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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Space Group = "P 1 21/c 1"

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Search Summary

This query matches 12 Structures.

Refinements

Structure Determination Methodology

experimental (12)

Scientific Name of Source Organism

	synthetic construct (5)
	Homo sapiens (1)
	Influenza A virus (A/Hong Kong/156/97(H5N1)) (1)
	Oxyuranus microlepidotus (1)
	Pseudomonas syringae (1)
	Pseudomonas syringae pv. syringae (1)
	Solanum tuberosum (1)
	Stichodactyla helianthus (1)

Taxonomy

	other sequences (5)
	Eukaryota (4)
	Bacteria (2)
	Riboviria (1)

Experimental Method

	X-RAY DIFFRACTION (11)
	ELECTRON CRYSTALLOGRAPHY (1)

Polymer Entity Type

	Protein (11)
	DNA (1)

Refinement Resolution (Å)

	0.5 - 1.0 (5)
	1.0 - 1.5 (4)
	1.5 - 2.0 (2)
	2.0 - 2.5 (1)

Release Date

	2010 - 2014 (2)
	2015 - 2019 (5)
	2020 - 2024 (5)

Membrane Protein Annotation

OPM (1)

Symmetry Type

Asymmetric (8)

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1 to 12 of 12 Structures

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3NGG \| pdb_00003ngg	Download File View File

X-ray Structure of Omwaprin

Banigan, J.R., Mandal, K., Sawaya, M.R., Thammavongsa, V., Hendrickx, A.P.A., Schneewind, O., Yeates, T.O., Kent, S.B.H.

(2010) Protein Sci 19: 1840-1849

Released	2010-09-08
Method	X-RAY DIFFRACTION 1.33 Å
Organisms	Oxyuranus microlepidotus
Macromolecule	Omwaprin-a (protein)

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4LFS \| pdb_00004lfs	Download File View File

High resolution x-ray structure of racemic ShK toxin

Dang, B., Kubota, T., Mandal, K., Bezanilla, F., Kent, S.B.H.

(2013) J Am Chem Soc 135: 11911-11919

Released	2013-08-14
Method	X-RAY DIFFRACTION 0.97 Å
Organisms	Stichodactyla helianthus
Macromolecule	Potassium channel toxin ShK (protein)
Unique Ligands	CL, GOL

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4RWB \| pdb_00004rwb	Download File View File

Racemic influenza M2-TM crystallized from monoolein lipidic cubic phase

Mortenson, D.E., Steinkruger, J.D., Kreitler, D.F., Gellman, S.H., Forest, K.T.

(2015) Proc Natl Acad Sci U S A 112: 13144-13149

Released	2015-10-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Influenza A virus (A/Hong Kong/156/97(H5N1))
Macromolecule	Matrix protein 2 (protein)
Unique Ligands	MPG

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5E5Q \| pdb_00005e5q	Download File View File

Racemic snakin-1 in P21/c

Yeung, H., Squire, C.J., Yosaatmadja, Y., Panjikar, S., Baker, E.N., Harris, P.W.R., Brimble, M.A.

(2016) Angew Chem Int Ed Engl 55: 7930-7933

Released	2016-05-18
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Solanum tuberosum
Macromolecule	Snakin-1 (protein)

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5EWB \| pdb_00005ewb	Download File View File

Racemic crystal structures of Pribnow box consensus promoter sequence (P21/c)

Mandal, P.K., Collie, G.W., Kauffmann, B., Srivastava, S.C., Huc, I.

(2016) Nucleic Acids Res 44: 5936-5943

Released	2016-05-18
Method	X-RAY DIFFRACTION 1.694 Å
Organisms	synthetic construct
Macromolecule	PRIBNOW BOX CONSENSUS SEQUENCE- NON-TEMPLATE STRAND (nucleic acid) PRIBNOW BOX CONSENSUS SEQUENCE- TEMPLATE STRAND (nucleic acid)

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6M7M \| pdb_00006m7m	Download File View File

rac-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712

Zee, C., Glynn, C., Gallagher-Jones, M., Miao, J., Santiago, C.G., Cascio, D., Gonen, T., Sawaya, M.R., Rodriguez, J.A.

(2019) IUCrJ 6: 197-205

Released	2019-04-03
Method	X-RAY DIFFRACTION 1.101 Å
Organisms	Pseudomonas syringae
Macromolecule	L-GSTSTA from ice nucleation protein, inaZ, and its enantiomer, D-GSTSTA (protein)

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6M9J \| pdb_00006m9j	Download File View File

Racemic-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712

Zee, C., Glynn, C., Gallagher-Jones, M., Miao, J., Santiago, C.G., Cascio, D., Gonen, T., Sawaya, M.R., Rodriguez, J.A.

