Ligand validation:3VED

HEM: PROTOPORPHYRIN IX CONTAINING FE

HEM is a Ligand Of Interest in 3VED designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3VED_HEM_B_401	88%	19%	0.11	0.987	1.79	1.68	4	12	2	0	100%	1
3VED_HEM_C_401	86%	17%	0.114	0.984	1.82	1.78	5	9	0	0	100%	1
3VED_HEM_A_401	83%	20%	0.129	0.989	1.85	1.56	4	9	0	0	100%	1
3QNS_HEM_A_351	96%	26%	0.084	0.993	1.53	1.49	5	9	0	0	100%	1
4HOV_HEM_B_401	91%	23%	0.101	0.986	1.2	1.98	5	13	0	0	100%	1
3QNR_HEM_C_400	90%	18%	0.098	0.982	1.83	1.71	6	9	0	0	100%	1
3VEE_HEM_C_401	89%	19%	0.109	0.987	1.87	1.62	7	9	2	0	100%	1
3VEC_HEM_A_401	87%	4%	0.118	0.992	2.5	2.98	16	22	1	0	100%	1
1FHF_HEM_A_350	100%	17%	0.021	0.997	1.8	1.82	12	3	4	0	100%	1
1HBH_HEM_A_144	100%	11%	0.019	0.997	1.48	2.62	5	12	5	0	100%	1
2D2C_HEM_A_301	100%	9%	0.024	0.999	2.2	2.28	9	12	4	0	100%	1
3EJD_HEM_B_405	100%	17%	0.018	0.998	1.9	1.69	6	8	2	0	100%	1
3EJE_HEM_B_405	100%	18%	0.022	0.997	1.91	1.6	8	8	7	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.