman, E.B., Saper, M.A.

(1996) J Biological Chem 271: 18780-18788

Released	1996-11-08
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Yersinia enterocolitica
Macromolecule	YERSINIA PROTEIN TYROSINE PHOSPHATASE (protein)
Unique Ligands	NO3

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1YTS \| pdb_00001yts	Download File View File

A LIGAND-INDUCED CONFORMATIONAL CHANGE IN THE YERSINIA PROTEIN TYROSINE PHOSPHATASE

Schubert, H.L., Stuckey, J.A., Fauman, E.B., Dixon, J.E., Saper, M.A.

(1995) Protein Sci 4: 1904-1913

Released	1995-07-10
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Yersinia enterocolitica
Macromolecule	YERSINIA PROTEIN TYROSINE PHOSPHATASE (protein)
Unique Ligands	SO4

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1YTW \| pdb_00001ytw	Download File View File

YERSINIA PTPASE COMPLEXED WITH TUNGSTATE

Fauman, E.B., Schubert, H.L., Saper, M.A.

(1996) J Biological Chem 271: 18780-18788

Released	1996-11-08
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Yersinia enterocolitica
Macromolecule	YERSINIA PROTEIN TYROSINE PHOSPHATASE (protein)
Unique Ligands	SO4, WO4

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2BHO \| pdb_00002bho	Download File View File

Crystal structure of the Yersinia enterocolitica type III secretion chaperone SycT

Groll, M., Wilharm, G.

(2005) J Biological Chem 280: 31149

Released	2005-07-06
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Yersinia enterocolitica
Macromolecule	CHAPERONE PROTEIN SYCT (protein)
Unique Ligands	PT

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2BSH \| pdb_00002bsh	Download File View File

Crystal structure of the type III secretion chaperone SycT from Yersinia enterocolitica (crystal form 2)

Buttner, C.R., Cornelis, G.R., Heinz, D.W., Niemann, H.H.

(2005) Protein Sci 14: 1993-2002

Released	2005-08-15
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Yersinia enterocolitica
Macromolecule	SYCT (protein)

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2BSI \| pdb_00002bsi	Download File View File

Crystal structure of the type III secretion chaperone SycT from Yersinia enterocolitica (crystal form 1)

Buttner, C.R., Cornelis, G.R., Heinz, D.W., Niemann, H.H.

(2005) Protein Sci 14: 1993

Released	2005-09-26
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Yersinia enterocolitica
Macromolecule	YOPT CHAPERONE SYCT (protein)

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2BSJ \| pdb_00002bsj	Download File View File

Native Crystal Structure of the Type III Secretion chaperone SycT from Yersinia enterocolitica

Buttner, C.R., Cornelis, G.R., Heinz, D.W., Niemann, H.H.

(2005) Protein Sci 14: 1993

Released	2005-09-20
Method	X-RAY DIFFRACTION 1.83 Å
Organisms	Yersinia enterocolitica
Macromolecule	CHAPERONE PROTEIN SYCT (protein)
Unique Ligands	CL

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2BTI \| pdb_00002bti	Download File View File

Structure-function studies of the RmsA CsrA post-transcriptional global regulator protein family reveals a class of RNA-binding structure

Heeb, S., Kuehne, S.A., Bycroft, M., Crivii, S., Allen, M.D., Haas, D., Camara, M., Williams, P.

(2006) J Mol Biology 355: 1026

Released	2006-01-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Yersinia enterocolitica
Macromolecule	CARBON STORAGE REGULATOR HOMOLOG (protein)
Unique Ligands	ACT, SO4

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2FN0 \| pdb_00002fn0	Download File View File

Crystal structure of Yersinia enterocolitica salicylate synthase (Irp9)

Kerbarh, O., Chirgadze, D.Y., Blundell, T.L., Abell, C.

(2006) J Mol Biology 357: 524-534

Released	2006-02-14
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Yersinia enterocolitica
Macromolecule	salicylate synthetase, Irp9 (protein)
Unique Ligands	ACT, MG, PO4

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2FN1 \| pdb_00002fn1	Download File View File

Crystal structures of Yersinia enterocolitica salicylate synthase (Irp9) in complex with the reaction products salicylate and pyruvate

Kerbarh, O., Chirgadze, D.Y., Blundell, T.L., Abell, C.

(2006) J Mol Biology 357: 524-534

Released	2006-02-14
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Yersinia enterocolitica
Macromolecule	salicylate synthetase, Irp9 (protein)
Unique Ligands	MG, PYR, SAL

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2I42 \| pdb_00002i42	Download File View File

Crystal structure of Yersinia protein tyrosine phosphatase complexed with vanadate, a transition state analogue

Vijayalakshmi, J., Saper, M.A.

To be published

Released	2006-09-19
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Yersinia enterocolitica
Macromolecule	Tyrosine-protein phosphatase (protein)
Unique Ligands	VO4

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2J0P \| pdb_00002j0p	Download File View File

Structure of the haem-chaperone Proteobacteria-protein HemS

Schneider, S., Sharp, K.H., Barker, P.D., Paoli, M.

(2006) J Biological Chem 281: 32606

Released	2006-08-29
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Yersinia enterocolitica
Macromolecule	HEMIN TRANSPORT PROTEIN HEMS (protein)
Unique Ligands	12P, HEM, MLI, PEG

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2J0R \| pdb_00002j0r	Download File View File

Structure of the haem-chaperone Proteobacteria-protein HemS

Schneider, S., Sharp, K.H., Barker, P.D., Paoli, M.

(2006) J Biological Chem 281: 32606

Released	2006-08-29
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Yersinia enterocolitica
Macromolecule	HEMIN TRANSPORT PROTEIN HEMS (protein)
Unique Ligands	12P, 1PE, EDO, PEG, PGE