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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "ODORANT-BINDING PROTEIN"

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This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Homo sapiens (4)
	Methanocaldococcus jannaschii DSM 2661 (2)
	Aquifex aeolicus (1)
	Methanococcus maripaludis S2 (1)
	Rattus norvegicus (1)
	Saccharomyces cerevisiae S288C (1)
	Salmonella enterica subsp. enterica serovar Typhimurium (1)
	Thermus thermophilus (1)

Taxonomy

	Eukaryota (5)
	Archaea (3)
	Bacteria (3)

Experimental Method

	X-RAY DIFFRACTION (10)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

	Protein (11)
	DNA (4)
	RNA (1)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.5 - 2.0 (1)
	2.0 - 2.5 (3)
	2.5 - 3.0 (1)
	3.0 - 3.5 (4)
	4.0 - 4.5 (1)

Release Date

	2000 - 2004 (1)
	2010 - 2014 (3)
	2015 - 2019 (3)
	2020 - 2024 (4)

Membrane Protein Annotation

	MemProtMD (1)
	OPM (1)

Symmetry Type

	Cyclic (7)
	Asymmetric (3)
	Helical (1)

SCOP Classification

All beta proteins (1)

AllSelected

1 to 11 of 11 Structures

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1FEU \| pdb_00001feu	Download File View File

CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA.

Fedorov, R.V., Meshcheryakov, V.A., Gongadze, G.M., Fomenkova, N.P., Nevskaya, N.A., Selmer, M., Laurberg, M., Kristensen, O., Al-Karadaghi, S., Liljas, A., Garber, M.B., Nikonov, S.V.

(2001) Acta Crystallogr D Biol Crystallogr 57: 968-976

Released	2001-06-25
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thermus thermophilus
Macromolecule	50S RIBOSOMAL PROTEIN L25 (protein) 19 NT FRAGMENT OF 5S RRNA (nucleic acid) 21 NT FRAGMENT OF 5S RRNA (nucleic acid)
Unique Ligands	CD, MG

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3AZD \| pdb_00003azd	Download File View File

Crystal structure of tropomyosin N-terminal fragment at 0.98A resolution

Meshcheryakov, V.A., Krieger, I., Kostyukova, A.S., Samatey, F.A.

(2011) Acta Crystallogr D Biol Crystallogr 67: 822-825

Released	2011-10-19
Method	X-RAY DIFFRACTION 0.98 Å
Organisms	Rattus norvegicus Saccharomyces cerevisiae S288C
Macromolecule	short alpha-tropomyosin,transcription factor GCN4 (protein)

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3B0Z \| pdb_00003b0z	Download File View File

Crystal structure of cytoplasmic domain of FlhB from Salmonella typhimurium

Meshcheryakov, V.A., Samatey, F.A.

(2013) Acta Crystallogr D Biol Crystallogr 69: 812-820

Released	2012-06-20
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	Flagellar biosynthetic protein flhB (protein)
Unique Ligands	NA, ZN

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3B1S \| pdb_00003b1s	Download File View File

Crystal structure of the cytoplasmic domain of FlhB from Aquifex aeolicus

Meshcheryakov, V.A., Samatey, F.A.

(2013) Acta Crystallogr D Biol Crystallogr 69: 812-820

Released	2012-07-11
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Aquifex aeolicus
Macromolecule	Flagellar biosynthetic protein flhB (protein)

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4WIA \| pdb_00004wia	Download File View File

Crystal structure of flagellar accessory protein FlaH from Methanocaldococcus jannaschii

Meshcheryakov, V.A., Wolf, M.

(2016) Protein Sci 25: 1147-1155

Released	2015-10-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Methanocaldococcus jannaschii DSM 2661
Macromolecule	Putative flagella-related protein H (protein)
Unique Ligands	GOL, SO4

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5YA6 \| pdb_00005ya6	Download File View File

Crystal structure of archaeal flagellin FlaB1 from Methanocaldococcus jannaschii

Meshcheryakov, V.A., Wolf, M.

(2019) EMBO Rep 20:

Released	2019-02-06
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Methanocaldococcus jannaschii DSM 2661
Macromolecule	Flagellin B1 (protein)
Unique Ligands	CA

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5Z1L \| pdb_00005z1l	Download File View File

Cryo-EM structure of Methanoccus maripaludis archaellum

Meshcheryakov, V.A., Shibata, S., Schreiber, M.T., Villar-Briones, A., Jarrell, K.F., Aizawa, S., Wolf, M.

