Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with MSDC-0602
Shang, J., Kojetin, D.J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peroxisome proliferator-activated receptor gamma | 271 | Homo sapiens | Mutation(s): 0  Gene Names: PPARG, NR1C3 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P37231 (Homo sapiens) Explore P37231  Go to UniProtKB:  P37231 | |||||
PHAROS:  P37231 GTEx:  ENSG00000132170  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P37231 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GH1 Query on GH1 | C [auth A] | (5S)-5-({4-[2-(3-methoxyphenyl)-2-oxoethoxy]phenyl}methyl)-1,3-thiazolidine-2,4-dione C19 H17 N O5 S YAUMOGALQJYOJQ-KRWDZBQOSA-N | |||
KNA Query on KNA | D [auth A] | nonanoic acid C9 H18 O2 FBUKVWPVBMHYJY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 93.12 | α = 90 |
b = 60.2 | β = 103.59 |
c = 118.04 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
MOSFLM | data reduction |
SCALA | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK) | United States | R01DK101871 |