2MIQ | pdb_00002miq

Solution NMR Structure of PHD Type 1 Zinc Finger Domain 1 of Lysine-specific Demethylase Lid from Drosophila melanogaster, Northeast Structural Genomics Consortium (NESG) Target FR824J

• PDB DOI: https://doi.org/10.2210/pdb2MIQ/pdb
• BMRB: 19682

• Classification: OXIDOREDUCTASE
• Organism(s): Drosophila melanogaster
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2013-12-17 Released: 2014-01-29 
• Deposition Author(s): Xu, X., Eletsky, A., Shastry, R., Maglaqui, M., Janjua, H., Xiao, R., Everett, J.K., Sukumaran, D.K., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG), Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Literature

Solution NMR Structure of PHD Type 1 Zinc Finger Domain 1 from Lysine-specific Demethylase Lid from Drosophila melanogaster, Northeast Structural Genomics Consortium (NESG) Target FR824J

Xu, X., Eletsky, A., Shastry, R., Maglaqui, M., Janjua, H., Xiao, R., Everett, J.K., Sukumaran, D., Montelione, G.T., Szyperski, T.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 10.23 kDa 
• Atom Count: 702 
• Modelled Residue Count: 94 
• Deposited Residue Count: 94 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Lysine-specific demethylase lid	A	94	Drosophila melanogaster	Mutation(s): 0  Gene Names: CG9088, lid EC: 1.14.11 (PDB Primary Data), 1.14.11.67 (UniProt)
UniProt
Find proteins for Q9VMJ7 (Drosophila melanogaster) Explore Q9VMJ7  Go to UniProtKB:  Q9VMJ7

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A], C [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2014-01-29 
Deposition Author(s): Xu, X., Eletsky, A., Shastry, R., Maglaqui, M., Janjua, H., Xiao, R., Everett, J.K., Sukumaran, D.K., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG), Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)

Revision History  

• Version 1.0: 2014-01-29
  Type: Initial release
  
• Version 1.1: 2014-02-19
  Changes: Structure summary
• Version 1.2: 2014-04-23
  Changes: Database references, Structure summary
• Version 1.3: 2023-06-14
  Changes: Data collection, Database references, Derived calculations, Other
• Version 1.4: 2024-11-06
  Changes: Data collection, Database references, Structure summary