(2019) IUCrJ 6: 197-205

Released	2019-03-27
Method	ELECTRON CRYSTALLOGRAPHY 0.9 Å
Organisms	Pseudomonas syringae pv. syringae
Macromolecule	Ice nucleation protein (protein)

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6UCX \| pdb_00006ucx	Download File View File

S2 symmetric peptide design number 1, Wednesday

Mulligan, V.K., Kang, C.S., Antselovich, I., Sawaya, M.R., Yeates, T.O., Baker, D.

(2020) Protein Sci 29: 2433-2445

Released	2020-09-23
Method	X-RAY DIFFRACTION 0.85 Å
Organisms	synthetic construct
Macromolecule	S2-1, Wednesday (protein)
Unique Ligands	TFA

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6UD9 \| pdb_00006ud9	Download File View File

S2 symmetric peptide design number 2, Morticia

Mulligan, V.K., Kang, C.S., Antselovich, I., Sawaya, M.R., Yeates, T.O., Baker, D.

(2020) Protein Sci 29: 2433-2445

Released	2020-09-23
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	synthetic construct
Macromolecule	S2-2, Morticia (protein)

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6UF7 \| pdb_00006uf7	Download File View File

S2 symmetric peptide design number 5, Uncle Fester

Mulligan, V.K., Kang, C.S., Antselovich, I., Sawaya, M.R., Yeates, T.O., Baker, D.

(2020) Protein Sci 29: 2433-2445

Released	2020-12-02
Method	X-RAY DIFFRACTION 0.8 Å
Organisms	synthetic construct
Macromolecule	S2-5, Uncle Fester (protein)

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7UCP \| pdb_00007ucp	Download File View File

computationally designed macrocycle

Bhardwaj, G., Baker, D., Rettie, S., Glynn, C., Sawaya, M.

(2022) Cell 185: 3520-3532.e26

Released	2022-09-14
Method	X-RAY DIFFRACTION 0.85 Å
Organisms	synthetic construct
Macromolecule	computationally designed cyclic peptide D8.3.p2 (protein)

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8T82 \| pdb_00008t82	Download File View File

Racemic mixture of amyloid beta segment 35-MVGGVV-40 forms heterochiral rippled beta-sheet, includes pentafluoropropionic acid

Sawaya, M.R., Raskatov, J.A., Hazari, A.

(2023) J Am Chem Soc 145: 25917-25926

Released	2023-11-29
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Homo sapiens
Macromolecule	amyloid beta segment 35-MVGGVV-40, racemic mixture (protein)
Unique Ligands	YWK

1 to 12 of 12 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3NGG | pdb_00003ngg

X-ray Structure of Omwaprin

4LFS | pdb_00004lfs

High resolution x-ray structure of racemic ShK toxin

4RWB | pdb_00004rwb

Racemic influenza M2-TM crystallized from monoolein lipidic cubic phase

5E5Q | pdb_00005e5q

Racemic snakin-1 in P21/c

5EWB | pdb_00005ewb

Racemic crystal structures of Pribnow box consensus promoter sequence (P21/c)

6M7M | pdb_00006m7m

rac-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712

6M9J | pdb_00006m9j

Racemic-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712

6UCX | pdb_00006ucx

S2 symmetric peptide design number 1, Wednesday

6UD9 | pdb_00006ud9

S2 symmetric peptide design number 2, Morticia

6UF7 | pdb_00006uf7

S2 symmetric peptide design number 5, Uncle Fester

7UCP | pdb_00007ucp

computationally designed macrocycle

8T82 | pdb_00008t82

Racemic mixture of amyloid beta segment 35-MVGGVV-40 forms heterochiral rippled beta-sheet, includes pentafluoropropionic acid

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Membrane Protein Annotation

Symmetry Type

3NGG | pdb_00003ngg

4LFS | pdb_00004lfs

4RWB | pdb_00004rwb

5E5Q | pdb_00005e5q

5EWB | pdb_00005ewb

6M7M | pdb_00006m7m

6M9J | pdb_00006m9j

6UCX | pdb_00006ucx

6UD9 | pdb_00006ud9

6UF7 | pdb_00006uf7

7UCP | pdb_00007ucp

8T82 | pdb_00008t82