3DTU
TRD: TRIDECANE
TRD is a Ligand Of Interest in 3DTU designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
3DTU_TRD_A_1506 | 52% | 84% | 0.151 | 0.91 | 0.24 | 0.52 | - | - | 3 | 0 | 100% | 1 |
3DTU_TRD_C_577 | 45% | 86% | 0.144 | 0.873 | 0.29 | 0.42 | - | - | 1 | 0 | 100% | 1 |
3DTU_TRD_B_1023 | 33% | 87% | 0.128 | 0.858 | 0.25 | 0.45 | - | - | 1 | 0 | 69% | 0.6923 |
3DTU_TRD_D_7 | 31% | 81% | 0.203 | 0.874 | 0.24 | 0.57 | - | - | 2 | 0 | 100% | 1 |
3DTU_TRD_A_1504 | 28% | 85% | 0.193 | 0.845 | 0.28 | 0.45 | - | - | 4 | 0 | 100% | 1 |
3DTU_TRD_D_23 | 22% | 89% | 0.124 | 0.821 | 0.22 | 0.42 | - | - | 0 | 0 | 54% | 0.4038 |
3DTU_TRD_D_288 | 17% | 87% | 0.193 | 0.822 | 0.24 | 0.44 | - | - | 0 | 0 | 69% | 0.6923 |
3DTU_TRD_A_1010 | 15% | 84% | 0.215 | 0.803 | 0.25 | 0.51 | - | - | 0 | 0 | 85% | 0.6346 |
3DTU_TRD_B_1012 | 13% | 87% | 0.209 | 0.804 | 0.26 | 0.42 | - | - | 0 | 0 | 69% | 0.6923 |
3DTU_TRD_C_579 | 13% | 92% | 0.198 | 0.818 | 0.26 | 0.29 | - | - | 0 | 0 | 54% | 0.5385 |
3DTU_TRD_D_12 | 12% | 88% | 0.219 | 0.776 | 0.27 | 0.4 | - | - | 0 | 0 | 85% | 0.6346 |
3DTU_TRD_B_1031 | 11% | 89% | 0.22 | 0.797 | 0.27 | 0.37 | - | - | 0 | 0 | 69% | 0.6923 |
3DTU_TRD_C_578 | 9% | 88% | 0.204 | 0.717 | 0.29 | 0.38 | - | - | 0 | 0 | 85% | 0.8462 |
3DTU_TRD_A_1015 | 8% | 83% | 0.167 | 0.659 | 0.27 | 0.5 | - | - | 0 | 0 | 85% | 0.6346 |
3DTU_TRD_C_583 | 7% | 88% | 0.269 | 0.816 | 0.22 | 0.43 | - | - | 0 | 0 | 54% | 0.5385 |
3DTU_TRD_C_580 | 7% | 86% | 0.193 | 0.699 | 0.26 | 0.45 | - | - | 0 | 0 | 69% | 0.5192 |
3DTU_TRD_C_584 | 6% | 87% | 0.345 | 0.868 | 0.12 | 0.56 | - | - | 12 | 0 | 54% | 0.5385 |
3DTU_TRD_C_582 | 5% | 89% | 0.195 | 0.695 | 0.25 | 0.38 | - | - | 0 | 0 | 54% | 0.4038 |
3DTU_TRD_A_1009 | 5% | 89% | 0.254 | 0.748 | 0.24 | 0.39 | - | - | 0 | 0 | 54% | 0.5385 |
3DTU_TRD_A_1505 | 5% | 85% | 0.21 | 0.641 | 0.26 | 0.47 | - | - | 0 | 0 | 85% | 0.6346 |
3DTU_TRD_A_1013 | 4% | 91% | 0.254 | 0.718 | 0.27 | 0.3 | - | - | 0 | 0 | 54% | 0.5385 |
3DTU_TRD_A_1014 | 1% | 89% | 0.364 | 0.663 | 0.22 | 0.41 | - | - | 0 | 0 | 54% | 0.4038 |
3DTU_TRD_C_581 | 1% | 83% | 0.262 | 0.466 | 0.27 | 0.5 | - | - | 0 | 0 | 85% | 0.6346 |
6PW1_TRD_C_601 | 71% | 72% | 0.099 | 0.918 | 0.15 | 0.92 | - | - | 1 | 0 | 100% | 1 |
6PW0_TRD_D_302 | 43% | 73% | 0.196 | 0.921 | 0.12 | 0.9 | - | - | 0 | 0 | 100% | 1 |
3FYE_TRD_D_1007 | 29% | 81% | 0.221 | 0.881 | 0.23 | 0.59 | - | - | 1 | 0 | 100% | 1 |
3FYI_TRD_A_578 | 28% | 82% | 0.245 | 0.9 | 0.28 | 0.52 | - | - | 0 | 0 | 100% | 1 |
6CI0_TRD_A_613 | 22% | 77% | 0.215 | 0.834 | 0.12 | 0.79 | - | - | 0 | 0 | 100% | 1 |
4ZR1_TRD_A_410 | 49% | 75% | 0.18 | 0.926 | 0.12 | 0.84 | - | - | 1 | 0 | 100% | 1 |
6LPK_TRD_A_2422 | 41% | 98% | 0.14 | 0.853 | 0.14 | 0.14 | - | - | 0 | 0 | 100% | 1 |
6LPJ_TRD_A_2422 | 38% | 98% | 0.154 | 0.855 | 0.13 | 0.16 | - | - | 0 | 0 | 100% | 1 |