(2019) EMBO Rep 20:

Released	2019-02-13
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Methanococcus maripaludis S2
Macromolecule	Flagellin (protein)

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7CLI \| pdb_00007cli	Download File View File

Structure of NF-kB p52 homodimer bound to P-Selectin kB DNA fragment

Meshcheryakov, V.A., Wang, V.Y.-F.

(2023) Elife 12:

Released	2021-07-21
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	Nuclear factor NF-kappa-B p52 subunit (protein) DNA (5'-D(CPAPAPGPGPGPGPTPCPAPCPCPCPCPCPTPTPC)-3') (nucleic acid) DNA (5'-D(GPAPAPGPGPGPGPGPTPGPAPCPCPCPCPTPTPG)-3') (nucleic acid)

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7VUP \| pdb_00007vup	Download File View File

Structure of NF-kB p52 homodimer bound to +1/-1 swap P-Selectin kB DNA fragment

Meshcheryakov, V.A., Wang, V.Y.-F.

(2023) Elife 12:

Released	2021-11-24
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Homo sapiens
Macromolecule	Nuclear factor NF-kappa-B p52 subunit (protein) DNA (5'-D(APAPGPGPGPGPGPAPGPTPCPCPCPCPTPTPG)-3') (nucleic acid) DNA (5'-D(CPAPAPGPGPGPGPAPCPTPCPCPCPCPCPTPT)-3') (nucleic acid)

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7VUQ \| pdb_00007vuq	Download File View File

Structure of NF-kB p52 homodimer bound to A/T-centric P-Selectin kB DNA fragment

Meshcheryakov, V.A., Wang, V.Y.-F.

(2023) Elife 12:

Released	2021-11-24
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	Nuclear factor NF-kappa-B p52 subunit (protein) DNA (5'-D(CPAPAPGPGPGPGPTPTPAPCPCPCPCPCPTPT)-3') (nucleic acid) DNA (5'-D(GPAPAPGPGPGPGPGPTPAPAPCPCPCPCPTPTP*G)-3') (nucleic acid)

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7W7L \| pdb_00007w7l	Download File View File

Structure of NF-kB p52 homodimer bound to 13-mer A/T-centric P-Selectin kB DNA fragment

Meshcheryakov, V.A., Wang, V.Y.-F.

(2023) Elife 12:

Released	2022-01-26
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	Nuclear factor NF-kappa-B p52 subunit (protein) DNA (5'-D(APGPGPGPGPTPTPAPCPCPCPCPC)-3') (nucleic acid) DNA (5'-D(GPGPGPGPGPTPAPAPCPCPCPCPT)-3') (nucleic acid)

1 to 11 of 11 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1FEU | pdb_00001feu

CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA.

3AZD | pdb_00003azd

Crystal structure of tropomyosin N-terminal fragment at 0.98A resolution

3B0Z | pdb_00003b0z

Crystal structure of cytoplasmic domain of FlhB from Salmonella typhimurium

3B1S | pdb_00003b1s

Crystal structure of the cytoplasmic domain of FlhB from Aquifex aeolicus

4WIA | pdb_00004wia

Crystal structure of flagellar accessory protein FlaH from Methanocaldococcus jannaschii

5YA6 | pdb_00005ya6

Crystal structure of archaeal flagellin FlaB1 from Methanocaldococcus jannaschii

5Z1L | pdb_00005z1l

Cryo-EM structure of Methanoccus maripaludis archaellum

7CLI | pdb_00007cli

Structure of NF-kB p52 homodimer bound to P-Selectin kB DNA fragment

7VUP | pdb_00007vup

Structure of NF-kB p52 homodimer bound to +1/-1 swap P-Selectin kB DNA fragment

7VUQ | pdb_00007vuq

Structure of NF-kB p52 homodimer bound to A/T-centric P-Selectin kB DNA fragment

7W7L | pdb_00007w7l

Structure of NF-kB p52 homodimer bound to 13-mer A/T-centric P-Selectin kB DNA fragment

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1FEU | pdb_00001feu

3AZD | pdb_00003azd

3B0Z | pdb_00003b0z

3B1S | pdb_00003b1s

4WIA | pdb_00004wia

5YA6 | pdb_00005ya6

5Z1L | pdb_00005z1l

7CLI | pdb_00007cli

7VUP | pdb_00007vup

7VUQ | pdb_00007vuq

7W7L | pdb_00007w7l