8ZI8

Terephthalate 1,2-cis-dihydrodioldehydrogenase/Decarboxylase in complex with 2,5-Dihydroxybenzoate.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.295 
  • R-Value Work: 0.260 

Starting Model: in silico
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wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Terephthalate 1,2-cis-dihydrodioldehydrogenase/Decarboxylase in complex with 2,5-Dihydroxybenzoate.

Kumar, K.A.Pahwa, D.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
4-hydroxythreonine-4-phosphate dehydrogenase
A, B, C, D
335Comamonas testosteroni KF-1Mutation(s): 0 
Gene Names: CtesDRAFT_PD2128
EC: 1.1.1.262
UniProt
Find proteins for B7WRJ7 (Comamonas testosteroni (strain DSM 14576 / KF-1))
Explore B7WRJ7 
Go to UniProtKB:  B7WRJ7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupB7WRJ7
Sequence Annotations
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  • Reference Sequence
Small Molecules
Ligands 5 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
GTQ
Query on GTQ

Download Ideal Coordinates CCD File 
F [auth A],
I [auth D]
2,5-dihydroxybenzoic acid
C7 H6 O4
WXTMDXOMEHJXQO-UHFFFAOYSA-N
ZN (Subject of Investigation/LOI)
Query on ZN

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G [auth A],
H [auth C],
M [auth D]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
EDO
Query on EDO

Download Ideal Coordinates CCD File 
K [auth D],
L [auth D]
1,2-ETHANEDIOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
CO2 (Subject of Investigation/LOI)
Query on CO2

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E [auth A],
J [auth D]
CARBON DIOXIDE
C O2
CURLTUGMZLYLDI-UHFFFAOYSA-N
CL
Query on CL

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N [auth D]CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.295 
  • R-Value Work: 0.260 
  • Space Group: P 2 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 86.549α = 90
b = 94.717β = 90
c = 166.714γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
CrysalisProdata reduction
Aimlessdata scaling
MOLREPphasing

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Department of Biotechnology (DBT, India)IndiaDBT-2271-BIO-CNA

Revision History  (Full details and data files)

  • Version 1.0: 2024-09-25
    Type: Initial release