7ACB | pdb_00007acb

Covalent/noncovalent tetramer of Capra hircus Cathelicidin-1 in DPC (dodecylphosphocholine) micelles

• PDB DOI: https://doi.org/10.2210/pdb7ACB/pdb
• BMRB: 34558

• Classification: ANTIMICROBIAL PROTEIN
• Organism(s): Capra hircus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2020-09-10 Released: 2021-09-15 
• Deposition Author(s): Myshkin, M.Y., Mironov, P., Shenkarev, Z.O.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations 

Literature

Dodecapeptide Cathelicidins of Cetartiodactyla: Structure, Mechanism of Antimicrobial Action, and Synergistic Interaction With Other Cathelicidins

Bolosov, I.A., Panteleev, P.V., Sychev, S.V., Sukhanov, S.V., Mironov, P.A., Myshkin, M.Y., Shenkarev, Z.O., Ovchinnikova, T.V.

(2021) Front Microbiol 12: 2249

• DOI: https://doi.org/10.3389/fmicb.2021.725526

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 4-mer - A4 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 6.04 kDa 
• Atom Count: 412 
• Modelled Residue Count: 48 
• Deposited Residue Count: 48 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Capra hircus Cathelicidin-1 (dodecylphosphocholine)	A, B, C, D	12	Capra hircus	Mutation(s): 0
UniProt
Find proteins for W5VVI0 (Capra hircus) Explore W5VVI0  Go to UniProtKB:  W5VVI0

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2021-09-15 
Deposition Author(s): Myshkin, M.Y., Mironov, P., Shenkarev, Z.O.

Revision History  

• Version 1.0: 2021-09-15
  Type: Initial release
  
• Version 1.1: 2023-06-14
  Changes: Other
• Version 1.2: 2024-11-20
  Changes: Data collection, Database references, Structure summary