9BW1

TnsABCD-DNA transpososome


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G [auth J]PF06527TniQ (TniQ)TniQ- Family
PF09299Mu transposase, C-terminal (Mu-transpos_C)Mu transposase, C-terminalMembers of this family are found in various prokaryotic integrases and transposases. They adopt a beta-barrel structure with Greek-key topology [1].Domain
PF08721TnsA endonuclease C terminal (Tn7_Tnp_TnsA_C)TnsA endonuclease C terminalThe Tn7 transposase is composed of proteins TnsA and TnsB. DNA breakage at the 5' end of the transposon is carried out by TnsA, and breakage and joining at the 3' end is carried out by TnsB. The C terminal domain of TnsA binds DNA.Domain
PF08722TnsA-like endonuclease N terminal (Tn7_TnsA-like_N)TnsA-like endonuclease N terminalThe Tn7 transposase is composed of proteins TnsA and TnsB. DNA breakage at the 5' end of the transposon is carried out by TnsA, and breakage and joining at the 3' end is carried out by TnsB. The N terminal domain of TnsA is catalytic [1,2]. This dom ...The Tn7 transposase is composed of proteins TnsA and TnsB. DNA breakage at the 5' end of the transposon is carried out by TnsA, and breakage and joining at the 3' end is carried out by TnsB. The N terminal domain of TnsA is catalytic [1,2]. This domain is also found in Bacteriophage T4 gp4-like head completion protein whose nuclease activity is required for packaging [3,4]. This domain contains the catalytic triad of one basic and two acidic residues that form a restriction endonuclease-like active site and conserved between TnsA with gp4 proteins [3].
Domain
PF13401AAA domain (AAA_22)AAA domain- Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
G [auth J]IPR001387Cro/C1-type helix-turn-helix domainDomain
G [auth J]IPR009492TniQFamily
IPR036397Ribonuclease H superfamilyHomologous Superfamily
IPR001584Integrase, catalytic coreDomain
IPR014832TnsA endonuclease C-terminalDomain
IPR014833TnsA endonuclease, N-terminalDomain
IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
IPR015378Transposase-like, Mu, C-terminalDomain
IPR049945ORC1/DEAH AAA+ ATPase domainDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily