9C6A

The CRISPR associated adenosine deaminase Cad1-CARF in the apo form


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.60 Å
  • R-Value Free: 0.317 
  • R-Value Work: 0.248 
  • R-Value Observed: 0.252 

Starting Model: in silico
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wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

The CRISPR associated adenosine deaminase Cad1 converts ATP to ITP to provide antiviral immunity

Majumder, P.Patel, D.J.Baca, C.F.Marraffini, L.A.Hickling, J.H.Ye, L.Brady, S.F.Teplova, M.

(2024) Cell 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Adenosine deaminase domain-containing protein
A, B, C, D
166Bacteroidales bacteriumMutation(s): 0 
Gene Names: DCM62_02910
UniProt
Find proteins for A0A3C0QUR5 (Bacteroidales bacterium)
Explore A0A3C0QUR5 
Go to UniProtKB:  A0A3C0QUR5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A3C0QUR5
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.60 Å
  • R-Value Free: 0.317 
  • R-Value Work: 0.248 
  • R-Value Observed: 0.252 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 53.615α = 90
b = 96.801β = 90
c = 155.722γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
Aimlessdata scaling
MOLREPphasing
HKL-2000data reduction

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesNIHGM129430, NIHGM145888

Revision History  (Full details and data files)

  • Version 1.0: 2024-10-30
    Type: Initial release