2KMM | pdb_00002kmm

Solution NMR structure of the TGS domain of PG1808 from Porphyromonas gingivalis. Northeast Structural Genomics Consortium Target PgR122A (418-481)

• PDB DOI: https://doi.org/10.2210/pdb2KMM/pdb

• Classification: HYDROLASE
• Organism(s): Porphyromonas gingivalis
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2009-07-31 Released: 2009-11-10 
• Deposition Author(s): Yang, Y., Ramelot, T.A., Cort, J.R., Lee, D., Ciccosanti, C., Hamilton, K., Nair, R., Rost, B., Acton, T.B., Xiao, R., Swapna, G., Everett, J.K., Montelione, G.T., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)

---

Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 150 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations 

Literature

Solution NMR structure of the TGS domain of PG1808 from Porphyromonas gingivalis. Northeast Structural Genomics Consortium Target PgR122A (418-481)

Yang, Y., Ramelot, T.A., Cort, J.R., Lee, D., Ciccosanti, C., Hamilton, K., Nair, R., Rost, B., Acton, T.B., Xiao, R., Swapna, G., Everett, J.K., Montelione, G.T., Kennedy, M.A.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 8.12 kDa 
• Atom Count: 571 
• Modelled Residue Count: 73 
• Deposited Residue Count: 73 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase	A	73	Porphyromonas gingivalis	Mutation(s): 0  Gene Names: PG1808, PG_1808, spoT
UniProt
Find proteins for Q7MAV5 (Porphyromonas gingivalis (strain ATCC BAA-308 / W83)) Explore Q7MAV5  Go to UniProtKB:  Q7MAV5

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 150 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2009-11-10 
Deposition Author(s): Yang, Y., Ramelot, T.A., Cort, J.R., Lee, D., Ciccosanti, C., Hamilton, K., Nair, R., Rost, B., Acton, T.B., Xiao, R., Swapna, G., Everett, J.K., Montelione, G.T., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)

Revision History  

• Version 1.0: 2009-11-10
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2022-03-16
  Changes: Data collection, Database references, Derived calculations
• Version 1.3: 2024-05-22
  Changes: Data collection