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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Roy Burman, S.S."

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Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Homo sapiens (10)
	Escherichia coli (3)
	Saccharomyces cerevisiae (1)

Taxonomy

	Eukaryota (10)
	Bacteria (3)

Experimental Method

	ELECTRON MICROSCOPY (9)
	X-RAY DIFFRACTION (1)

Polymer Entity Type

	Protein (10)
	RNA (2)

Refinement Resolution (Å)

	2.0 - 2.5 (1)
	2.5 - 3.0 (2)
	3.0 - 3.5 (3)
	3.5 - 4.0 (3)
	> 4.5 (1)

Release Date

2020 - 2024 (10)

Enzyme Classification Name

Transferases (3)

Symmetry Type

	Asymmetric (7)
	Cyclic (2)
	Helical (1)

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1 to 10 of 10 Structures

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6XMX \| pdb_00006xmx	Download File View File

Cryo-EM structure of BCL6 bound to BI-3802

Yoon, H., Burman, S.S.R., Hunkeler, M., Nowak, R.P., Fischer, E.S.

(2020) Nature 588: 164-168

Released	2020-11-25
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Homo sapiens
Macromolecule	B-cell lymphoma 6 protein (protein)
Unique Ligands	U52

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7U20 \| pdb_00007u20	Download File View File

Crystal structure of human METTL1 and WDR4 complex

Li, J., Nowak, R.P., Fischer, E.S., Gregory, R.

(2023) Nature 613: 391-397

Released	2022-12-07
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	tRNA (guanine-N(7)-)-methyltransferase (protein) tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 (protein)
Unique Ligands	SO4

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8CTH \| pdb_00008cth	Download File View File

Cryo-EM structure of human METTL1-WDR4-tRNA(Phe) complex

Li, J., Wang, L., Fontana, P., Hunkeler, M., Roy-Burman, S.S., Wu, H., Fishcer, E.S., Gregory, R.I.

(2023) Nature 613: 391-397

Released	2022-12-07
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Homo sapiens Saccharomyces cerevisiae
Macromolecule	tRNA (guanine-N(7)-)-methyltransferase (protein) tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 (protein) Phe-tRNA (nucleic acid)
Unique Ligands	SAH

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8CTI \| pdb_00008cti	Download File View File

Cryo-EM structure of human METTL1-WDR4-tRNA(Val) complex

Li, J., Wang, L., Fontana, P., Hunkeler, M., Roy-Burman, S.S., Wu, H., Fischer, E.S., Gregory, R.I.

(2023) Nature 613: 391-397

Released	2022-12-07
Method	ELECTRON MICROSCOPY 3.6 Å
Organisms	Homo sapiens
Macromolecule	tRNA (guanine-N(7)-)-methyltransferase (protein) tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 (protein) tRNA-Val-TAC-2-1 (nucleic acid)

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8TL6 \| pdb_00008tl6	Download File View File

Cryo-EM structure of DDB1deltaB-DDA1-DCAF5

Yue, H., Hunkeler, M., Roy Burman, S.S., Fischer, E.S.

(2024) Nature 628: 442-449

Released	2024-04-03
Method	ELECTRON MICROSCOPY 2.63 Å
Organisms	Homo sapiens
Macromolecule	DDB1- and CUL4-associated factor 5 (protein) DET1- and DDB1-associated protein 1 (protein) DNA damage-binding protein 1 (protein)

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8TNP \| pdb_00008tnp	Download File View File

Cryo-EM structure of DDB1dB:CRBN:Pomalidomide:SD40

Roy Burman, S.S., Hunkeler, M., Fischer, E.S.

(2024) Science 383: eadk4422-eadk4422

Released	2024-03-13
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Escherichia coli Homo sapiens
Macromolecule	DNA damage-binding protein 1 (protein) Maltose/maltodextrin-binding periplasmic protein,SD40 (protein) Protein cereblon (protein)
Unique Ligands	Y70, ZN

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8TNQ \| pdb_00008tnq	Download File View File

Cryo-EM structure of DDB1dB:CRBN:PT-179:SD40, conformation 1

Roy Burman, S.S., Hunkeler, M., Fischer, E.S.

(2024) Science 383: eadk4422-eadk4422

Released	2024-03-13
Method	ELECTRON MICROSCOPY 2.41 Å
Organisms	Escherichia coli Homo sapiens
Macromolecule	DNA damage-binding protein 1 (protein) Maltose/maltodextrin-binding periplasmic protein,SD40 (protein) Protein cereblon (protein)
Unique Ligands	MIQ, ZN

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8TNR \| pdb_00008tnr	Download File View File

Cryo-EM structure of DDB1dB:CRBN:PT-179:SD40, conformation 2

Roy Burman, S.S., Hunkeler, M., Fischer, E.S.

(2024) Science 383: eadk4422-eadk4422

Released	2024-03-13
Method	ELECTRON MICROSCOPY 2.5 Å
Organisms	Escherichia coli Homo sapiens
Macromolecule	DNA damage-binding protein 1 (protein) Maltose/maltodextrin-binding periplasmic protein,SD40 (protein) Protein cereblon (protein)
Unique Ligands	MIQ, ZN